Puntigrus tetrazona (Sumatra barb): 122355762
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Entry
122355762 CDS
T08985
Symbol
cdh12a
Name
(RefSeq) cadherin-12a
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ptet04515
]
122355762 (cdh12a)
Cell adhesion molecules [BR:
ptet04515
]
Cadherins
Major cadherins
122355762 (cdh12a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_4
Cadherin_2
Cadherin_CELSR2_9th
Stevor
RIFIN
7TM_GPCR_Srw
Motif
Other DBs
NCBI-GeneID:
122355762
NCBI-ProteinID:
XP_043110259
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Position
2:13174143..13213126
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AA seq
800 aa
AA seq
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MLMGNCLLLFLWCLLDKSFVSPLHSSSQSRMGKEQHRNMMAHRKHGMMGVHRVKRGWVWN
QFFVLEEYMGSDPQYVGKLHSDLDKGDSMVKYTLSGEGVGSIFTIEPNTGDIHALRSLDR
EEKPYYTLRAQAVDVLTGRPLEPESEFIIKVQDINDNEPRFLEGPYSASVPEMSPVGTYV
TQITATDADDPTYGNSARIVYSILHGQPYFSVDPKTGIIRVALPNMDREVKEMYQVVIQA
KDMGGQLGGLAGTTTINITLRDVNDNPPRFSKSIFHLRVPESSPVGSSVGRVKAHDLDSG
KNAEVEYSIVPGDGGSMFDIYSNKNTQEGTVILKKRLDYETRKAYTFKVEASNAALDHRF
LHLGPFKDTATVKVNVLDVEEPPVFSRLSYSMETYEDTPVGIIVGAVTAEDLDVGNSPVR
YSVEWRKDSENHFDIDPVEGTLSVSEALDREINTEHNVTVVATKVNNPLLSSKVTVIIKV
LDVNEFPPELAFAYETFVCENAKVGQVIQIISATDRDMPAVEHRFYFKSPSQTRNRNFTI
RDYGNNTAGVVTRRGGFRRLEQSMYLVPVIVEDGGYPIRSSTGTVSVRVCTCDTDGSLVS
CSAEAIFFPMGLSTGALMAILLCIVILLVMVVLYMGLRKQKKKDTLMSSKEDVRDNVIHY
DDEGGGEEDTQAFDIGTLRNPKGIKETAQLQKIRSEDEPDRASACVSNEDSEDIRAYIHH
CLLENSTPPYDSLVTYAYEGEGSVAESLSSIESWVLEPKEDYRNLCDWGPRFKTLAGIFK
EHESKDTEKTANEALNDRLD
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgctcatggggaactgtttgctgctgttcctctggtgcctcttagacaaaagcttcgtt
tcgcccctccactcttcatcccagagcaggatggggaaggagcagcacaggaacatgatg
gcacataggaaacacggcatgatgggagttcacagagtcaagagaggatgggtgtggaac
cagttctttgttctggaggaatacatgggatctgatccgcagtatgttggaaagcttcac
tctgacctggataagggagatagtatggtgaagtacacactctcaggtgaaggagttggc
tctattttcacgatcgagccaaacaccggagacatccatgccttaaggagcctggaccga
gaagagaagccttattacacactgagagcgcaggctgtggacgtgctcacaggcagaccc
ttggagcccgagtcggagtttattatcaaagtccaggacatcaatgacaatgagccaagg
ttcctggagggcccatactcggctagcgtcccagagatgtcacccgtcggcacatatgtg
acacaaataaccgccactgacgctgatgaccctacttatggaaacagcgcacggattgtg
tacagcatccttcatgggcagccctatttctctgttgaccccaagacagggatcataaga
gttgccttacccaacatggacagggaagttaaggaaatgtaccaggtggtcatacaggct
aaggacatgggcggccagcttggaggtttagctgggaccacaaccatcaatatcactctt
cgtgatgtcaacgacaaccctccacgtttttcgaaaagtatctttcacctgcgcgttcct
gaatcttcacctgtgggctcgtcggtggggagggtcaaagctcatgatctggattctggg
aagaatgctgaagtggaatatagcattgttcctggtgatggaggctccatgtttgatatt
tacagcaataagaacactcaagagggaacagtcatactgaaaaagcgtctggactacgag
accagaaaggcctacaccttcaaagtagaagcttcaaacgcagctctcgatcatcgattc
ctacatttgggaccttttaaggacactgccacagtgaaagtgaatgttctggatgtggag
gaacctcctgtcttcagccggctgtcttatagcatggagacatacgaggacacaccagtg
ggcatcatcgtcggagccgtaacagccgaggacctagatgtaggcaacagtcccgttaga
tactctgttgagtggagaaaggactccgaaaaccacttcgacattgaccctgttgaagga
actctgtccgtcagcgaagccctggacagagagataaatacagaacacaacgtcactgtt
gtagcaacaaaagttaacaaccccctgctgtccagcaaagttactgtcataatcaaagtg
ctggatgtcaatgaatttcctccagaacttgcctttgcgtatgagacatttgtttgtgaa
aatgcaaaagtaggacaggtgattcagatcatcagcgccacagacagagacatgcccgct
gtcgagcaccgattctacttcaaatccccttcacagaccaggaacagaaacttcacaatc
agggactatggaaacaacacagctggagtggtgaccaggcgaggggggttccggagactg
gagcagagcatgtacctggtgccggtcattgtggaggacggcgggtatccgatccgaagc
agcactgggacggtgtcggtgcgagtgtgtacctgcgacacagacggctccctcgtttcc
tgcagtgcggaagctatcttctttcccatgggactcagcactggagctttaatggccatt
ctgctgtgcattgtcattctgctggtgatggtggtgctctatatgggcctgagaaaacaa
aagaagaaggacacgctgatgtcgtctaaagaggacgtccgggacaatgtgatccactac
gacgatgaagggggtggggaagaggacacccaagcctttgacataggtacgttacgcaat
cccaaaggcatcaaagagacggcgcagctgcaaaaaataagatcagaggatgagcctgat
cgggctagtgcctgcgtttccaacgaggacagcgaggacatccgagcctacatccatcac
tgtcttctggagaactcaacacctccgtatgactccctggtcacgtatgcatatgaggga
gagggatcggtggccgagtctctcagttccattgagtcctgggtgcttgaacccaaggag
gattacagaaatctctgtgactggggtcctcgcttcaaaacactggctgggatatttaaa
gagcatgagtctaaggacacggaaaagacggcaaatgaagcactaaatgacagactggac
tga
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