Puntigrus tetrazona (Sumatra barb): 122356340
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Entry
122356340 CDS
T08985
Symbol
chmp5a
Name
(RefSeq) charged multivesicular body protein 5 isoform X1
KO
K12198
charged multivesicular body protein 5
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04144
Endocytosis
ptet04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122356340 (chmp5a)
09143 Cell growth and death
04217 Necroptosis
122356340 (chmp5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122356340 (chmp5a)
Membrane trafficking [BR:
ptet04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
122356340 (chmp5a)
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Gene cluster
GFIT
Motif
Pfam:
Snf7
NPV_P10
Prefoldin_2
Histone_HNS_N
Hydantoinase_B
Alpha-E
Big_3_3
C2_ITFG1
DUF848
HrpB7
DUF6674
Spectrin_3
DUF87
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
122356340
NCBI-ProteinID:
XP_043110878
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Position
2:14428931..14432593
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AA seq
219 aa
AA seq
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MNRIFGRSKQTPTPNLSDCIGNVDTRVESIDKKIARIDAELMKYKDQMKKMRDGPSKNAV
KQKAMRVLKQKRMYEGQRDQLSQQSFNMEQANYTIQSLRDTKTTVEAMKIGAKEMKKAYK
QVKMDQIEDLQDQLEDMMEEANEVQEALSRSYGTPEIDEDELEAELDALGDELLLDDDSS
YLDEASSAPSIPEGMPSDTKTNKDGVLVDEFGLPQIPAT
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgaattttcggacggagcaaacaaacgcctactcctaacctttctgactgcata
ggcaatgtggatacgagggtcgagtcaatcgataagaaaatagcgagaatcgacgcagag
ctaatgaagtataaggaccagatgaaaaagatgagggatggaccctcaaaaaatgcagta
aaacagaaggcgatgagagtgctgaaacaaaagagaatgtatgaaggtcaaagagatcag
ctttcccaacagtcatttaacatggaacaagccaactatacaatccagtctttaagggac
acaaaaacaacagtggaggctatgaagattggagcaaaagaaatgaagaaagcatataaa
caagtgaaaatggatcaaattgaagacctgcaggatcagctggaagacatgatggaagag
gccaacgaggtgcaggaagctctcagtcgcagctatggcacgccagagatcgatgaagat
gaactagaagcagagctggatgctctgggagatgagttactgctggatgatgacagctct
tacttagatgaagcatcatctgcgccctccattcctgaaggaatgcccagcgacactaaa
accaataaggacggcgttctggtggatgagtttggtctaccacagatccctgccacataa
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