Puntigrus tetrazona (Sumatra barb): 122355505
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Entry
122355505 CDS
T08985
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122355505 (vps35l)
Membrane trafficking [BR:
ptet04131
]
Protein recycling
Others
Retriever complex
122355505 (vps35l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
122355505
NCBI-ProteinID:
XP_043109850
LinkDB
All DBs
Position
12:complement(3753578..3764451)
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AA seq
963 aa
AA seq
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MASVQWHSRARKYESELQIYRLELSAVEFSDYHPLKAITVTDSKSRRGARKGSTSSSSSS
SSSVALDPLSSMLDGTDPLSLFAAASETPTLPHSVSAGELGRKRKEKEEEVGSDFEPWSS
KRGEILSRFTTTEKLSINLFMGSDKSKASSPSSAVSEKVRTRLEELDDLEEGSQRELLNL
SQQDYVNRIEELNQSLKEAWGSDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLITDILD
TFGGLVYDRIWSMCADPHPLSESFSADDVNDTAKETCLNWFFKIASIRELVPRLYVEAAL
LKCNRFLTKSGIQETLQRLTAMIRGIGDPLVAVYARAYLCRVGMEVAPHLKDSLNKNFFD
LLASFRQIHGESVQNQLVLQRVEIPIYLTLYSPAIHWILQCVAYRAPEVLLTEMMDRCKK
LGNNALLLNSVMWAFRAEFVATRATDFIGMIKDCDEAGFPKHLLFASLGRSLSCADPPEN
ERLSILNEAWKVITKVRGPRDYINCAEIWVEFTCRHFTKREVNTVLADIIKHMTPDRAFE
DAYSQLQSVIRKILTYFHDFSVLFSMEKFLPFLDMFQKDSVRVEVCKSIMEVFIKHQQEP
TRDPVILNALLHICKTMHDSVNALTLDDEKRALSLLINGFIRMVSFGRDFEQQLSFCVEA
RATFCNLEPVIIHLIHTVNQLAMETRRVMKGNHSRKTAAFVRACAAYSFITVPSLTSIFS
RLNLYLLSGQVALANQCLSQADAFLKAAVSLLPEVPRTISIEGKQRSSEPFLLDFINNFL
STLLVVPDHPEQGVLYLVRGLLNMVQDYTWEDNSDAKIRVYISALPLLAAMSQESYLYTI
PKVDSNETLYGGDPKFIAEINKLCETLIGQVLDHLKGLGRDEGVRRQGGLAFSMFGCLLA
HGDLRNNKLNQLAVNLWNLSHKHGFCDTRTSVRTLEYIKHQAQQADMSHLTDMTTRLSLQ
SRA
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagttcagtggcactctcgggcccgtaaatatgagagtgagttgcagatatat
cgtttggagctttcagcagtggagttcagtgactatcatccacttaaagcaattacggta
acagattctaaatctcggcgtggtgctcggaaaggcagcacttcctcctcctcttcctcc
tctagttctgtggctctggatccactcagctcaatgctggatggaaccgatccactgtct
ctcttcgctgcggcgtctgagacaccaactcttccacacagcgtctctgcaggggagctg
ggacgcaaacgtaaggagaaagaggaggaagtgggctcagactttgagccgtggtcatct
aaacgtggagagatcctgtctaggtttaccaccacagagaaactgtctataaatctcttc
atgggctcagacaagagtaaagcatccagtcccagctcagcggtgtcagagaaggtgcgc
acgcgtctggaggaactggatgacctggaggagggctctcagagggagctgttaaacctg
tcccagcaggactatgtcaaccgcattgaagagctcaaccagtctctgaaggaagcctgg
ggttcagaccagaaggtcaaagccctgaaaatcgtcatccagtgctccaagctgctctct
gatacatcagtgattcagttctaccccagcaaatttgttcttatcacagatatactggac
accttcggtggtctggtgtatgacaggatctggtccatgtgtgctgacccacatcctctg
tcggaatcgttctccgctgatgatgtgaacgacacagccaaagagacgtgcctcaactgg
ttctttaaaatcgcctccatcagagagcttgtccctcgattatatgttgaagctgctctt
ctaaaatgcaatcgcttcttgacaaagtctgggattcaggagacgctgcagagactgaca
gcgatgatcagaggaataggagacccgctggtggctgtatacgcacgggcgtatttatgc
agggtggggatggaggtggctccgcatctgaaggacagtctcaataagaatttcttcgac
cttctggcctcattccgtcagattcatggtgaaagtgtgcagaatcagctggtgctgcag
cgggtggagattcccatctatctgaccctctattctcctgcaatacactggatcttgcag
tgcgtagcatacagagcgccagaggtcctgctaacagaaatgatggacagatgcaagaag
ttgggcaacaacgctctcctgctgaactctgtcatgtgggcattccgggcagaatttgtc
gcaacgagagcaacggactttattggcatgatcaaagactgtgatgaagctggatttccc
aagcacctgttattcgcatctctgggtcgcagtctgtcctgtgccgaccctccagagaat
gagagactctccatactcaacgaagcttggaaggtcatcactaaagtgcgcggcccaagg
gattacatcaactgtgctgagatctgggtggagtttacatgccgtcacttcaccaaacgg
gaggtgaacacagtccttgctgacatcatcaaacacatgactccagacagagctttcgag
gatgcgtattcacagctgcagtccgtgataaggaagatcctcacctacttccatgacttc
tctgtgctcttctcaatggagaagttcttgccctttctggacatgttccagaaagacagc
gtgagggtggaggtgtgtaaatccatcatggaggtcttcatcaaacaccagcaggaacca
acaagagatccagtcattcttaatgcgctgctgcacatctgtaagaccatgcatgactct
gtcaatgctctaaccctagatgatgagaaaagagctctgtctctgctgatcaatggattt
attcgcatggtgtcatttgggagggactttgagcagcaattgagcttttgcgtggaagcc
agagcaactttctgtaatctggagcctgtcatcattcacctgattcatacggtgaatcag
ttagccatggagaccagacgtgtaatgaaaggcaatcactcgcggaaaacggctgccttt
gtcagggcatgtgctgcctacagtttcatcaccgttccttccctcaccagtatcttcagc
cgtctcaacctctatctgctctctggacaggtagcactggccaaccagtgtctgtctcaa
gcggacgcgtttctgaaagcagctgtcagtcttttgccagaagtcccgcgaaccatcagc
attgagggaaaacagcgatcatccgaaccctttctcctcgacttcattaacaacttcctc
tccacattgcttgtagtaccggatcatccggagcagggtgtgctgtatctagtgcgaggg
ctgttgaatatggtgcaggactacacctgggaggacaacagtgatgctaagatccgcgtc
tacatcagcgctttgccgttactagcagcaatgagccaagagagctatctttacaccatt
cctaaagtggattccaatgaaaccctgtatggaggagatcccaagttcatcgcagagatc
aacaagttgtgcgagactctgatcggtcaggttctggatcatttaaaggggcttggacga
gatgagggagtgcgcagacagggcggtctggctttctctatgtttggctgtctgttggct
catggtgatctacgcaacaacaaactcaatcagctggccgtcaacctgtggaacctgagt
cacaaacacggcttttgtgacacgcgcacgtcggttcggactctggagtacatcaagcat
caggcgcagcaggcagacatgagccatctcacggatatgacgacgcgtctgtcattgcag
tccagagcctga
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