Puntigrus tetrazona (Sumatra barb): 122355164
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Entry
122355164 CDS
T08985
Symbol
srsf2a
Name
(RefSeq) serine and arginine rich splicing factor 2a
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03040
Spliceosome
ptet05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122355164 (srsf2a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122355164 (srsf2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptet03041
]
122355164 (srsf2a)
Spliceosome [BR:
ptet03041
]
Common components
Common spliceosomal components
SR proteins
122355164 (srsf2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBD_AKAP-17A
RRM_PARP14_3
RRM_3
RRM_occluded
RRM_8
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
122355164
NCBI-ProteinID:
XP_043109133
LinkDB
All DBs
Position
12:complement(13972882..13976511)
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AA seq
224 aa
AA seq
DB search
MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV
RFHDKRDAEDAMDAMDGALLDGRELRVQMARYGRPPDSHYGRRGAPPRRYGGHGRRSRSR
SPRRRRHSRSRSRSRSRSRSRSRSRYSRSRSRSYSRSRSRSRSRSKTRTPRRSKSKSASR
SRSRSKSKSRSRSRTPRSNKGSKSRSRSRSRPKSPEDTGATAES
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgagttacggtagacctccgcccgacgtcgagggcatgacatctttaaaagtcgataat
ctgacgtaccgcacgtctcccgaaacgctgcggcgggttttcgaaaagtacggccgcgtc
ggggacgtctacatcccgagggaccggtacacgaaagagagccgcgggttcgcctttgtc
cgttttcatgacaagcgcgacgcagaggacgcgatggacgcaatggacggcgcgctgctg
gacgggcgcgaactgcgcgtgcagatggcgcgatacggccgcccgccagattcgcattac
ggccgccgcggagccccaccgaggaggtatggggggcatggacggagaagccgaagccgt
agtcctcggcgcaggaggcacagcagatctaggtccaggagcaggagccggtcccgctcc
cgtagcagatcccgctacagccgatccagatccaggtcctactcccgttcccggtctagg
tcccgttcccgctccaaaacccgcacaccacgcagaagcaagtccaaatcggcttccagg
tcccgttcgaggtctaagtccaagtctcgctccaggagccgtactcccaggtccaacaaa
ggatccaaatcgcgatccagatcgagaagcagacccaaatctccagaggatactggagca
actgctgaatcctga
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