Puntigrus tetrazona (Sumatra barb): 122354430
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Entry
122354430 CDS
T08985
Symbol
pcdh17
Name
(RefSeq) protocadherin-17
KO
K16499
protocadherin delta 2
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ptet04515
]
122354430 (pcdh17)
Cell adhesion molecules [BR:
ptet04515
]
Cadherins
Protocadherins
122354430 (pcdh17)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
PepSY
Cadherin_C_2
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
122354430
NCBI-ProteinID:
XP_043108547
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All DBs
Position
11:complement(24042784..24108247)
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AA seq
1137 aa
AA seq
DB search
MHLSVFLFLLLWAQALTLKNLNYSIPEEKIQGVIGNIAKDAELELGEQGKKSNFRVLENS
APHLIDVDPESGLLYTKQRIDRETLCRQNTKCQLSMEVFANDKEICMIKVEIQDINDNAP
SFPSEQIDIDISENAAPGTRFPLAAAYDPDTKENGLKTYQITRDDYSIFSLDVKSRGDGT
KFPELVVQRSLDREERSHHTLIITATDGGEYPKSGTMQINVKVTDSNDNSPVFEQPSYVV
EIPENSPLGMVLIDLNATDPDEGINGQVTYSFSCYVPDRIKELFSIDPRTGVIKIQGKID
FEENPIIEIDVQAKDQGPNPIPGHCKVTVKVLDRNDNWPSIGFVAVRQGAVSEAATPGTV
IALVRVTDKDSGRNGQLQCRILGNVPFKLEENYDNFYTVVTDRPLDREVKDEYNITIVAK
DNGNPPLNSTKSFTVKILDENDNAPRFTKMVYLLQVPENNIPGEYLGSVLAHDPDLGQNG
TVSYSLLPSNVSEESITTYVNIKPTDGAIYALRSFNYEQTKYFDFKVQAKDSGNPHLESN
TTVRVSVLDVNDNIPVIVLPLLQNDTAEIHVPRNVGVGHIITTVRAVDNDFGESGRLTYE
ISDGNEEHLFEIDSVTGEVRTAQPLWEEVAPVVELIIKVTDHGKPSLSAMAKLIVKAYSG
PLPEGEPRINAEHHNWDMSLPLIVTLSIISIMLLAAMITIAVKCKRENKEIRTYNCRIAE
YTHPQLGKGKKKKINKNDIMLVQSEVEERDTMNVMNVVSSPSLATSPMYFDYQTRLPLSS
PRSEVMYLKPTANNLSVPQGHVGCHTSFTGPVTNTTETPVNRMSIIQTDNFPAEPNYMGN
RQQFVQSSSTFKDPERASLRDSGHGDSDQADSDQDTNKGSCCDMSAKEALKMKATGLKPQ
PLEQEEDCVNCTEECRVLGHSDRCWMPQFPAGAGGAGTPQAESSDYRTNLFVPAGMEAVA
VETETYETVCNPNGKKTFCTFGKERRDHTILVANVKPYLKTKRALSPLLQEVPSASCSPT
KGCSTGSPCSSAKGMGDGAEGKPSTSHYGPPDGQYISPNKQNKEQGYSTLPPSDPVAKVL
AEARSRISQETAVEMDSVLEQGGGEMGRGTMDADQVVRDIDKLLQDCRGNENTPIRK
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgcatctttctgttttccttttcctacttttatgggcgcaagccctgacattgaaaaac
ttaaactactcaatacctgaggagaaaatacagggcgtcattggaaacattgccaaggat
gcggagctggaactgggagagcaggggaaaaaatccaactttagggtgttggagaactcc
gccccacaccttattgacgtggatcccgaaagtgggctattatacactaaacagcggatc
gacagagaaacactgtgcagacaaaacaccaagtgccagctctctatggaagtgtttgcc
aacgacaaggagatctgcatgattaaagttgagatacaggacataaatgacaacgcacca
agctttccttctgaacagattgatatcgacatatctgagaacgcagccccaggcacacgt
ttccctttggctgctgcctatgaccctgacactaaggagaacggcctgaaaacatatcaa
atcacgcgggatgattatagcatattctctctggatgttaaatccagaggggatggaacc
aaattccctgaattggtcgttcagaggtctttagatcgagaggaacgtagccatcacact
ttaattataactgccacagacggaggggaatatcccaaatcaggcacaatgcaaattaat
gtaaaagtcactgattccaatgacaacagccccgtgtttgaacagccctcatatgtcgtg
gagatccccgagaattcacccctaggcatggtactgatagatttaaacgctaccgatcct
gatgaagggattaatggacaagttacttattcctttagctgctatgttccagacaggatc
aaagagttgttctcaatagacccccgaacgggtgtcataaagattcagggtaaaatcgac
tttgaggagaacccaattatagagattgatgttcaggcaaaggatcaaggccccaaccca
attcctggccattgtaaagtcactgttaaagtgcttgacaggaatgacaactggccatcg
ataggtttcgtagctgtgcgtcagggggcggttagtgaagcagcaaccccagggacagtg
atcgcactcgtcagagtcacagacaaagactcaggccgcaatgggcaactccaatgtaga
attttggggaacgtacctttcaagctggaggagaactacgataacttctacacagtagtg
actgacagacccctggacagagaggtaaaggacgagtataacatcactattgtggcaaaa
gacaacggcaacccacccctgaactcaacaaagtctttcactgttaagatcttagatgaa
aacgacaatgcaccacgcttcacaaaaatggtctaccttctccaggtgcctgaaaacaac
atcccaggggaataccttggttctgttcttgcgcatgacccagatttgggccaaaatggt
actgtatcgtattccctccttccttcaaatgttagcgaggagtctatcactacatatgtt
aacatcaaacccactgacggtgcaatttatgccctgaggagcttcaactatgaacaaacc
aagtatttcgacttcaaggtccaagcgaaggattcaggtaaccctcacctggagagcaac
accactgtccgtgtcagcgtgctggatgttaacgataacattcctgtcattgtccttccg
ttacttcagaatgacactgctgagatccatgtgcctcggaatgtgggagttggacacatt
atcaccaccgtgagagcggtggacaacgattttggcgagagcgggcgcctcacctacgag
atctcagatggaaacgaggagcacttgtttgagattgattcggtgacgggtgaggtacgg
acagcccagccactttgggaggaggtggcacctgttgtggaactcatcatcaaggtgact
gatcatggcaagccgtcactgtccgccatggccaaacttatcgtcaaagcctactccggg
cccttaccagagggtgaaccacgcatcaacgcagaacaccataactgggacatgtcgctc
ccgctaatagtaaccctgagtatcatctcaattatgctccttgctgccatgatcaccata
gcagtcaagtgtaaacgggaaaataaggagatccgcacatacaactgtcggatcgcagag
tacactcacccacaacttggcaagggaaagaagaagaagatcaacaagaatgacatcatg
ctggtgcagagcgaagtggaggagcgggacaccatgaacgtgatgaacgttgtcagcagt
ccctccctggccacctctcccatgtactttgactaccaaactcgtttgcccctcagctct
cctaggtcagaggtcatgtacctcaaacccacagccaacaacctcagtgttcctcaaggg
cacgttggctgtcacaccagtttcacaggacctgttacgaacaccaccgagacgccagtg
aacaggatgtcaataatacagacagacaattttcctgctgagcccaattacatgggtaac
aggcagcagtttgttcaaagcagctccacgttcaaagatccagagcgagccagtctcaga
gacagcggccatggtgacagcgaccaagcggatagtgatcaggacactaataaaggctcc
tgctgtgacatgtcagctaaggaagcgctcaagatgaaggccactggcctcaagcctcaa
ccacttgagcaggaggaggactgtgtgaactgcacggaggagtgtcgagtgctgggtcac
tctgaccgttgttggatgccccagtttcccgcaggggctggaggagcaggaactccccaa
gccgagagctcggactaccgcaccaacctcttcgtaccagccggcatggaggcggtcgca
gtggaaactgaaacttacgagacggtgtgcaaccccaatggcaaaaaaactttctgcaca
ttcgggaaggagcgtcgagaccacaccatcctcgtggcgaatgttaaaccttacctaaag
accaaacgtgccctcagccctctcttgcaggaggttccatctgcctcatgtagcccaacc
aaaggctgcagtacaggttccccgtgctcttcagccaaagggatgggtgacggagccgag
ggtaaacccagcaccagccactacggaccccctgatggacagtacatctctccgaacaag
caaaacaaagagcagggctactctacgctgcctccctccgaccccgtagccaaagtcctg
gctgaagcacgttcgcggatcagccaggagacggcggtggaaatggacagcgttttggag
cagggcggaggagagatgggccgcggcaccatggacgcagaccaggtggtcagagacatc
gacaaactgctgcaggattgtcggggaaacgaaaacacccccatcagaaagtaa
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