Puntigrus tetrazona (Sumatra barb): 122355181
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Entry
122355181 CDS
T08985
Symbol
trub1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptet03016
]
122355181 (trub1)
Enzymes [BR:
ptet01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
122355181 (trub1)
Transfer RNA biogenesis [BR:
ptet03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
122355181 (trub1)
Prokaryotic type
122355181 (trub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
122355181
NCBI-ProteinID:
XP_043109164
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All DBs
Position
12:complement(13199764..13202870)
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AA seq
286 aa
AA seq
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MAVQSSSLSKLQSLNGIFAIYKKQGPTSADVLNSLKKVLLKEAGVANPNPRKRKNQPLKI
GHGGTLDSNASGVLVVGIGEGTKMLTTMLAGSKKYRAVGELGKATDTLDVTGNVVEEKSY
DHITKDAFEEKLKQFTGEIMQVPPLYSALKKDGQRMSVLLKQGQEVEAKPARLVTVYSLT
LQDFSPPYFTLDVECGGGFYVRSLVDDLAKALSSCAHIKDLTRTKQGQFTLDEHTLKEDR
WTWTDISQALQPCPEPSGQQKNAKKAKSKHKSIASKSEVDNGDQND
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggctgtacagagcagttcgctatccaaattgcagtctttaaatggcatatttgccatt
tataagaagcagggtcccacctccgcggacgtgttaaactcactgaagaaggtgctttta
aaagaggcaggtgtcgcaaatcccaatcctcgcaaaaggaagaatcaacctttaaaaatt
ggccatggtggcaccctggacagcaatgcttctggtgtacttgtggttggaattggtgaa
ggaacaaagatgcttaccacgatgcttgcaggatcaaagaaatacagagccgttggagag
ttaggcaaagcaactgatacgcttgacgtcacaggaaatgttgtcgaagagaaaagttat
gatcacatcacaaaagatgcttttgaagagaagctgaagcagtttactggtgaaattatg
caggttccgcctctatattcagcactgaagaaggacggccagcgcatgtctgtactgctc
aagcaaggtcaagaggttgaggctaaacctgcacgtctagtcacagtgtacagtctgact
ttacaggacttcagcccgccatatttcaccttagatgttgagtgtggaggtgggttttat
gtcagaagcttggttgatgatcttgcaaaagctctgtcatcctgtgctcacatcaaggac
ctcactcggaccaagcaggggcagttcaccctggacgagcacacattgaaggaggatcgc
tggacgtggaccgatatttcacaggctctgcagccctgcccagagccatcggggcagcaa
aagaatgccaaaaaagctaaatcaaagcataagtccattgcatctaaatctgaggttgac
aatggagatcaaaacgattaa
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