Puntigrus tetrazona (Sumatra barb): 122355525
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Entry
122355525 CDS
T08985
Symbol
jmjd1cb
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptet03036
]
122355525 (jmjd1cb)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
122355525 (jmjd1cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
zf-C5HC2
FYVE
C1_2
Motif
Other DBs
NCBI-GeneID:
122355525
NCBI-ProteinID:
XP_043109886
LinkDB
All DBs
Position
12:complement(2176396..2285052)
Genome browser
AA seq
2550 aa
AA seq
DB search
MVVGKRFLCVSGEEPLEPAHIASWSWRTGVIRAVTHRDHDNPELTVYVEFDDLEWDKREW
VKVYEDFQVFLLEHQLVWAKRKEGAQLQGTKAKQIQWPALTFKPLVGKTVLGSITAIEFF
SDRHLDFLTDEGACQPYQDEVDSLSPVFRDYPHLHEEVKAWVKDQKVQEIFMQGPYSLNG
YRVRVYRQDSATQWFTGIITHHDLFSRTMVVMNDQVLEPQNVDPSMVQMTFLDDVVHSLL
KGENIGITSRRRSRSSQNSNTAHQTTGGRPSGSTGITQGHYTRAQANSPRPVMNSSGSTP
KQASQAQQQQQQSQHAQQQLSQQHQQQQASPGQQRGSRSSRRKGSDSSVPDDEKIKDEKS
DSGGKDSSKNKSKQTNKRRKADEEDKKGGLKRLKTETSDLSESSDSENSNKRSIDSSSEP
SSENELKCKSTSKVPEEEEEKSQGSKPVDELGVINRLSPWDEMQDKSSKPVVVEVAEGER
SGERRSPLTPPASCTQNQASGPTEVQSCIVEMKSTVKTLPKDHYGTGTPRTHTPKCVIDI
TEDANTQSSSRENSEAVSALLASQKCDAYVPESRHLVLNASHSESRRTDGEQQQNARSIG
GKIEFTHSEVIRPVTSVSESAALGERGKLQQQYTSMVIKNASLTEDIKKTHKLSPSPDLP
KPKSNSSPDILKPKCNPSPDIKSKSHNVHESSKPKPNTSPEVSKHKPRHPENPPTTVRLP
LKPEPDIPRSSFKPVPARGGPSEARKSPLVDKNEPFTVYRDPALVRPESDSNHMTYLHPH
LHALHGSSHATCLTPSSHHPSHLLPSSSMSHSVHHPHLLPTVLPTIPPTSLLGSHPRLDS
PALGHLALAHHHSHQQQQFLQQQPPPPLLAQTHGGASYNQLGLYPIIWQYPNGTHSYPPG
YKWVHPENAVNSDSSLRRNTSSPWLHQSTPVTSADSMGILSHVPGRPASADPHRPIKISS
HSSPPLSKTPGELHKEDQEKNVFVDPLRSMANAHLKQEPDRSRTPTNKELHRFYMESPHS
KQQLPPRMPQGGPDRNSKYKEENRRILRESIEMAPFTAKICAGESERESYPRISSQPKSH
EKEVEHSVADLYKYKHSVSQSLPQTNYFTTLSNSVVNEPPRLFQSKDLNPYFDKAPAASS
PLSLGSYNSSHTKSLSKPPPLIKHQPEGEGLVGKISEQLSQQAPIHSLSTSVLTVSERCS
PAISPSSQPKGMPALRRAPVFHPPTQQALDRKEGAYGRLSPPTLTPIQPVSSAGKVSEQQ
KPPTLLPELRDEKSGAELGSAESCRPGGEAKSHEKVAWHSENSQGKPQAAMASVIVRPST
CIKYDGSPGPKMAPKEQLGSRLFAGRVQADCLKVAESRESGRVILPNTNLEDPSDQYNKN
LIRASQGIMPSSVAVVANSVCNTRTNEAIAAASSTFSTQSHNGVDLSFSISGACGSSRLE
ISASKSRPPTVVESQEGGSRTTSPSALPQAGSAGPTQAYSRNFVHLKKAKAALAAAQSRG
SSSASESESGSVRSSQDSPTITQDNSTPSNPASKASPVPNGQPVQVCQSNYHKLKKAWLT
RHSEEDKNTNKSEKGGNAISELIKPCSVNLIAPASSDVDLGKDNKGQEDKLSQEDRKTRR
TQKRPYESGSESGDDSDSSESKLEQRTKRQPKPTYKKKQNDMQKRKGDNEKDEDEVKPNG
IFRSAKEKTKLKLASTNGIPRSVLKDWRKVKKLKQTGESFLQDDSCSEIGPNLQKCRECR
SIRTKKGEESAHSPVFCRFYHFRRLSYSKNGVIRIDGFSAPDQYDEEALSLWAPEGYEEN
NLDLETSKYILSYIGDKFCQLVMTENTATTWIKKDAKIAWKRAVRGVRESCDACEATLFN
IHWVCQKCGFVVCLDCYKAKERKSSKDKELYAWLKCVKGQPHDHKHLMPTQIIPGTVLTD
LMNAMHMLSEKYSIKSHCSCAWKQNTLYNKLPSTNGVSQVLQNVLNHSNKISLCKPEGGQ
QNSSLKVEANGGSSPASDTSTDSKFTPPESQSPLHFLADLAEQKSREEKKENKESGVGKI
KEEKDQSDALESLHSKASSLEQGSTLRDLLTTTAGKLRLGSTDAGIAFAPVYSTASQIVK
SGRSMPNILDDIIASVVENKIPAGRGTKLNLKHEPLEEPKAERKKAVEEPPKLYADIPHC
WLYERRLLWLKDHRNNNNWKLFRECWRQGQPVLVSGVHKKLNASLWKAESFNQEFADHQG
DLLNCKDGVMSNSGVKEFWDGFEDLTKRPKSRDGETVVYRLKDWPSGEEFMALMPSRYDD
LMKNLPMPEYSDPEGNLNLASHLPSFFVRPDLGPRLCCAYGTAAPSVSLSCVAASQEQDF
GTANLHMEVSDIISVLVYVGVAKGNGVLSKTGVLKRLEEEDLDDNVKKRLKDSSETPGAL
WHIYTSKDGEKIKEFLHKVAKEQGVEIPADHDPIREPGWYLSRKLRQRLLDEYAVQGWTV
VQFLGDSVLIPAGALHQVQNLHSCVQVINDFVSPEHVVHSFHLTQELRSSKEEVNYEDKL
QVKNIFYHCVKDAVGTLKRCCAEEEEETNS
NT seq
7653 nt
NT seq
+upstream
nt +downstream
nt
atggtggtcgggaagcggttcctgtgcgtgagcggagaggagccgctggagcccgcgcac
atcgcgagctggtcatggcgaaccggagtcatccgagccgtcactcaccgcgaccacgac
aatcccgaactgacggtttacgttgagttcgacgacctcgagtgggataagcgggagtgg
gtcaaggtgtacgaagacttccaggtctttctgctggaacatcagctggtttgggccaaa
aggaaggagggtgcccagctgcagggaacaaaagccaagcagatccagtggccagctctg
acgttcaagcctctggtagggaagaccgtgttagggtccatcacagccatcgagttcttc
tctgacagacacctggactttctaacagatgaaggagcctgtcagccctatcaggatgag
gtggacagtttaagtcctgtttttagggactatccacatctccatgaagaagtgaaagcg
tgggtgaaagaccaaaaagttcaggaaatttttatgcaaggtccctattcattgaatggc
taccgtgtacgagtttacagacaggactcagccacccagtggttcacgggcatcatcacc
caccacgatctcttcagccgcactatggttgtcatgaatgaccaggtactagagcctcag
aacgttgacccctccatggtacagatgacctttctggatgatgtggtccattctttacta
aaaggagagaacatcggtatcacgtcacgacgcaggtctcgctctagccagaacagcaac
actgcccaccagaccacaggagggagaccaagcggctctacaggaatcactcagggtcat
tacacgcgtgcccaggccaacagccctagacccgtgatgaattcctctggctccaccccc
aaacaggcctctcaggctcagcagcagcagcaacaatcccagcatgctcagcagcagcta
tctcaacaacaccagcagcagcaggcctcaccgggtcaacagcgtggctcgcgatcttca
cgtcggaagggctctgacagtagtgttccagatgatgaaaagattaaagatgaaaaatcg
gacagtggaggaaaagattcttctaaaaacaaaagcaagcagacaaacaagagaaggaaa
gcagatgaagaggacaagaagggcggtctcaagcggctcaaaacagagacgtctgatctc
tctgagagcagtgactctgagaactctaataagcggagcatagactcctcatcggagccc
agttcagagaatgagctgaaatgcaagagcacttcaaaagttccagaggaggaggaggag
aagtcccagggatccaagcctgtggatgagttaggtgtgatcaacaggctatctccctgg
gatgagatgcaggataaaagcagcaagccggtggttgtggaggtggcagagggtgagagg
tcaggagaaaggagatctccgctgactcctcccgcgtcctgtacccaaaaccaagcctct
ggaccaacggaggtccaaagctgcattgtcgagatgaaaagcactgtgaaaacccttcct
aaggaccattatggcacaggaacacctaggacgcacacgcccaagtgcgtgattgatatc
acagaggatgccaacacgcagtctagttccagagagaactctgaggccgtatcggccctg
ctggcatcacagaagtgtgatgcgtatgtccctgaatccagacatttggtgctaaatgcc
tcccactcagagagcaggaggacggatggcgagcagcagcagaatgctcgcagcataggc
ggtaaaatcgaattcacccactctgaggtcataaggccggtgacatcagtgagtgagtca
gcagccctgggcgagagagggaagctccagcagcagtacacgtctatggttattaaaaat
gcctcgctgaccgaggacatcaagaaaacccataaactcagtccttcccctgacctgccc
aaacctaagtctaactcatcccctgacattctcaagcccaagtgcaatccttcacctgac
atcaagtcaaaatcccacaacgttcatgaatcctccaaacccaaaccaaatacgtctcct
gaggtgtccaaacataaaccgcgccaccctgaaaacccacctacaacagtccgattgcca
ctcaaacctgagccagacataccccgctctagttttaagcctgttccagcacgaggggga
ccctcggaagcaaggaaaagcccacttgttgacaaaaatgagccttttacagtataccga
gaccctgcgttggtgcgtcctgaatcagatagcaaccacatgacttacctgcacccacac
ctgcatgcactgcatggttcttctcacgcgacgtgtctcacgcccagctcgcaccacccg
tcccacctcctcccttcttcctccatgagccactctgtgcaccacccacaccttctgccc
actgtactacccacaattccaccaacctctcttctgggcagccatccacggctggactcc
cctgcactagggcacttggctttggcccaccaccattcccaccagcagcagcagtttctt
cagcagcagccacccccacccctgctggcccagacgcatggaggtgcctcgtataaccag
ctcggtctctaccccatcatctggcaatacccaaacggtacccactcctacccacctgga
tacaagtgggtacatccggaaaatgctgttaattcagactccagtctacggaggaacact
tccagcccctggctgcaccagtccacccctgtaacctcagcagacagcatggggattttg
agccatgtcccgggcagaccagccagtgcagatcctcatcgacccatcaagatcagctca
cactccagcccaccgctctctaaaacccctggagagctccacaaagaggatcaggagaag
aatgtgtttgtggaccctttacgtagcatggccaatgcccacctgaagcaagagccggac
cgtagccggacgcctacgaacaaggagctgcaccgtttctacatggagtccccccacagc
aagcagcaactaccaccacgcatgcctcaggggggtccagaccgtaacagcaaatataag
gaagaaaaccgccgcattcttagagagagcattgaaatggcccccttcactgccaagatc
tgtgctggagagtctgagcgtgaatcctatccccgaatttcatcccagcccaaaagccat
gagaaagaggtagagcactctgtggctgatctatacaagtacaaacactctgtatctcag
tccctccctcaaaccaactacttcaccactctgtcaaatagtgttgtaaacgagccacca
cgacttttccaatccaaagatctcaatccgtactttgacaaagcacccgcagcctctagc
cctttgtctttgggctcatacaactctagtcacactaagtctttgtccaagcctccccct
ctcattaagcaccagccagaaggagagggactagtgggcaagatcagcgagcagctcagt
caacaagcacctatacattcactcagtacctcagtgttgacggtcagtgaacgctgcagc
cccgctatctcaccctccagtcaacccaagggcatgcctgccttgcgtagagcgccggtt
tttcatccgcccacccagcaggcgcttgaccgcaaagagggggcctacggtcgcctttcc
ccacctacgctcacccccatccagcccgtcagctcagcagggaaggtgtcggaacagcag
aaaccgcccaccctgcttccagagctcagggacgagaaaagtggagccgagctgggctcg
gccgaatcctgtcggcctggcggggaagcaaagagccatgagaaagtggcctggcattca
gagaatagccaagggaaaccacaggcagccatggcatctgttattgtccgcccttcaact
tgcataaaatacgatggctcgccaggtcccaagatggcccccaaagagcaactcggtagc
agattgtttgctggccgcgttcaggcagactgcctgaaagtggccgagagtagggaatct
gggagagtcatcttaccaaacacgaatttggaggatcccagtgatcagtacaacaaaaac
ctgattagagcgtcacagggtatcatgcccagctcagtggcagttgttgccaattcggtg
tgcaacactaggactaatgaagccattgctgccgccagcagcacgtttagcacgcaaagc
cacaatggagtagatctgtcattctccatctctggcgcttgtggtagtagcagactggaa
atctctgcttccaaaagccggcctcccactgttgttgagtcacaggagggaggctcgaga
accacctcccctagtgcgctccctcaggccggctctgctggccccacacaggcttactca
aggaactttgttcacctgaaaaaagccaaagcagctctggctgcggctcagtctcgtggc
tccagtagcgcctcagagagtgaaagtggtagcgtcagatcctctcaggactcgcccacc
atcacccaggataactccacgcccagcaatcctgccagcaaagccagcccggtgcccaat
ggacagccagtgcaggtgtgccagtctaactatcacaagctcaagaaagcctggctcacg
cgacactcagaggaggacaaaaatacaaacaaatctgaaaaaggtgggaatgccatttct
gagctaattaaaccatgctccgtcaacctgattgcccctgcatctagtgatgtggatctg
ggcaaggacaacaaaggacaagaggacaagctgtcccaggaggatagaaagacacgccgt
acccaaaagcgcccatacgaatcaggttcggagagcggcgatgactcagactctagtgag
agcaagcttgagcaaaggactaaaaggcaacccaaacccacttacaaaaagaagcagaac
gacatgcagaaaaggaaaggagacaatgagaaggacgaggacgaggtaaagccaaatggt
attttccggagtgctaaggaaaaaaccaaactcaagctggccagtaccaatggcattccc
cggtcagtactgaaggactggaggaaggtaaagaagctaaagcagacaggtgagtccttc
ctacaggacgactcgtgctcggaaatcgggcccaacttgcaaaagtgcagggagtgccgc
tccattcgcaccaagaaaggagaggagtctgctcattcacccgtcttctgtcgcttttac
cacttccgccgcctctcgtacagtaagaatggagttatccggattgatggcttctccgct
cctgatcaatatgatgaagaggcgctcagtctctgggccccagagggttatgaagaaaac
aacctggacttagagacttccaaatacatcctcagctacattggagacaaattctgtcaa
ctggttatgactgagaatacagcaactacgtggataaagaaagatgccaagatcgcctgg
aagagagcagtgcgcggagtgagagagagctgcgacgcatgtgaagccacattgtttaac
attcactgggtctgccaaaaatgtggatttgtggtgtgtttggactgttacaaggccaag
gagaggaagagctccaaagataaagagctgtatgcctggttgaagtgtgtcaagggacag
cctcatgatcacaagcacctgatgccaacacagatcattccaggaactgttctgacggac
ttgatgaacgctatgcacatgctcagcgagaagtacagcattaaatcacactgctcttgt
gcttggaagcagaacaccctttataacaaactgccgtccaccaatggcgtctcccaggtg
ttacaaaacgtgctaaatcacagcaacaagatctctctgtgcaagcctgagggaggtcag
caaaactcctctctgaaagtagaggccaacggagggagcagtcccgccagcgacaccagc
actgacagcaagttcaccccacccgagtcccaatcgcctctgcacttcctggccgatctg
gccgagcagaaatcccgcgaggaaaaaaaggaaaataaggagtcaggtgtaggcaagata
aaggaggagaaggatcagtcagatgctttggagtctctgcacagtaaagcatcttccctg
gagcagggatcaacccttcgagacctcctcaccaccaccgcaggcaagctgcgcctgggc
tccactgatgccggcatcgcattcgctcccgtctactccactgcctcacagattgtcaag
agtggccgcagcatgcccaacatcctggatgacatcatcgcctctgtggtggaaaacaag
atcccggcgggccgtggcaccaagctgaacctgaagcatgagcctctggaagagcccaaa
gctgagagaaagaaagccgtggaagaaccgcccaaactgtatgctgacatcccgcactgt
tggctctacgagcgcaggctgctctggctcaaagaccaccgcaacaacaacaactggaaa
ctcttcagggagtgctggagacaaggacagccggtgctggtctctggggtgcacaagaag
ctcaatgccagcctgtggaaggcagaatcctttaaccaggagtttgctgaccaccaggga
gacctcttgaactgcaaggatggagtaatgtccaactcgggcgtcaaagaattctgggac
ggctttgaagatctcacgaagcggcccaagtctagagatggagaaactgtggtgtatcga
ctgaaagactggccttcaggggaagagtttatggctttgatgccctccaggtatgatgat
ctcatgaaaaacctcccaatgcctgagtattcagaccccgaggggaacctcaacctggca
tcccatctgccctccttctttgtgcggccggacttgggcccacgcctctgctgcgcttac
ggtactgcagctccctctgtctctctctcatgtgtggcggcatctcaggagcaggatttc
ggcaccgctaacctgcatatggaggtgtcggacatcatcagcgtgttggtttacgttgga
gtggccaaagggaatggtgtcctgtccaaaacgggagtgctaaagaggctggaggaggaa
gatctggatgacaacgtgaagaaaagattaaaggattcaagcgagactcccggagccttg
tggcacatctacacgagcaaagacggcgagaagattaaagagttcctgcacaaggtggct
aaagagcagggcgtggagatcccagcggatcacgacccgatccgtgagccaggctggtac
ttgagccgcaagctgcgtcagcggctgctggatgaatatgccgttcagggctggactgtg
gtgcagtttctgggtgattccgtcctgatccctgctggagctctgcatcaggtgcaaaac
ctacacagctgcgtgcaggtcatcaatgacttcgtctctccggagcacgtggtgcattcg
ttccacttaacccaggaactcagatcctccaaagaggaagtcaactacgaagataagcta
caggtcaagaatatcttttaccactgcgtgaaggatgccgtgggaacattaaagaggtgc
tgcgccgaggaagaggaagaaacgaactcatga
DBGET
integrated database retrieval system
