Puntigrus tetrazona (Sumatra barb): 122355511
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Entry
122355511 CDS
T08985
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122355511 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122355511 (gspt1)
03012 Translation factors [BR:
ptet03012
]
122355511 (gspt1)
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
122355511 (gspt1)
Translation factors [BR:
ptet03012
]
Eukaryotic type
Release factors
122355511 (gspt1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
122355511
NCBI-ProteinID:
XP_043109858
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Position
12:complement(8520500..8528474)
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AA seq
564 aa
AA seq
DB search
MDSRDTAPDSWEQEDDVEATADTELQSAFTGLNVNAPEFVPSFLSRGPPENATSDGTDAV
ASMEISEPVAAVENGETDAAAVETWEQKGEPDEEEPGGGSSADTGFGGDEAQDEMMEEDE
EMPTPKLPPPPPDAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVEKRTLEKYEREAKE
KNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQ
ADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSLDRYE
ECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKESSELCPWYTGLPFIPHLDSLPNFN
RSSDGPIRLPIVDKYKDMGTVVLGKLESGSIAKAQQLIMMPNRHTVEVLSLLSDDVETDY
AGPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTFDAQIVIIEHKSIICPGYNAVLH
IHTCIEEVQITALICLVDKKTGEKSKTRPRFVKQDQVCIARLRAAGTICLETFKDFPQMG
RFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggactcgagagacacagcccctgattcgtgggaacaggaggacgatgttgaggccacg
gctgataccgagcttcagtccgccttcaccgggctcaacgtgaacgctccggaattcgta
ccgtcttttctttcccgaggtccaccggaaaacgccacgtctgatggcaccgatgcagtg
gccagtatggagatctcagaaccagtggctgcagtggagaatggagagacagatgccgcc
gcagtggagacatgggagcagaaaggtgagccggatgaggaggaaccgggaggtggatcc
tcagcggacacaggatttggcggggatgaggcgcaggatgaaatgatggaggaggatgag
gaaatgccaacaccaaagctgcctcctcctccaccggatgcccctaagaaagaacacgtg
aatgttgtgttcattggacatgtggatgcaggcaagtctacaattggtggacagataatg
tatctaactggtatggtggaaaaacgaacgctggagaaatatgaacgggaggcaaaagag
aagaacagagagacttggtatctttcctgggctctagacacaaaccaagaggaaagagac
aaggggaaaactgtagaagttggaagagcctactttgaaactgagaaaaagcactttact
attcttgacgccccaggccataaaagctttgtacccaacatgattggaggggcatcccaa
gctgatttggcagtgctggtcatctctgccagaaagggtgagtttgagaccggttttgaa
aagggaggtcagacaagagagcatgccatgctggctaaaacagctggagtgaaacatctg
atagtcctcatcaacaaaatggacgaccccactgtgaactggagtttggatagatacgag
gaatgtaaagagaagttagtgccatttctgaagaaggtgggctttaatccaaagaaagac
attcacttcatgccctgctctggcctgactggagctaacctgaaagaatcttctgagctt
tgcccttggtacacgggattaccattcattccacatctggacagcctgccaaacttcaac
agatcaagtgatggtcccatccgattgcctattgtggataaatacaaggacatgggcacc
gtggtgcttggaaaactggagtctggaagcatagcgaaagcacaacaacttattatgatg
ccaaataggcacacggtggaagtgttgagccttctctctgatgatgtggagacggattac
gctggacctggtgaaaacctgaagctccggctcaaaggcatcgaggaggaagagattctc
ccaggctttatcctatgcaatgctgagaacctctgccactcaggacgcacttttgatgcc
cagatcgtcattatcgaacacaaatccataatatgcccaggttacaatgctgtattacac
atccatacctgcatagaagaagtgcagataacagcattaatctgtctggtggacaagaag
actggagaaaaaagcaagactcgtccacgcttcgtcaaacaagaccaagtatgcatcgcc
cgtcttagggccgcaggaactatctgcttagagacttttaaagacttccctcaaatggga
cgtttcaccttgagagacgagggcaagacaatcgcaattggcaaggtgcttaagttggta
cctgagaaggactaa
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