Puntigrus tetrazona (Sumatra barb): 122356325
Help
Entry
122356325 CDS
T08985
Symbol
mnat1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03022
Basal transcription factors
ptet03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122356325 (mnat1)
09124 Replication and repair
03420 Nucleotide excision repair
122356325 (mnat1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptet03021
]
122356325 (mnat1)
03400 DNA repair and recombination proteins [BR:
ptet03400
]
122356325 (mnat1)
Transcription machinery [BR:
ptet03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122356325 (mnat1)
DNA repair and recombination proteins [BR:
ptet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122356325 (mnat1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
TRAF3_RING
zf-UDP
zf-C3HC4
zf-RING_2
TRAF6_Z2
zf-P11
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
122356325
NCBI-ProteinID:
XP_043110818
LinkDB
All DBs
Position
13:11661587..11678612
Genome browser
AA seq
309 aa
AA seq
DB search
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVEMLFVRGSGNCVQCNTPLRKSNFRV
QLFEDPAIDKEVEIRKKVLKIYNKRELDFSVLEEYNDYLEQVEDIVFNLTNNVDVERTKQ
IMEQYQRDNKDVIQRNKAKLTREQEELEELLLQEQQDSEQRRLETLQEEQRQLQAKRKNK
QALLDELESSKLPAAVLLAQHKDRATQLETQIEKQKQNVKPANIFSTGIMMGQTVSFASV
SRVEEVLYMYQSQCIDTYGPPVPELEQLGRLGYLNHVRTASPQDQAGGYTSGLACHRAIQ
DAFSGLFPS
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcagggatgcccgaggtgcaagacgactaaatacagaaacccatctctgaag
ctgatggtgaatgtgtgcggccacacgctgtgtgagagctgtgtggagatgctgtttgtc
cgtggctcaggtaactgtgtgcagtgcaacactcctctcagaaagagtaatttccgcgtg
cagctctttgaagatccagccattgataaagaggtggagatccgcaagaaggtgctcaaa
atctataataagagggaattagatttttccgttctggaagaatataatgactacctggag
caagtggaggacattgtgtttaacctgactaataacgtagatgttgaaaggaccaagcag
attatggaacagtaccagcgagataacaaagacgttatacagagaaacaaagccaaatta
acacgtgagcaggaggagttggaggagctgttgttacaggagcagcaggattcagagcag
aggagactggagaccctgcaggaggaacagagacaactacaggccaagagaaaaaacaaa
caggccctgctggatgaactggaaagttccaagttacctgcggctgtgctgttggcccaa
cataaagatcgagctactcaactggagacccagatagaaaaacaaaagcaaaatgtcaag
ccagcaaacatcttttcaactggaataatgatgggtcagactgtttcctttgcttccgtg
tctcgtgtggaggaggtgttgtacatgtatcagtctcagtgcattgacacgtatgggccg
cctgttccagaactagagcagttgggccgattagggtatctgaatcatgtgcgcacagcg
tctccgcaggatcaggctggtggttatacatcaggactggcatgccatcgtgccatccaa
gatgctttcagtggcctcttcccctcataa
DBGET
integrated database retrieval system
