Puntigrus tetrazona (Sumatra barb): 122355367
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Entry
122355367 CDS
T08985
Symbol
mgrn1a
Name
(RefSeq) probable E3 ubiquitin-protein ligase MGRN1 isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04120
Ubiquitin mediated proteolysis
ptet04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122355367 (mgrn1a)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
122355367 (mgrn1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptet04121
]
122355367 (mgrn1a)
Enzymes [BR:
ptet01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122355367 (mgrn1a)
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122355367 (mgrn1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_3
RNF157-like_N
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
122355367
NCBI-ProteinID:
XP_043109483
LinkDB
All DBs
Position
12:complement(8267774..8278165)
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AA seq
554 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFTSHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDSDSTPEDTGDPRVLYSV
EFCFDTDARVAITLYCQAFEEFANGMAIYSPKSPSMVSETVHYKRGINQQFSLPSFKIDF
TKWKPEELNFDLDKGVFPLVVQAIVDDGDDVTGHAHVLLAAFERHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENRNNQETKSTEDENSDNSSECVVCLSDLRDTLILPCRHLCLCNAC
ADTLRYQANNCPICRLPFRALLQIRAVRKKTAATLSPVSFSPVLSQSSEHTEHSNADNIP
PGYEPISLLEALNGVQPVSPSIPSAPLYEEIQFSGEMGDPLNLTGRQQNADTTAMKGKGS
KSPDGSTRSPSSPIQEEEDEERMSELSDAQPQSVLPCSISPTEATVEGVPTKPGFPNSGS
ESRSLGVSVSEILQDCHSERSSLSRTESDPSADLALPGSSESIESLKSQSTSSSSQPLLC
LPSTLHMEDERLPS
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgatactgagcaggaggattgctggagttgaagatatcgatattcaagccaat
tcggcgtacagatatccccccaaatcaggaaattatttcaccagccattttttcatggga
ggagaaaagtttgacaccccccatccagaggggtatctttttggagaaaatatggatttg
aatttcctaggcaacagacctgtgcagtttccatatgtgacaccagcaccgcatgagcct
gtgaaaacactgaggagtttggtgaacatcaggaaggattctttacgacttgtcaggtat
aaggatgattctgacagcacaccagaggatacaggagatcccagggttctctacagtgtc
gaattctgctttgataccgatgccagagtggctattacattgtactgtcaggcctttgag
gagtttgccaatgggatggcaatatacagccccaagagcccttcaatggtgtctgagacg
gtccattataagagagggataaatcagcaattttctctaccgtccttcaagattgatttc
accaaatggaaacctgaagagctgaactttgatctggacaaaggcgttttccctttggtg
gtccaagcaatagtggatgatggagatgacgtcaccgggcatgcacatgttctcttggca
gctttcgaaaggcatgttgatggcagtttctcagtgaagcctctgaaacaaaagcaaatt
gtggaccgtgtgagctatctgctgcaagagatttacggcattgaaaaccggaacaatcag
gagacaaagtccactgaggacgagaacagtgacaacagcagcgagtgtgtggtttgttta
tcagacctgcgtgacacactcattctcccttgcaggcacctgtgtctgtgcaatgcctgt
gctgacacactgcgttaccaagccaacaactgccctatctgcagactgccattcagagcc
ctgctccagattcgagccgtgaggaagaaaacagccgccactctttcaccagtttccttc
agcccagtgctgtcccagagctctgagcatactgagcactcgaatgccgacaacatccct
cctggctatgagcccatctcactgctggaagccctgaatggggtgcaacccgtgtcccct
tcaatcccatcagcacctctctatgaggagatccagttttctggggagatgggggatcct
cttaacctgaccgggcggcagcagaacgcagacaccacagcgatgaaaggcaaaggtagc
aagtcaccggatgggtctacacgttctccctcatccccaatacaagaggaggaagatgag
gagaggatgtcggagctctctgatgcccagcctcagtctgttctgccctgtagtatcagt
cccactgaggccacggtagagggtgtgcccaccaaacctggattcccaaattcaggttca
gagagcagatccctgggtgtgtctgtgagcgaaatcctgcaggactgccacagtgagcgc
agcagcctgagccggacagaaagtgacccctcagcagatctggccctgcctgggtcgtcg
gagtctatagaaagcctgaagagtcagagcaccagcagctccagtcagcccctgctctgc
ctccccagcaccctgcacatggaagatgagcggctcccttcataa
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