Puntigrus tetrazona (Sumatra barb): 122356178
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Entry
122356178 CDS
T08985
Symbol
lingo2b
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122356178 (lingo2b)
Membrane trafficking [BR:
ptet04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
122356178 (lingo2b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_1
ig
LRR_5
Ig_2
LRRNT
V-set
C2-set_2
LRR_9
Ig_C17orf99
Ig_6
Herpes_gE
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
122356178
NCBI-ProteinID:
XP_043110610
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All DBs
Position
13:complement(5874187..5888825)
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AA seq
607 aa
AA seq
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MLFSPFSCALGLSLLPLLLFQCPXHACPARCECSVPTRSVSCHRRRLAQVPEGIPIETRA
LDLSKNRLRIVTPQNFSSLLLLEELDLSNNLLSSVEPGSFRTQPRGRSXRLRSNQLTLLP
RGALAGLSELTLLDVSQNRLVILLDYGFEEQRRLRVLELSDNELVFIAPRAFSGLASLRS
LTLQRCNLSTVPTHALAHLHGLTSLRLRDLGITELQAHAFKGLPRLKHLEVDRWPLLEGF
PTSALQGLNLSTLSITHTNXASVPVVTHLLYLTHLNLSYSRIRVLPAGWLRGMDRLEVVR
VRQSNLLSVEPQAFQGASSLRLLDLCYNRLSTLERSVFPASEALQTLLIGQNPLVCDCRL
RWLLERTPPLLYGDVQPECSAPAPLAGKPLRDLMEPQISKHVICTKPRVVSMATYPAQTE
EGQRAWLYCSADGAPPPSVSWLTPHRRHITTKSTGRMVVHTNGSLEFRMAEPQDSGMYVC
VASNPAGNATLSITVAVKSSGIRDRALYANRSFLFDSDYNSSLINGTEEYTIRVVLDFTT
ILVSTAMGCLSFLGVVLFCFLLLFAWSRGKGKHRGSVDIQYVPRKRKGANSELTETSGPR
RVNMKMI
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgctgttctctccgttctcttgtgctctggggctctccctcctgccactcctcctgttt
cagtgcccgncccacgcctgcccagcccgctgcgagtgctctgtgcccacgcgttctgtg
tcatgccatcgcagacgcttagcgcaggtgcctgaaggcatccctatagagacaagggca
ctggacctcagtaaaaaccggctgcgcattgtgacaccacagaatttctcctcactgctg
ttgcttgaggagctggacctcagcaacaacctgttgtcatctgtggaacctggcagcttc
cgcactcagccgcgcggccgctcgnctcgactgcgcagcaatcagctgactctgctgccg
cgtggagcgctggccggcctcagcgagctcactctgctggatgtcagtcaaaaccgtctt
gttattctgctggactacggctttgaggagcagcggaggctgcgggtactagagctgagt
gataatgagctagtgtttatcgccccacgggccttcagcggcctggcgtccctgcgctct
ctaacgctgcagcgatgcaacctgagcacagtgcccacacatgctctcgcacatctgcat
ggcctaaccagcctgcgattgcgggacttgggaatcacggagcttcaagcacacgcattt
aagggtctgccacgactgaaacacctggaagtggaccgctggcctttgttagaagggttt
ccgacctccgctttgcaggggctgaacctcagcacactctccattacccacaccaacnna
gcgtccgtgccagtggtgacacatctactgtatctaacgcatctcaacctgtcttacagc
cgtatacgtgtcctgccagcagggtggttacggggaatggaccggctggaagttgtgcgt
gtacgacagtctaacctgctcagtgtggaacctcaagcctttcaaggagcctcttcgctg
cgccttcttgacctttgttacaaccgtctctccacgcttgaaagaagtgtttttcctgct
tctgaggccctgcagactcttctgattggccagaacccgttagtgtgtgactgtcgtcta
cgctggctcctggagaggactccacctttgctgtatggtgatgttcaacctgaatgtagt
gctcctgctcccttggctgggaagccacttagggacctgatggaacctcaaatctctaag
cacgttatctgcaccaagcccagggttgtctcaatggcaacttacccagcacagacagaa
gaaggacagagagcttggctatactgcagtgcggacggggctccaccaccttctgtgtca
tggctgacaccgcataggcggcacattaccacaaagagcacgggaagaatggtggtccac
acaaatggctcgctggagttccgcatggcagaacctcaggatagtggcatgtacgtgtgc
gtggcatcgaacccagcaggcaatgccactctgtccatcactgtagctgtgaaaagctct
ggaatcagggatagagccctttacgccaaccgcagctttctgtttgactccgactacaac
agttccctgattaatggcacggaggagtacaccatcagggtagtgctggacttcaccacc
atcctggtctccacagcaatgggctgcctcagcttcctgggtgtcgtcttgttctgtttc
ttgttgttgtttgcatggagccgtggcaaagggaagcacagaggtagcgtggacattcag
tacgtcccacgaaagcggaaaggcgcaaactcagaacttacagaaacaagtgggcccaga
cgagtcaacatgaagatgatctaa
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