Puntigrus tetrazona (Sumatra barb): 122355786
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Entry
122355786 CDS
T08985
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ptet04054
]
122355786
Pattern recognition receptors [BR:
ptet04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
122355786
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Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
FISNA
PRY
NOD2_WH
LRR_6
SPRY
LRR_4
SAM_KSR1
Motif
Other DBs
NCBI-GeneID:
122355786
NCBI-ProteinID:
XP_043110303
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All DBs
Position
1:28964306..28981253
Genome browser
AA seq
1090 aa
AA seq
DB search
MSLGEKTEERCAQLQRSSDQSCVSVKTNRSMNEPLQLSGETGPTDSLPVIHNDCDTCVCH
SEKTEEGCSRSQKTEPSCAESLVADLNFMDEAVTAHHISLGTDDQTAVQLKDCPQTMNDV
LKRVKEQHKTRMKNKYEKFSEGTKLQQNKCFLNRIYTQLYIIEGEREGVNKEHEVLRMEK
SARTKQFEDNLINYNDIFKASPKPGPEEKDQIKTVLTKGIAGIGKTVSVQKFILDWAEGK
ANQDVDFMFVLPFRELNLIRDHQYSLHRLLLDFHPELQDLDSKIYEECKVVFIFDGLDES
RITLMFSDDQKVCDVTETSSVSVLMSNLMKGELLPSALIWITSRPAAANQIPSKYINRLT
EIQGFTDPQKEEYFRKRISDQHQASRIISHIRRARSLHIMCHIPVFCWISSTVLQKILEE
DLSAEIPQTLTEMYIHFLLIQINIRNQKYEGRDPEKLLQSNREVIVKLAELAFRQLMKGN
VMFYEEDLIESGIDVTDASVYSGICTEIFKEESVIHQKKVYSFIHLSIQEFLTAIYAFHC
YLMKIKEPLKLLETFKQHNSNKDPLYELLTSAVDKTLGTKNGHLDLFLRFLLGISLESNQ
RLLQDLLTHTENSSDSTRRTTQYIKEKIKDLYVFYNLSSGQSINLFLCLLELKDHTLSRE
IQEFLKSDKHSEKKLSPAHCSTISYMLQMSEETLGELDLKKYNTSDEGRRRLIPAVINCR
KAILSSCNLNSHCCESLSSTLQSSNSVLRELHLSNNDLQDTGVKLFSDGLKSQKCQMQLL
SLANCNLTNQSCKAVSSALQSSNSVLRELDLSNNDLQDSGVKLLSDGLKSPNCQLEILRL
SGCMVTEEGCGYLSSALSSNPSHLRELDLSYNHPGDSGVQLLKHKLEDPNYKLKILNVDY
GGQIMMTAGLRKYACNLSLDPNTAHTQLILSEDNKETACKKDHQQYPDHPDRFDEVPQVL
CGESLTGRHYWEAEWCGFSAEISVTYKEISRKGGSDDCKFGYNDKSWNLWCSKNRFVLRH
NKNFTDIPAIPSSSNRVGVYLDWSGGSLSFFSVSDTHTLTHLHTFNTTFTQPLYAGIGVY
DGSSVLLFYI
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcggtgagaagacagaggagagatgtgctcagctccagagatcttcagatcag
agctgtgtgtctgtgaagactaacagatccatgaatgaacctcttcagctcagcggtgaa
actgggccgactgattctctacctgttatccacaatgactgtgacacttgtgtatgtcac
agtgagaagacagaggaaggatgttctcgttcccagaaaacagaacccagctgtgccgag
tctttagttgcggatcttaattttatggatgaagctgtgaccgctcatcacatcagtttg
ggaacagatgaccagacggcagtccagctgaaggattgtcctcaaacaatgaatgatgtt
ctgaagagagtcaaggagcagcacaaaaccagaatgaaaaacaagtatgagaaattttct
gagggaactaaactccaacagaataaatgcttcctgaacaggatttacacacagctatac
attatagagggagagagagaaggagtgaataaagaacatgaggttttacggatggaaaaa
tcagccagaacaaaacaattcgaagacaatctgatcaattacaatgacatctttaaagcc
tcacctaaaccaggacctgaggagaaagaccagatcaagactgttcttactaaaggcatc
gctggaatcggaaaaactgtctctgtgcagaagttcattctggactgggctgagggaaaa
gccaatcaggatgtagatttcatgtttgtgcttccatttcgagagctgaacttgatcaga
gatcatcagtacagtcttcacagacttctgctggactttcatcctgaacttcaagatctg
gactcaaagatttatgaggagtgtaaagttgtgttcatctttgatggtctggatgaaagc
agaatcacactgatgttttcagatgatcagaaagtgtgtgatgtgactgagacttcatca
gtgagtgtgttgatgtcaaacctcatgaaaggagagctgcttccctctgctctcatctgg
atcacctccagaccagcagcagccaatcagatcccctccaaatacatcaaccgtctgaca
gaaattcagggattcactgatcctcagaaggaggaatatttcaggaagagaatcagtgac
cagcatcaagccagcagaatcatctcacacatcagaagagcaagaagcctccacatcatg
tgtcacatccctgtcttctgctggatctcatccactgtgcttcagaagatcctggaagaa
gatctgagtgcagaaatcccccaaactctgactgaaatgtacatccacttcctgctgatt
cagatcaacataaggaaccagaagtatgaagggagagatccagagaaactcctgcagtct
aacagagaagtaattgtgaaacttgctgaattggctttcaggcagctgatgaagggcaat
gtgatgttttatgaggaggacctgattgagagcggcatagacgtcactgatgcctcagtg
tattctgggatttgtactgagatctttaaggaggaatctgtgattcatcagaagaaagtc
tacagcttcattcatctcagtattcaagagtttctcactgctatatatgcttttcactgc
tatttaatgaaaatcaaggaaccactaaagcttctggaaacattcaaacagcacaattcc
aataaagaccctttgtatgaactactaacatcagcagtagataaaactcttgggactaag
aatggtcacctggatctgtttctgaggttcctgctgggcatctcactggagtccaatcag
agactcttacaggatctactgacacacacagagaacagctcagacagcaccaggagaacc
acacagtacattaaagaaaagatcaaagatctatatgttttttataatctctcatctggt
caatctattaatctgttcctctgtctgctggaattgaaagatcatactctatccagagag
attcaggagtttttgaaatcagacaaacactcagagaagaaactctctcctgctcactgc
tcaacaatctcctacatgcttcagatgtcagaggagacactgggtgagctagacctcaag
aaatacaacacatcagatgagggaagaagaagactaataccagctgtgatcaactgcaga
aaagctattctttctagctgcaacctcaatagtcactgctgtgagagtttgtcctcaact
cttcaatcctcaaactctgtcctgagagagctgcatctaagtaacaatgacctgcaggat
acaggggtgaagctgttctctgatggactgaagagtcaaaaatgtcagatgcagttactg
agtcttgccaattgtaatctcaccaatcagtcctgtaaagctgtgtcatcagctcttcag
tcctcaaactctgtcctgagagagctggatctgagtaacaatgacctgcaggattcagga
gtgaaactgctctctgatggactgaagagtccaaactgtcagctggagatactgaggttg
tctggctgtatggtgacggaggaaggctgtggttatttgtcttcagctctgagttcaaac
ccctcacacctgagagagctggatctgagctacaatcacccaggagattcaggagtgcag
ctgctcaaacacaaactggaggatcccaactataaactgaagatactcaatgtggattat
ggaggtcagatcatgatgacagcaggactacgaaagtatgcctgtaatctctcactggat
ccaaacacagcacacactcaactcattctgtctgaggacaacaaagaaacagcatgtaaa
aaagatcatcagcagtatcctgatcatccagacagatttgatgaggtgcctcaggttctg
tgtggagagagtctgactggtcgccattactgggaggctgaatggtgcggatttagtgct
gaaatatcagtgacatataaagaaatcagcaggaaaggaggaagtgatgactgtaagttt
gggtacaatgacaaatcctggaatctgtggtgctctaaaaacagatttgttctccgtcac
aataagaacttcactgatatccctgcaatcccttcatcctctaatagagtaggagtttat
ctggactggtcaggcggctctctgtccttcttcagcgtctctgacacacacacactcaca
cacttacacacattcaacaccacattcactcaacccctctacgctgggattggggtttat
gatggttcttcagtgcttctgttttatatttag
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integrated database retrieval system
