Puntigrus tetrazona (Sumatra barb): 122355612
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Entry
122355612 CDS
T08985
Symbol
valopb
Name
(RefSeq) vertebrate ancient long opsin b
KO
K04256
c-opsin
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ptet01009
]
122355612 (valopb)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ptet04030
]
122355612 (valopb)
Protein phosphatases and associated proteins [BR:
ptet01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122355612 (valopb)
G protein-coupled receptors [BR:
ptet04030
]
Rhodopsin family
Vision
Opsin
122355612 (valopb)
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7TM_GPCR_Srv
7tm_4
7TM_GPCR_Srsx
FSAP_sig_propep
Motif
Other DBs
NCBI-GeneID:
122355612
NCBI-ProteinID:
XP_043110045
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Position
12:12766125..12773695
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AA seq
399 aa
AA seq
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MPALIAVMESFGSSVTESTDIATPDDPFSGPLKSVAPWNYTFLACLMFIVTSLSITENFT
VMLVTFRFKQLRKPLNYIIVNLSVADFLVSLTGGTISFLTNARGYFFLGVWACVLEGFAV
TFFGIVALWSLAILAFERYFVICRPLKNVRLGVKHAAMGLVFVWTFSFIWTIPPVFGWNS
YTVSKIGTTCEPNWYSTDYYDHTYIITFFVTCFILPLGVIIISYGKLMQKLKKVSNTHGR
LGNARKPDREVARMVIVMIVAFMVGWTPYAAFSITVTACPTIHIDPRLGSIPAFFSKTAA
VYNPIIYVFMNKQFRKCLIQMFKGNVTNLDSTNLNQTSDKGGITATAESHLGEMSTIAAR
VPMSVCNMEKSEDEEEEAEQSGNGGPKQLPLSDSRVCPL
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccttaatcgctgtcatggaatcgtttgggtcttcggtcaccgagtctaccgac
atcgccacaccggacgatccgttctccggtcccctcaaatccgtcgcgccctggaattac
actttcctcgcctgtctgatgttcatagtgacttcactgtctataacagagaacttcacc
gttatgcttgtgacgtttaggttcaaacagttaaggaaaccgctgaattacattattgtt
aatctatctgtcgctgattttctagtttcgctgacaggaggcactataagttttctaact
aatgcacgaggttacttcttcctgggcgtctgggcgtgcgtgctggagggattcgctgtc
acttttttcgggattgtggctttgtggtctttagcaatcttggcatttgagcgttatttt
gtgatctgtcgtcctctgaaaaatgttcggctgggagtcaagcacgcagctatgggtctt
gtttttgtttggaccttctccttcatctggacaatcccaccagtttttggctggaacagt
tatacagtcagtaaaattggtaccacctgtgaacccaactggtactcgactgattactac
gaccacacctacatcatcacctttttcgttacgtgttttatccttcctcttggtgtgatc
attatctcctatggcaaacttatgcagaaactcaaaaaggtgtcaaacacccatggaagg
ctgggcaatgcgcgtaagcctgaccgagaggtggcgaggatggtcattgtaatgatagtt
gcgttcatggttggatggacaccatatgccgcgttctcaattactgtcacagcctgtccc
acaattcatattgatcctcgcctgggctcaataccggcctttttctcaaagactgcagct
gtgtacaatcccatcatctatgtcttcatgaataagcagttcaggaaatgtctgatccag
atgtttaaaggaaatgtcaccaatttggactccaccaatctgaaccagacatcagacaaa
gggggcatcactgccacagcagagagtcaccttggagagatgtctaccattgctgctcgc
gtgcctatgtctgtgtgcaacatggagaagagtgaggatgaagaggaagaggcagagcaa
agcgggaatggaggtccaaagcagctccctttatctgatagtcgagtatgtcctttgtag
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