Puntigrus tetrazona (Sumatra barb): 122355408
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Entry
122355408 CDS
T08985
Symbol
med1
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 1
KO
K15144
mediator of RNA polymerase II transcription subunit 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptet03021
]
122355408 (med1)
Transcription machinery [BR:
ptet03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
122355408 (med1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med1
SART-1
Motif
Other DBs
NCBI-GeneID:
122355408
NCBI-ProteinID:
XP_043109583
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All DBs
Position
12:5840203..5863290
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AA seq
1772 aa
AA seq
DB search
MAAVRSSSPGADTSHSSTAAVSERLRAEDGSESEKHSRMTGLLERLHSKHNSSRSWQETC
KVVRQAMEKRGVNNTAGHQLLLNSLETLQRALKVSSLPSMTDRLESIARQNMLGSHLSPS
RTECYITSDMFYVEVHLDKVGKLVDVKVAHHGENPVSCPELIQHLRNKNFDEFSKHLKGL
VNLYKLPGDNKLKTKMYLALQSLELDLTKMMHMFRIATNANSVETILHGSVGLLMARSGG
HLVSLQCYVSPNDIFEEGTGAQLNYTDVNIPRTLGVSVSVTVEGTTSVYKLPIAPLITGS
HPVDNKGTPSFSSVTNSNCVDLPACFFLKMNRLMPFSLSYIQKMGSTTGIPVFETAPTLF
PLYDLIIKSQLHEEGEASPPSLAKSINFYASLPGQQHCYFLNGDAPVQDGRSLQGTYVSK
IPFRHPAQVPALLDIIRHQAAYNTLIGSCVKKTYIKEDTPGLLQFEVCPLTDSSFSVSFQ
HPVNESLVCVVMEVIDSRQVACKLYKGLSDALICTDDFITKVVQRCMSIPVTMRAIRRKA
ETIQADTPALSLIAETVEIMVKKNLPPTGSPGYMGMGTGPDGSNPVGLPGLNNGTNSAGG
NSVVGVGGSGTFQGPITSLFNMGRTGQGGSCVDTIGQVGGQQQTMQHQQTQSHGSDDFSK
VTQNPILTSLLQITGSVGSSPTPQPPQPHQTPPPTTSPASNTKNHPMLMNLLKDNPSQDF
AALYGSSPLERQNSSGSPRTDSQGQSCPGTKGKKKRPRGSDKGVMGAGGGMNMKQSSQQQ
VGSMTQQHHHTHHSEDDFHRELFSMDVDASQNPIFDVSLPGDGLDTPHSITPAPSQCGTP
PSGPGMPYHSQCHVQPQTQVQSQPQGSIPRMVRLSSSDSIGPDINDILSDIPDQANKGSN
SSHGQHLMAGEEGGSLGTPLRDSSSSGQGSAVFEADLFNANSNENPFTDAADLIAEAATA
ATPNSDSSSTNFFPDTDFNPELLPGQGSFSQTYFEDSSPSPDPDLELVKSFSGGSQQNTP
TGTPQNPASHGQNTPEASLKDPFEMGIFSGNGSGAKPTLGPASDMADSHLPHTGGGQSPL
MLGIVVASNDFKSSDTKVKPQQMRAKEDNGGGNSGIGMGNVCSSEIKQVKRSRTPSSEGK
SKDKPPKRKKLDPDGKSPSHSSGGRPYTPPCGGATSGGLVSAGGSKSPGSSGRSQTPPGG
ATPPIPKITIQIPRTLTGGKTSSHGGYTTSSSASGGTGNTSGTSSSKSHHSHSSLGKIKS
SKLEGSVGQGNIPKSSMAGIGSGMSSQSKGSSMGMGVGKPSSSPITKHGLSGSGSSGSSG
TGSGNKIKPQGGKPPGSLMNPNIKPNISPSHSRSGSSEKLSSPMKLQQGQVPGTPPSSKA
KSPIGSGSGGSGGSKSSSGGMGTQKQLGSSSSTSTSSSTSSASSSSSSGSIPFSSNGQSQ
YGSSGCSGGGGGGSGNNPNSKGKSPSRNKKPSLTAVIDKLKSVGSGGISGEEGEGCGGSS
GGVVPQNIGPTTSKHGMSSLGGEFLSKRDKMDKDGKSKVSGSGGNSGDKKTDSKSSAVTG
TGVAKIIISKPEGGSPSIKSKVTLQKPGESSGDGTMRPQHSGHKASPLFSGSTPKHDRSS
PSHSRSPGYTPINPDSESESGSSSIAEKSHQNSPSSEDDQTMRPHQPIQDYMNSMSISQS
EKHKKHKKEKKKQKERDRERDREKEKKKSTMSCGPSSHPVKTDGWSRSPIASETSMSMLS
SERSSRPSPVYMHTEDDDLMDSALTGNLEPFK
NT seq
5319 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtccggagcagcagcccaggcgcagacacatcccacagcagcactgccgcg
gtctccgaacggctccgagcggaagatggatctgagtcagagaaacacagtcgtatgaca
ggcttgctggaaaggctccacagcaaacataactcttcccgatcctggcaggagacctgc
aaagtggtgcggcaggccatggaaaagcgtggggtcaataatacagctggacaccaactg
ctgctcaactctttagagacactgcaaagggcgctaaaagtatcttcgttgccatcaatg
actgatcgcctggagtcaattgctcggcaaaacatgttgggatctcacctgagcccctca
cgcactgagtgttacatcacttcagatatgttctatgttgaggtgcatttggataaagtt
ggaaagcttgtggatgtaaaagtggcccaccatggtgaaaaccctgtgagttgtcctgag
ctgatacaacatttaaggaacaaaaattttgatgagttttcaaaacacctgaagggcctg
gtgaatctttacaagctccctggagacaacaaattgaagacaaagatgtacctagctctt
cagtctctggagttagacctcaccaagatgatgcatatgttcaggatagccactaatgcc
aactctgtagagacaatacttcacggcagtgtgggactattgatggcgaggagcggtggt
catctagtatctctacagtgttatgtttctccaaatgacatctttgaggaaggaacagga
gcccaactgaactatactgatgtcaatattccccgtactttaggtgtaagtgtgtcagtg
actgttgagggcaccacgtcggtttacaagctacccatcgctcctctaatcacaggatct
catccagtggataacaaaggaactccatccttttcttctgtaacaaactcgaactgtgta
gatttaccagcatgtttcttcctgaagatgaatcgcttgatgccattttctttatcatat
attcaaaaaatgggcagtactacaggtatccctgtttttgagacggcacctaccttgttc
ccattatatgatctcatcattaagagccaactgcatgaggagggagaggccagtcctcct
tctttggccaaatcaattaatttttatgcatctttaccaggacagcagcattgttatttc
ctaaatggtgatgctccagtgcaggatgggagatctcttcaaggaacttatgtttccaag
attcctttcagacatcctgctcaggtgcctgctcttcttgacattataagacatcaggct
gcttacaacacactgattggtagctgcgtcaaaaaaacgtacattaaggaagatactcct
ggactgctacagtttgaagtgtgcccactaactgactcgagcttcagtgtatcttttcaa
caccctgtaaatgaatcacttgtctgtgtggtgatggaggtgattgactcaagacaggta
gcctgtaagctctacaagggtttatctgatgctctgatctgcactgatgacttcattacc
aaagtagtccagagatgcatgtccattcctgtgactatgcgtgccattcgacgtaaagca
gagactattcaagcagatactccagcattgtcccttatagctgaaactgtggaaattatg
gtgaagaaaaacttgcccccaactggcagcccaggctacatgggaatgggtacagggcca
gatgggagcaatccagttggtcttcctggtttaaataatggaaccaactctgcaggaggc
aacagtgttgtaggtgtaggaggaagtggaactttccaaggcccaattacctcacttttt
aacatgggtcgtactggtcaggggggctcatgtgtggacaccataggacaggttggaggc
caacagcaaacaatgcaacatcaacagactcagagccatggttcagatgacttcagtaaa
gttactcagaatccaatcttaactagccttctgcaaataactggcagtgttgggtccagt
cctactccccagccacctcagccccatcagacccccccaccaaccacctctccagcaagc
aataccaaaaaccaccccatgctaatgaacctactgaaggataatccctcacaagatttt
gctgcactgtatggcagtagccctttagaaaggcagaactcatctggctccccgaggaca
gatagtcaagggcagtcttgccctggcaccaagggcaagaaaaagcgtccaagaggctct
gataaaggagtaatgggagcaggtggtggaatgaacatgaaacaatcatctcagcagcaa
gtgggaagtatgacccaacagcatcatcatacacaccattctgaagatgatttccaccga
gagcttttctccatggatgttgacgcctcccagaaccctatttttgatgttagtcttcca
ggtgatggacttgacacccctcacagtatcactccagctccaagtcagtgtggaacacca
ccttcaggtcctggaatgccataccactctcagtgtcatgtccaaccccagacacaagtc
cagtctcagccacaaggatccataccccgtatggtccgcctctccagctctgacagtatt
gggcctgatatcaatgatattttgtctgatattcctgatcaggccaacaaaggaagcaac
agcagtcatggccagcacctcatggctggtgaggaagggggttcattgggaactccactc
cgggattcttccagctcaggtcaaggtagtgctgtttttgaggcagacttgttcaatgca
aacagcaatgaaaatccttttactgatgcagcagatctgattgcagaagctgctactgca
gcaacacccaatagtgattcttcctcaactaattttttcccagacacagactttaaccca
gagcttttgccagggcagggaagtttttcacagacttactttgaagatagctcccccagc
cctgacccagatcttgaactggttaaaagttttagtgggggaagtcagcagaacactcct
acaggcacacctcagaatcctgcctcacatggccaaaatactccagaggcttcattgaaa
gacccttttgaaatgggtatttttagtgggaatggtagtggagcaaagccaacactaggc
ccagcatcagatatggcggactcgcaccttccacatactggtggaggccaaagtccactc
atgttgggcattgtggtagccagtaatgattttaaaagcagtgacacaaaagttaaacca
cagcagatgagggcaaaggaggataatgggggaggaaattctggaataggaatggggaat
gtatgttcttctgaaattaagcaggtaaagcgcagccgtactccttcaagtgagggcaaa
tcaaaagataaaccaccaaaacgtaagaagctagatccagatggcaagtcaccttcacat
agctcagggggtcggccatacactcctccttgtgggggtgccacttctggaggattagta
agcgcaggtggatccaagtcccctggaagctcaggcaggtctcagacaccaccgggaggt
gctactccaccaatccccaaaattactatacaaatacccaggactttaactggaggaaaa
acatcgtctcatggaggctacacaacaagtagctcagcaagtggaggtactggtaataca
agtggtacaagcagtagcaaaagtcaccattctcactcttctttagggaagataaaaagt
agtaaacttgaaggctcagttgggcaaggcaatatccccaaatcaagcatggcaggtatt
ggaagtggtatgtcttctcaatctaaaggatcctccatggggatgggtgtaggcaagcca
tcctcttctcccataacaaagcacggtttgtcaggctcaggcagtagtggcagcagtgga
acaggaagtggaaataaaattaagccccaaggtggtaaaccgcccggctcactcatgaac
cccaacatcaagcccaacatatcaccctcacactctcgctctggaagttctgaaaaactg
tcctcgccaatgaaacttcaacaaggccaggtacctggaactccaccctcttctaaggct
aaatcccctattggctcaggcagtggaggttcaggagggtccaagtcttcaagtggtgga
atgggaacccaaaaacagttaggcagtagctcatccacaagcacttcatcatctacttcc
tctgcaagctcctcttcatcatctggctctatacccttttcttcaaatggtcagtcacaa
tatgggagcagtggttgcagtggtggagggggtggtggaagtggaaacaaccctaattca
aaaggcaaatccccaagccgaaacaaaaagccatctcttactgcagtcatagacaaactg
aagagtgtgggtagtgggggaattagtggagaggagggcgaaggttgtggtggcagttca
ggtggggtagtgccgcaaaatattggtcctacaacctccaagcacggtatgtcctccctg
ggaggtgagtttctgagcaagagagataagatggacaaagatggcaagtccaaggtgtct
ggatcagggggaaattctggtgacaagaagactgattctaaaagtagtgctgtgacaggc
actggtgtggcaaaaattatcatcagcaagccagaagggggttctccaagcataaaatct
aaagtaactcttcagaaacctggagaaagttctggagatggtaccatgcgtccccagcac
tcgggtcacaaagcatctcctcttttcagtggctctacaccaaaacatgaccgtagctct
ccaagtcatagccgttcccctgggtacacgcctataaatccagacagtgagagtgagtct
ggtagcagttcaattgctgaaaaatctcatcaaaacagtcctagctctgaagatgaccaa
actatgagaccacaccaacccattcaagactacatgaattccatgtccattagccagagt
gaaaaacacaagaaacataaaaaagagaagaaaaagcaaaaagagcgagacagagagcga
gacagagaaaaagaaaagaaaaaatcaacaatgtcttgtggaccgtcctctcacccagta
aagacagatggttggtccagatcccctatagcttcggaaacttcaatgtcaatgcttagc
tctgaacgctcctcacgaccaagtcctgtatatatgcatacagaggatgatgacctcatg
gactctgccttgacgggcaatctagaaccttttaaataa
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integrated database retrieval system
