Puntigrus tetrazona (Sumatra barb): 122356421
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Entry
122356421 CDS
T08985
Symbol
rab11fip5a
Name
(RefSeq) uncharacterized protein rab11fip5a isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122356421 (rab11fip5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122356421 (rab11fip5a)
Membrane trafficking [BR:
ptet04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
122356421 (rab11fip5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF1501
DUF4635
Motif
Other DBs
NCBI-GeneID:
122356421
NCBI-ProteinID:
XP_043111032
LinkDB
All DBs
Position
13:5177731..5198404
Genome browser
AA seq
1629 aa
AA seq
DB search
MSFAKSDEEQRWVPTHVQVTVLRARGLRAKGKHGTSDVYTIIQLAKEKYSTCVMEKTTDP
EWGEECSFELLPGVLEEGGRDAYPPGAGDLTLTVMHRALIGLDVFLGQAVIPLDEAFQQR
KYMKNEWYRLHSKTGKKEKERGELQLTVQFTRHNLTASMYDLSMKDKPRSAFDKLRERMR
AKKRSTEEDSSSAIVPGGYGALARMRGRLPSDGGGEEDYEDDEGGEARRSKMRSFFLRGR
LRKSSDTRSSTSLGSESSESSSRGGSLSPTAGISVVVSDLSNSPSNSSNLTADNSPEHTV
APSPQVSPVRHVMYDISLPVPHSVTSENDTPILLPSVWVNGNPVETSPLTHHPPSLVLQQ
PQPVTQSGQPQATTLPAKPQKTQSAQPKSQETPLSKSQSKPRPDPLLPALGVLQKGSLSL
SLQNLSRRGEDKQSGGPVDGRRWSFDKPGEEEKAAIVAALEQAGRVTDEVEMETVIPAGE
TETQSKKRRGLFSHGKGDSAGKGPIMSKEEAERAQPLVEVKHKGWFSSKDSHSKPSPLVS
PQSDSCTICPIIPLTINDPSQSMADKNANPFTSPPPFFDVNLLLPQTQLNPFIQELHSVA
PVTPDVPCLFSSDLSQSDGNATPDLLRAGNQKEPAPMDILFDPLNSNFEGLTKNDDFEHF
AKDRLKSEEVNETMNLETPTAVFMKTNNQERLCELGGLMVSDTNYPTDLGQTVSASTAET
SKETAADTPQVSGSDVNYIHSSSNKPDLTAHVAHVFSEVDFNSSEISLPENSSVEFSDLN
TLACPYLAMSFHSKNKDGTHDTTLEDHPTIKQNTKCDDTQSSASKPNTIELPSSISFEFS
KGMSVSPETSQPEMLKFAKDIESVTVFEDPVPLCGDISSGDSLEQSTVISDSLGGVLDHQ
SIEHRLSPQSDIIQSNRIQSEEEFWGSNASLIQSMAVSGKSLVEATESSLFNVQSGQSLL
VSSALPVKNGEKTDAVMDTLLQNESGNGILEDVSSKDICSEIGDFVSENLIDGPSFPVLS
KSMSNDMHEDKQEKVSELPTSPFKKDNLVSQLSTISEEEEIMPSNGQTLPVGHLHLSTGI
RSGTEEDALDLNSVLSPGSVVLHSMYDSADSDQYLTCVSQQDFPVSSSLELTQEVKPRHG
LSEEDASESESLPNHIPNVALQDYMSAKGIPEKGCKQYEVMAENLNLSPEALPKEESPVD
VLPNNSLLDLLSATHTLSLKSAPSFNTSSENMIMSDFDEAVLQCSPSVDTVENFSKDMSP
IVVTSEMIAELEAQLAPLDSDTGLVDESPKVASFNIEPFGIVSEDNLHSVQLTDSDAFVS
KCSSEQTSSITQDLDLKNIFLPQTTEMNLRSTNKSLDANSKSADTHNDPEPNLKQIESLD
VNTDFWTTPAVQHSVTPDVFPVNWPTFSQPSAPSPYDQPTLASRHDRSFNFTSSLFDLSP
VASSTPHVAVDTNALSQLFPFPTIPRSSEVPRPGSAAPTMQAMNSTAYNPFLQDKTQTSD
HQSSPHPVKPLTPPDEKRSEGRSVLEKLKSTIHSGRTGQDADKKQLVEGGGTYYHLNHSE
LVSLLIQRDTELRQERKEYERRGALLEKREMELKKMKVVIRDLEDYIDTLLVRIMEQTPT
LLQVRTKMK
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcgcgaagagcgacgaggagcagcgatgggtgccgacgcacgtgcaggtaact
gtgctacgggcccgggggctgcgcgcgaagggtaagcacggcaccagcgacgtttatacc
atcatccagctggccaaagagaaatactccacctgcgtgatggagaagaccacggacccg
gaatggggcgaggagtgctcgttcgagctgctaccgggggtcctggaggagggagggcga
gacgcgtacccgcccggtgccggcgacctgaccctcaccgtgatgcaccgagctctcata
ggactggatgtgtttctgggccaggctgtcatacctctggatgaagcgtttcagcaacgg
aaatacatgaaaaacgagtggtaccggctgcattcgaaaactggcaaaaaggagaaagaa
cgaggggagcttcagctgaccgtgcagttcactcggcacaacctgacggccagcatgtac
gacctatccatgaaagacaaacctcgttctgctttcgacaagctcagagaacgcatgaga
gctaagaagcgctccactgaagaagattcctcttccgccatcgtccctgggggatacgga
gcactggcacgcatgcgggggcggctgccgagcgatgggggcggagaggaagactacgag
gatgatgaaggcggggaggcccgcaggagtaagatgagaagttttttcctgcgtgggagg
ttgaggaagtcttcagacacgcgttcgagcacgtcactgggctcggagagcagcgagtct
tcatcgcgaggcggcagcctcagcccgacggcaggtatcagtgtggtggtctcagatctg
tccaactctccgagtaacagcagcaacctcactgcagacaacagtccagaacacacagtg
gctccctcaccacaggtgtctcctgtcagacatgtcatgtacgacatcagcttaccagtg
cctcattctgtgacgtcagagaacgacacccctattctgcttccgtcagtgtgggtgaac
gggaatccagtggaaacatctcctctcactcaccatccgccgtcactcgtactacagcaa
cctcaaccagtaactcagtcaggtcaaccacaggcaaccacgctgccagccaagccccag
aaaacccagtcagctcagccgaaatcccaagagacaccgctatccaagtcccagtcaaag
ccaaggcccgatcccctgcttccagccctgggggtgcttcagaagggctctctctccctc
tccctgcagaacctctcccgccgcggagaagacaagcagagcggcggccccgtggatggc
cgtcgctggtccttcgataaacccggagaggaagaaaaagccgccattgtagcagcgtta
gagcaagctggaagagttacagatgaggtggagatggaaacagtgatacctgctggagag
acagagactcagagcaagaaaaggaggggcctgttctcacatgggaaaggtgattcggct
gggaaaggaccaatcatgagcaaagaggaagcagaacgtgctcaaccacttgtagaagtc
aaacataaaggatggttcagctccaaggactcgcacagtaaacccagcccactggtgtct
cctcagtcagactcctgtacaatctgtcccattatacccttgaccattaatgacccttca
cagagtatggctgacaaaaatgctaatcccttcacttctcccccacctttttttgacgtc
aatttgctcctcccacaaacacagctgaatcccttcattcaagagcttcattctgttgct
cctgtaactcctgatgtgccctgtctcttcagctcagacctctcgcaatctgatggtaat
gccaccccagatttgctgagggctggaaaccaaaaagaacctgccccaatggatatctta
tttgatcctttaaattctaacttcgaggggctgacaaaaaatgatgactttgaacatttt
gctaaggacagattgaaatcagaggaggtgaatgaaacaatgaatttggaaacaccaact
gctgtcttcatgaaaacgaataatcaagagcgtttgtgtgaattgggtggtttaatggtg
tcagatacaaattacccaactgatttaggacaaactgtttcagcaagtactgcagagaca
tctaaggaaactgctgcggacacacctcaggtttcaggaagtgatgttaattatattcac
tctagttctaacaagcctgacctcactgctcatgtggcacatgtcttctcagaggttgat
ttcaattcatctgaaatttccttgcctgaaaattccagtgtagagttttctgatctgaat
acacttgcatgcccttatcttgcgatgtcatttcactctaagaataaagacggcactcat
gacacaactcttgaagaccacccaacaatcaaacaaaataccaaatgtgatgacacgcag
tcatcagcatcaaaaccgaacactattgaacttccttctagtatctcttttgagttctca
aaggggatgtctgtgagtcctgaaacatcacagcctgaaatgctaaagtttgctaaagac
attgagtctgtgactgtctttgaagatcctgtgccactctgtggagacatcagctcaggt
gactccctggaacagtcaacagtgatatctgattccttaggtggagtactagaccaccag
tctattgagcaccgtctttctccacagtctgacatcattcaaagtaatagaatacaatcc
gaagaagaattttggggatcaaatgcctcactcattcaaagtatggcagtaagtggaaag
tccctagttgaagccactgagtcttcactattcaatgttcaatcaggacagagtttgctt
gtatcatctgctctgccagtgaagaatggagagaaaacggatgcagttatggacaccttg
ttacagaatgaatcaggaaatggtatcttagaggatgtcagtagtaaagatatctgttct
gaaattggagactttgtttctgagaacctaattgatggaccttcatttccagtactctca
aaatcaatgtctaatgacatgcacgaggacaaacaagagaaagtcagtgaattgccaact
agtccatttaagaaagataaccttgtaagtcagctcagcaccatcagtgaagaggaagaa
ataatgccttctaatggacagacacttcctgtaggacatctccatctctccactggaatt
agatcagggacagaggaggatgcattagatctaaactcagtgctctcacctggtagcgtg
gttctccacagcatgtacgacagtgcagattcagaccagtatcttacttgtgtatctcaa
caggatttcccagtttcctctagcttagagctcacacaggaagtgaaaccaagacatggt
ctttctgaggaagacgcttcagaatctgaatctttgccaaaccatatccctaatgttgcg
ctacaagattacatgtctgcaaaaggcataccagaaaaaggctgtaagcaatatgaggtc
atggcagaaaacttaaatctctctccagaagccttaccaaaagaagaatctcctgtagat
gttctaccaaataactccttattggacctcctgtcagcaacgcataccttatctctcaaa
tcagctccctcgttcaatacttcatcagagaacatgataatgtcagattttgatgaagca
gtgctgcagtgcagcccttcagtggacactgttgagaacttttccaaagatatgtcgcca
attgttgttacctcagaaatgatagctgaacttgaggctcagcttgcaccattagattca
gacacaggtctggtagatgagagcccaaaagttgcatcctttaatatagaaccttttggg
attgtatcagaggacaacttacattcagttcagttgactgattctgatgcatttgtatcc
aaatgttcttcagaacaaacctccagtatcactcaggaccttgacctaaaaaacatcttt
ttaccccagacaactgaaatgaaccttcgtagtactaacaaaagtctggatgcaaactct
aaatcagcagacactcacaatgacccagaaccaaatcttaaacaaatagagagtctagac
gtaaatactgatttctggacaactccagctgttcaacattctgtgacacctgacgttttt
ccagtgaactggcccactttttctcagccatcagccccttcaccctacgaccagccaacg
ctggcttcaaggcatgatcgtagctttaactttacatcgtctttgttcgacctttcacct
gtagcttcctcaacaccacatgtagcagtagacactaatgcgctgtcccagctattcccc
ttccctacaattccccgttcctcagaggtgccacgtccaggatctgctgctcctactatg
caggctatgaattctacagcatacaatccttttctccaggataaaacacagacatctgat
catcaaagcagtccacacccagtgaagccattgacacctcctgatgagaaaaggtcagag
ggtcgctcagtactagagaagcttaaatccaccattcactcaggacgaacaggccaggat
gctgacaagaagcagctagtggagggaggaggcacgtactatcacctgaaccacagcgag
ctggtgagtttgctgatccagcgggatactgagctcaggcaggagcggaaggagtacgag
aggcgaggggcactgctggagaagcgcgagatggagctaaagaagatgaaggtcgtgatc
agagatctagaggattacatcgacacgcttcttgtacgcatcatggagcagacccccacg
ctgctgcaggtccgcaccaagatgaaatga
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integrated database retrieval system
