Puntigrus tetrazona (Sumatra barb): 122355529
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Entry
122355529 CDS
T08985
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ptet04054
]
122355529
Pattern recognition receptors [BR:
ptet04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
122355529
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Gene cluster
GFIT
Motif
Pfam:
NACHT
FISNA
NLRC4_HD2
LRR_6
PRY
NOD2_WH
SPRY
LRR_4
Motif
Other DBs
NCBI-GeneID:
122355529
NCBI-ProteinID:
XP_043109938
LinkDB
All DBs
Position
1:29355627..29365266
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AA seq
1150 aa
AA seq
DB search
MSRMRVLLSSESKPQVNSTGKLGSFDGLRTVRNITVRIFRMRKRKGSSPGHSCVSLKNAR
SRMDHPDFSYDTVTFDPSRADGEQHISGGATSVFCLNNMNVTAPLNKHNQPVNDELQRVK
DHHKTSMKNKYERLFEGLTLQENETILNRIYTQIYIIEGESEGVNEEHEVLQMEKTARTY
DLQDTPIYCNDIFKASTVPGCEEKDQIKTVLTKGIAGIGKTVSVQKFILDWAEGKANQDV
DFMFVLPFRELNLIRDHQYSLHRLLLDFHPELQDLNSKIYEECKVVFILDGLDESRIPLM
FSDDQKVCDVTETSSVSVLMSNLIKGELCTSALIWITSRPAAANQIPSKYINRLTEIKGF
TEPQKEEYFRKRISDQHQASRIISHIRRARSLHIMCHIPVFCWISSTVLQKLLEVDLSAE
IPQTLTEMYIHFLLIQISTRNQEYEETHPKKLLQSNREVIVKLAEVAFKQLMKGNVMFYK
EDLIESGIDVTDDSMYSRICTEIFKKESVIHQRKVYSFIHLSLQEFLAAFYVIYCFLMKN
IEPIQFFLHEFTSYTFKVSLYNLLRSAVNKALISKNGQLDLFLRFLLGVSLKSNQRLLQD
LLTHTEIRLESIKGTTQDIKEMMKDIHNSYRLSAGQSINLFLCLLEVKDQTLSREIQEFL
KSDKHSEKKLSPAHCSTISYMLQTSEEPLDKLDLKKYNTSDEGRRRLIPAVINCRKAILS
GCGPSDQHCEIVSSALKSSNCFLRELDLSNNDLQDSGVKLLSDGLKRPNCQLQILRFAVC
NLTAQCCESLSSALQSSNCVLKELDLSNNDLQDSGVKLLSDGLKSPNCQLQILRLAGCNL
TAQSCESLSSALQSSNCVLRELDLSNNDLQDSGVKLLSDGLKSPNCQLQILRLSGCMVTE
EGCGYLSSALSSNPSHLRELDLSYNHPGDSGVQLLKHKLEDPDYTLQILNVDHGGEIRIT
TGLQKYTCDLTLDPNTAHTKLELSDENRKITHEFERQQYPDHPDRFDGVPQVLSVQSLTG
RCYWEAEWSGDNADISVSYKGINRKGVKEDSMFGWNEKSWSLDCSDNRFSVWHNNKSTNI
PSVSSSSNRVGVYLDWSAGSLSFYSVSDTHTLTHLHTFNTTFTEPLYAGFTVYYDSSVSL
CDIKSCKSSF
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcatgcgcgttcttctctcatctgaatcgaaaccgcaagtaaactcgacagga
aaattaggtagttttgacggcctaagaactgtcagaaacatcacagtaaggatcttcagg
atgaggaagaggaagggatcatctcctgggcacagctgtgtgtctctgaaaaatgcaaga
tccaggatggatcatcctgatttcagttatgacacagtgacctttgaccccagcagagca
gatggagaacaacacatctctggaggagccacctctgtcttctgtttgaacaacatgaac
gttacagcgcctctgaataaacataatcaaccagtgaatgatgaactacagagagtcaaa
gaccatcacaaaaccagcatgaagaacaagtatgagagattatttgagggactgacactc
caggagaatgaaaccatcttgaacaggatttacacacagatttacatcatagagggagag
agtgaaggagtgaatgaagaacatgaggttttacagatggagaaaacagccagaacatat
gacttacaagacactccaatctactgcaatgacatctttaaagcttcaactgtaccagga
tgtgaggagaaagaccagatcaagactgttcttactaaaggcatcgctggaatcggaaaa
actgtctctgtgcaaaagttcattctggactgggctgagggaaaagccaatcaggatgta
gatttcatgtttgtgcttccatttcgagagctgaacttgatccgagatcatcagtacagt
cttcacagacttctgctggactttcatcctgaacttcaagatctgaactcaaagatttat
gaggagtgtaaagttgtgttcatcttggatggtctggatgaaagcagaatcccactgatg
ttttcagatgatcagaaagtgtgtgatgtgactgagacttcatcagtgagtgtgttgatg
tcaaacctcataaaaggagagctgtgcacttctgctctcatctggatcacctccagacca
gcagcagccaatcagatcccctccaaatacatcaaccgtctgacagaaattaagggattc
actgaacctcagaaggaggaatatttcaggaaaagaatcagtgaccagcatcaagccagc
agaatcatctcacacatcagaagagcaagaagcctccacatcatgtgccacatccccgtc
ttctgctggatctcatccactgtgcttcagaagctcctggaagtagatctgagtgcagaa
atcccccaaactctaactgaaatgtacatccactttcttctgattcagatcagcacgagg
aaccaggagtatgaagagacacatccaaagaaactcctgcagtccaacagagaagtgatt
gtgaaacttgctgaagtggctttcaaacagctgatgaagggcaatgtgatgttctataag
gaggacctgattgagagcggcatagatgtcactgatgactctatgtattctaggatttgc
actgagatctttaagaaggaatctgtgattcatcagaggaaagtctacagcttcattcat
ctcagccttcaggagtttcttgctgctttctacgtaatatattgctttttaatgaagaac
atagaaccaatacaattttttctgcatgaatttacatcttacacatttaaagtctctctg
tataatctattaagatcagcagtaaataaagcactcataagtaagaatggtcagctggat
ctgttcttgcggttcctgctaggcgtctcactgaagtccaatcagagactcttacaggat
ctactgacacacacagagatcagattagagagcatcaagggaaccacacaggacattaaa
gagatgatgaaagatatacataatagttatcgtctctctgctggtcagtccatcaatctg
ttcctctgtctgctggaagtgaaagatcagactctgtccagagagattcaggagtttttg
aaatcagacaaacactcagagaagaaactctctcctgctcactgctcaacaatctcctac
atgcttcagacgtcagaggagccgctggataagcttgatctcaagaaatacaacacatca
gatgaggggagaagaagactgataccagctgtgattaactgcagaaaagctatactctct
ggctgtggtccctcagatcagcattgtgaaattgtgtcatcagctttaaaatcttcaaat
tgtttcctgagagagctggatctgagtaacaatgacctccaggattcaggagtgaagctg
ctctctgatggactgaagaggccaaactgtcagctgcagatactgaggtttgctgtctgt
aatcttactgctcagtgttgtgagagtttgtcatcagctctacaatcctcaaactgtgtc
ctaaaagagctggatctgagtaacaatgacctgcaggattcaggagtgaagctgctctct
gatggactgaagagtccaaactgtcagctgcagatactgaggcttgctggctgtaatctc
actgctcagtcttgtgagagtctgtcatcagctcttcaatcctctaactgtgtcctgaga
gagctggatctgagtaacaatgacctgcaggattcaggagtgaagctgctctctgatgga
ctgaagagtccaaactgtcagctgcagatactgaggttgtcaggctgtatggtgacagag
gaaggctgtggctatttgtcttcagctctgagttcaaacccctcacacctgagagagctg
gatctaagctacaatcacccaggagattcaggagtgcagctgctcaaacacaaactggag
gatccagactatacactgcagatactcaatgttgatcatggaggagagatcaggataaca
acaggcctacaaaaatacacctgtgatctcacactggatccaaacacagctcacactaag
cttgagctgtctgacgagaacaggaagatcactcatgagtttgagcgtcagcagtatcct
gatcatccagacaggtttgacggtgttcctcaggttctgagtgttcagagtctgactgga
cgctgttactgggaggctgaatggagtggagataatgctgatatttcagtgtcatataaa
ggaatcaacaggaaaggagtgaaagaagactctatgtttggatggaatgaaaagtcctgg
agtctggactgctctgataacagattctctgtctggcacaataataagagcactaatata
ccttctgtcagttcatcctctaatagagtaggagtgtatctggactggtcagccggttct
ctgtccttctacagcgtctctgacacacacacactcacacacttacacacattcaacacc
acattcaccgaacccctctatgctggatttacagtttattatgattcctcagtgtctctg
tgtgatattaaatcttgtaaatcctctttctga
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