Puntigrus tetrazona (Sumatra barb): 122354660
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Entry
122354660 CDS
T08985
Name
(RefSeq) red-sensitive opsin
KO
K04251
long/medium wavelength-sensitive opsin
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ptet04030
]
122354660
G protein-coupled receptors [BR:
ptet04030
]
Rhodopsin family
Vision
Opsin
122354660
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srw
7TM_GPCR_Srt
Cytochrom_B_N_2
MpPF26
7tm_4
TMEM154
Motif
Other DBs
NCBI-GeneID:
122354660
NCBI-ProteinID:
XP_043108868
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Position
11:21064334..21066115
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AA seq
357 aa
AA seq
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MAEQWGDAIFAARRRGDESTRETMFVYTNSNNTKDPFEGPNYHIAPRWVYNIATVWMFFV
VFASTFTNGLVLVATAKFKKLHHPLNWILVNLAIADLGETLLASTISVINQIFGYFVLGH
PMCIFEGYTVSVCGIAGLWSLTVISWERWVVVCKPFGNVKFDAKWASGGIIFSWVWAAFW
CAPPIFGWSRYWPHGLKTSCGPDVFSGSEDPGVQSFMIVLMITCCIIPLAIIILCYIAVW
LAIRAVAQQQKDSESTQKAEKEVSRMVVVMILAYCVCWGPYTFFACFAAANPGYAFHPLA
AAMPAYFAKSATIYNPIIYVFMNRQFRVCIMQLFGKKVDDGSEVSTSKTEVSSVAPA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcagtggggagacgcaatctttgcagccaggcgaagaggagatgaatcgacg
agggaaacaatgtttgtatataccaacagcaataacaccaaggatccctttgagggaccc
aactaccacattgcccctcgatgggtgtacaacatagcgacagtatggatgttctttgtg
gtctttgcctccaccttcaccaatggtctggtgctggtggccacggccaaatttaagaag
cttcatcaccctcttaactggattctggtgaacctcgctatagctgatctaggagaaact
cttttggccagtaccatcagtgtcatcaaccagatattcggctattttgtccttggacac
cccatgtgtatttttgagggctacaccgtgtctgtatgtggtatcgctggtctgtggtct
ttgactgtgatctcttgggaaagatgggtggttgtctgcaaaccatttggaaatgtcaag
tttgatgcaaaatgggcatctggtggtatcatcttctcctgggtttgggctgctttctgg
tgtgcaccccccatctttggctggagcagatactggcctcacggtctaaagacctcctgc
gggcctgatgtcttcagtggaagcgaggaccctggtgtccagtccttcatgattgtcctg
atgatcacctgctgtatcatccctctggccattatcattctctgctacattgctgtgtgg
ttggccattcgtgctgtagcccagcagcagaaggattctgagtccacacagaaagcagag
aaggaagtgtccagaatggtagttgtcatgatcctggcttactgtgtttgctggggacct
tacacattcttcgcctgctttgctgctgcaaacccaggctatgccttccacccactggca
gcagccatgcctgcctactttgccaagagcgccaccatctacaaccccatcatttatgtg
ttcatgaaccgacagtttcgtgtatgcatcatgcagctctttggaaagaaggtggatgat
ggctctgaggtgtctacatccaagacagaagtgtcttctgtggctcctgcataa
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