Puntigrus tetrazona (Sumatra barb): 122355442
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Entry
122355442 CDS
T08985
Symbol
nrxn1a
Name
(RefSeq) neurexin 1a isoform X1
KO
K07377
neurexin
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122355442 (nrxn1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122355442 (nrxn1a)
Membrane trafficking [BR:
ptet04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
122355442 (nrxn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
122355442
NCBI-ProteinID:
XP_043109648
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All DBs
Position
12:10707898..10864445
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AA seq
1493 aa
AA seq
DB search
MSFSMRNGAHLIWIGLLVCCLVDMGASMEFTGAEGQWARFPMWNACCESEMSFNMKTKSA
HGLLVYFDDEGFCDFLELLIHNGRLSLRFSIFCAEPATVLSDTAVNDSRWHAVTLRRNFK
NTTLVVDEEIKWVEVKSKRRDMTVFSHLFLGGIPPELRSVALRLTSSAIKDQVPYKGWIT
NLRVNNSEPALIGSDGINSDICEADHICLNGGVCSIVNDEPICDCSETGFQGKDCSEEEA
YVGGLAHLMMGDQGKRKEREEYVATFKGSEYFCYDLSPNPIQSSSDEITLSFKTLQRNGL
MLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHS
GIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKE
VVYKNNDVRLELSRLAKLGDPKMKVSGVVAFKCENVATLDPVTFETPESFITLDKWSAKK
AGSISFDFRTTEPNGLLLFSHGKPKPQQQKDPKSPKTLKVDFFAIEMLDGHLYLLLDMGS
GTTKTRAVNKKVNDGEWYHVDFQRDGRSGTISVNSIRTPYNAPGESEILDLDDILYLGGL
PEDRAGLIFPTEVWTALLNYGYVGCVRDLFMDGQSKDIRRIAEAQRAVGVKPSCSKEPPK
QCLSNPCLNSGTCREGWNRYVCDCSGTGYLGRSCERDATILSYDGSKFMKIQLPVVMHTE
AEDVSLRFRSQRAYGVLMATTSRNSADTLRLELDGGRVRLTVNLDCIRINCTTSKGPETI
FAGQNLNDNEWHTVRVVRRGKSLKLTVDDLQPSEGQITGDHTQLEFHNVETGIVTEKRYM
PAVPSNFIGHLQGLSFNGMSYIDLCKNGDIDYCELNAMIGYRSIVADPVTFKSRSSYVTL
PTLQAYYSMHLFFQFKTTSPDGLILYNRGDGNDFIVVELVKGYLHYVSDLGNGAHLIKGN
SNTPLNDNHWHNVMISRDTNNLHTVKIDTKITTQTTMGAKNLDLKGDLYVGGVAKEMYKD
LPKLVHSKEGFQGCLASVDLNGRLPDLLSDALSNAGQVERGCEVALLKADLQGPSTTCQE
DSCSNQGVCLQQWEGFSCDCSMTSFGGPLCNDPGTTYIFGRDGGLIVYTWPPNDRPSTRA
DRLAVGFSTQQKDAVLVRVDSSSGLGDYLQLQIERGNIKVVFNVGTDDINIEETSKFVND
GKYHIVRFTRSGGNATLQVDDLPVIERYPTGNIDNERLAIARQRIPYRLGRVVDEWLLDK
GRQLTIFNSQTTIKIGGWEKGSRPFQGQLSGLYYNGLKVLNMAAEGDPNVRVEGSARLVG
DMPSSSITPQSSASATGNRSETSPSITDITTTTASNRQGKQTTTPQDDLLVASAECPSDD
EDIDPCDPSSGGLANPPPPEAKGYPSPEVIRESSSTTGMVVGIVAAAALCILILLYAMYK
YRNRDEGSYHVDESRNYISNSATQPNGAAVKEKPIGVPKNKKDKKNKDKEYYV
NT seq
4482 nt
NT seq
+upstream
nt +downstream
nt
atgagcttctcaatgcggaacggcgcacatctaatttggataggcttgctggtttgttgc
cttgtcgacatgggggccagcatggaattcactggcgcagaaggccagtgggcaaggttt
cctatgtggaacgcctgctgcgaaagcgaaatgagtttcaacatgaagaccaaaagcgct
catggacttttagtgtactttgacgacgagggattctgtgacttcttggaactgctcatc
cacaatggcagactcagtttgcggttctccatcttctgcgccgagccagcgaccgtgctc
tccgataccgccgtcaacgacagccgctggcacgcagttaccttgcgcaggaatttcaaa
aacactacgttagttgtggacgaagaaatcaagtgggtggaggttaagtcgaaaaggagg
gacatgacggtcttcagccatttattcttaggagggatacctcctgaactgcgatctgta
gcattacgcctcacgtcttcagccatcaaagatcaggtcccctacaaaggatggataacc
aatctgagagtgaacaattccgagccagcgcttatcggtagcgatggaatcaacagcgac
atttgcgaagccgaccacatttgcctaaacggaggagtctgcagcatcgtcaacgacgag
cctatttgcgactgctccgaaacgggattccagggaaaagactgcagtgaagaagaggcc
tatgtaggaggtcttgcgcacctgatgatgggcgaccaaggcaaaagaaaagagagagaa
gagtacgtggccaccttcaagggttcagagtatttctgttacgacctgtccccgaacccc
atccagagcagtagcgatgagattacgctctccttcaagaccctgcagcgcaatggactg
atgctccacaccggaaaatctgcagactacgtcaacctggcgctgaagaacggtgccgtc
tcgctggtcatcaacctgggctctggggccttcgaggccctggtggagcccgtcaatggg
aaatttaatgacaatgcctggcatgatgtgaaggttaccaggaaccttcgtcagcactca
ggcattggacacgctatggttacaatatccgtggatggaattctgaccaccactggatat
acacaagaggactacaccatgctaggctcggatgactttttctatgtcgggggtagtccc
agcactgccgatctgcctggatcccccgttagcaacaactttatgggctgcctgaaagag
gttgtgtacaagaacaacgatgtaagactcgagctgtctcgactggccaagctaggcgac
cccaaaatgaaggtgagcggcgtggtggccttcaaatgtgaaaacgtggctaccctagat
cccgtcaccttcgagacgccagagtcattcattacccttgacaagtggtctgccaaaaaa
gccggttccatctccttcgacttccgcaccactgagcccaacggccttctcctattcagc
cacggaaaacccaaaccgcaacagcagaaagaccccaagagccccaaaactttgaaggtg
gatttcttcgccattgagatgctggacggccatctgtaccttctgctcgacatgggctcg
ggcaccaccaaaacccgtgccgtcaacaaaaaagtcaacgatggggaatggtaccacgtg
gacttccagagagacggaagatcaggcaccatttccgtcaactcgatccgtactccctac
aacgctcccggtgagagtgagatcctggacttggacgacatactctatctgggcggcctg
ccagaggaccgtgctggtctgatcttccctacggaggtctggactgcgctcctaaactat
ggctatgtgggctgcgtgcgagatctgttcatggacggccagagcaaggacatccggcgg
atagcggaggcccagagagcggtcggggtgaagccgtcctgctctaaggaacctcccaaa
cagtgcctaagcaacccctgcctgaacagcggcacctgcagagagggctggaaccgatat
gtgtgtgactgctcagggacgggctatctgggacgctcctgtgagagagatgccaccatc
ctcagttatgacggcagtaagttcatgaagatccagttgccagtagtgatgcacacagaa
gcagaagatgtgtcgctgcgcttccgttcccagcgtgcctatggtgttctcatggcaacc
acgtcccggaactcagcagacactctgagactggagctggacggagggcgtgtccgactc
actgtcaatctagactgtatcaggataaactgtactaccagtaaaggtccagaaaccata
tttgcgggccagaacttgaatgacaacgaatggcacacagttcgtgtcgtcagaagaggc
aaaagcctgaagctaacggtggacgacctgcagccctctgaaggtcaaatcacgggagac
cacacgcagctggagttccacaatgtggaaacgggcatcgtaaccgagaagcgctatatg
cccgccgtgccctccaacttcattggacacctgcagggtttgtccttcaatggcatgtcc
tacattgacctgtgcaagaacggcgacatcgactactgcgaattgaacgccatgatcggc
tacaggagcatcgtggccgacccggtgaccttcaagtctcgctctagctatgtgaccttg
cccacgcttcaggcctactactccatgcacctgttcttccagtttaagaccacttcacca
gatgggctcatcttgtacaaccgaggagatggaaatgactttatagttgtagagctggtt
aaaggatatctccattatgtgtcagacctggggaatggagctcatcttattaaaggaaat
tccaacacaccactgaatgacaatcactggcacaatgtgatgatctcacgagatacaaac
aacctccatacggtcaaaatagacaccaaaatcaccacacagacgaccatgggagccaaa
aacctggatctgaaaggtgatttgtatgtgggaggtgtggccaaagagatgtataaggac
ttgccaaagctggtgcattcgaaagagggcttccagggctgcttggcatctgtcgacctg
aacggccgtttgccagacctgctgtcagacgcactgtccaatgccggccaggtggagaga
ggatgcgaagttgcattgctgaaagctgacttgcaaggccccagcactacctgtcaagag
gattcctgctccaatcagggcgtgtgtctgcagcagtgggaggggttcagttgcgactgc
agcatgacatcatttggaggaccgctctgcaatgacccgggaaccacatacatattcgga
cgtgatggagggctcattgtgtacacatggccgcccaacgacagaccgagcacacgagct
gaccgactggctgtcggctttagcacccagcagaaggatgcggtgctggttagggtggac
agctcttctggcctgggagactacctgcagcttcagattgaaagaggcaatatcaaagtg
gtgttcaatgtgggcaccgatgacataaacattgaagaaacctcaaagtttgtaaatgat
ggaaagtaccacatagttcgctttacaagaagtggtggtaacgccaccttgcaggtggat
gatctgccagtcattgagcgctatccaacaggcaacattgataacgaacgcctggcgatt
gctagacagcgaatcccatatcggcttggtcgagtagttgacgaatggctactcgacaaa
ggtcggcagctcaccatcttcaacagtcagaccaccataaagattggaggctgggagaag
ggcagtcggcccttccagggccagctctcagggctttactacaatggcctaaaagtcctc
aacatggccgccgagggcgaccccaacgtacgtgtggagggtagtgcccgactggtggga
gatatgccctcctcttctattacgccccagtccagcgcctccgccacaggcaaccgctca
gaaacgtcgccatccatcaccgacatcaccactacgaccgcatccaaccgccagggcaag
cagacgacaactccacaggatgatcttctagtagcatcggcagaatgtcccagcgatgat
gaggacattgacccttgcgatccaagttcaggtgggttagctaaccctccaccgcccgag
gccaagggttaccccagccccgaggtgattcgggagtccagcagcaccacaggaatggtc
gtaggcatcgtcgcggcagccgccctctgcatcctaatcctgctctacgccatgtacaaa
taccgaaatcgcgacgagggctcgtaccacgtggacgagagccgtaactacattagtaat
tccgccacgcagcccaacggagctgccgtcaaagaaaagcccatcggcgtgcccaaaaat
aaaaaagataaaaagaacaaggacaaggaatactacgtctga
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