KEGG   Puntigrus tetrazona (Sumatra barb): 122355830
Entry
122355830         CDS       T08985                                 
Name
(RefSeq) elongin-B-like
  KO
K03873  elongin-B
Organism
ptet  Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ptet00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122355830
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ptet04121]
    122355830
   03400 DNA repair and recombination proteins [BR:ptet03400]
    122355830
Ubiquitin system [BR:ptet04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     122355830
   Cul5 complex
     122355830
DNA repair and recombination proteins [BR:ptet03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     122355830
SSDB
Motif
Pfam: ubiquitin Rad60-SLD
Other DBs
NCBI-GeneID: 122355830
NCBI-ProteinID: XP_043110329
LinkDB
Position
12:5762494..5765843
AA seq 168 aa
MSHTIRNISRHTSSYASGAGNDVAQCLFLVHCGIVEGCEVVNGGYRTAKMDVFLMIRRHK
TTIFTEAKESTTVYELKQIVEGILKRSPEEQRLYKDEQPLEDNKTLGDCGFTNQTARPQA
PATVGLAFRISDDAFETLQVESFSSPPELPDVMKPQDSGSTANEQSVQ
NT seq 507 nt   +upstreamnt  +downstreamnt
atgagtcatactattcgtaatatctcgcgccacacgagttcatatgcttccggagcgggc
aatgacgtagcacaatgcttgttcttggtgcattgtgggatagtggagggttgtgaggtg
gtaaatggtggctacagaaccgctaaaatggatgtattcttaatgatcaggcgtcacaaa
accacgatcttcacagaggctaaagaatccacaactgtctatgaattgaaacaaattgtg
gagggcatcctgaagaggtcccccgaggaacagagactatacaaggatgaacagcctcta
gaagacaataagacattaggagactgtggctttacaaatcagacagctcgaccacaggct
cctgcgactgtaggactggcctttcgtatcagtgatgatgcatttgagaccctgcaggtg
gaatcattttccagccctcctgaacttcctgatgttatgaagccacaggactctggcagt
acagccaatgaacagtcagtgcagtga

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