Puntigrus tetrazona (Sumatra barb): 122356429
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Entry
122356429 CDS
T08985
Symbol
nrxn1b
Name
(RefSeq) neurexin-1a isoform X1
KO
K07377
neurexin
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122356429 (nrxn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122356429 (nrxn1b)
Membrane trafficking [BR:
ptet04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
122356429 (nrxn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
hEGF
MtrB
Motif
Other DBs
NCBI-GeneID:
122356429
NCBI-ProteinID:
XP_043111053
LinkDB
All DBs
Position
13:2314506..2424731
Genome browser
AA seq
1476 aa
AA seq
DB search
MILQMRHGVHLLWIGLVVCTLETGASLRFTGAEGQWASFPMWNACCESEMSFSMKTKSFK
GLLVYFDDEGFCDFLELHIQEGKLRLRFSIFCAEPASVLSDVFVSDNQWHEITIRRKFRN
TTLTVDKEVKWQEVKSKRRDMTVFSHLFLGGIPPELRLMSLQLTSDTVNDHTAFMGWITD
LKVNNTEPVIINSAGVSTGLCGSHNMCLNGGVCSVVDNEPKCDCSETGYQGKDCGEGLAH
LMMGDQEMEENVATFKGSEYFCYDLSLNPIQSSSDEITLSFKTLQRNGLMLHTGKSADYV
NLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNEWHDVKVTRNLRQHSGIGHAMVTISV
DGILTTTGYTQEDYTMLGSDDFFYIGGSPSTADLPGSPVSNNFMGCLREVAYKNNDVRLE
LSRMALKGDPKMKIHGVVAFKCENVATLDPISFETPESFITLPKWNTKKTGSISFDFRTT
EPNGLLLFSHGKPKQQTKEAKSPFPRKVDFFAVEMLDGLLYLLLDMGSGTIKTLAMNKKV
NDGEWYHVDFQRDGRSGTISINTIRTPYQAPGNSEILDLDDSLYLGGLPENKADMVFPTE
VWTALLNYGYVGCIRDFFISGQSKDIRRIAEVQKAAGVKTSCSKDAPKQCLSNPCQNNGI
CREGWNRYVCDCSGTGNLGLSCERDATILSYDGSKFMKVHLSVAVHTEAEDVSLRFRSQR
AYGVLMATTSRDSADTLRLELDTSRVRLTVNLDCDRINCTSSKGPETMFAGQNLNDNEWH
TVRVSRRGRSLKLSVDDLATVEGEIPGDHTQLEFHNIETGIVTEKRYLLITPSNFIGHLQ
SLTFNGKPYIDLCVNGDIDYCEVNAVIGFKNIIADPVTFRSCSSYLSLSTLQAYYSMHLF
FQFKTTSSDGLILFNSGDGNDFIAVELVKGFLHYISDLGNGAYLIKGNSNKPLNDNQWHN
VVISRDTNNLHTVKIDTKITTQTTMGARNLDLKGDLYIGGVPEEVYKELPKLVHAKEGFQ
GCLASVDLNGRLPDLVTEALACIGQIDRGCEGPSTTCQEDSCANQGVCIQQWEGFTCDCS
MTTYGGPLCNDAGTTYIFGRDGGLITYTWPPNDRPSTRADRLAMGFSTHLKEALLVRVNS
SSGLGDYLKLHIVNGYIVAIFNVGTDDINIEEKAKFVNDGKYHIVKFTRSGGNATLQVDD
LPVIERYPTGNIDSERLAIARQRIPYRLGRVVDDWLLDKGRQLTIFNSQMTIQIGGWEKD
HSRAFQGQMSGFYYNGLKVFNMAVEGDPNIRIEGSVRLVGEVQSSSISPQSSATVSRSET
STSVVEITTTSTSNQKIKPSTSEPQQTTDDLLVASAECPSDDEDIDPCEPSSGGLANPTG
PGVKSYPDQSEVFRESSSTTGMVVGIVVAAALCILILLYAMYKYLNRDEGSYQVDESRNY
ICNSAQSNGTVVKEKAMDGTSSVSKSKKNKNKEYYV
NT seq
4431 nt
NT seq
+upstream
nt +downstream
nt
atgattcttcagatgcgacacggtgtccatctcctctggattggactggttgtatgtact
ttggaaactggagctagtctccggtttactggcgcagagggacagtgggcctcgttcccc
atgtggaacgcttgctgtgagagcgagatgagcttcagcatgaaaaccaagagtttcaag
ggacttctggtgtactttgatgatgaaggcttctgcgatttcctggagctgcacatacaa
gagggaaaactcagactgcgcttttctattttctgtgctgaacctgcttctgtgctttca
gatgtgttcgtcagtgacaaccagtggcatgaaatcacaatcaggaggaaattcagaaac
actaccctcactgttgataaagaagtaaagtggcaggaggttaagtccaaaaggcgagat
atgactgtcttcagtcacttgttcttaggagggattccaccagaactgagattgatgtct
ttacagctgacatcggacactgtgaatgatcacactgcctttatgggctggataacggac
ttaaaagtcaacaatacagagcccgtcatcattaacagtgccggggtaagcactggcctc
tgtggctcacacaacatgtgcttaaacggaggtgtatgcagcgttgtcgataatgagcct
aaatgtgactgctctgaaaccggctatcagggaaaagactgcggcgaaggtctggcacac
ctgatgatgggcgaccaagagatggaagaaaatgtggcgacattcaaaggttcagaatac
ttctgctatgacctttctctgaacccgatccaaagcagcagtgatgaaatcacgctgtca
ttcaaaacactccaaagaaatggactgatgcttcacacaggaaaatctgctgactatgtt
aacctggcgctgaaaaacggagcagtttctctcgtcataaatttgggttctggggcattt
gaagctctggtggaaccagtcaatgggaaatttaatgacaatgaatggcatgatgtaaaa
gtaacaaggaatttgcgtcagcactcaggcattggacatgctatggtgacaatatctgtg
gatggaatactgaccaccacaggatatactcaagaggactacaccatgcttggatctgat
gactttttctacattggaggaagtcctagtacagccgacctgcctggatcaccagttagc
aacaactttatgggctgtctaagggaggttgcatataaaaacaatgatgttcgactggag
ctgtccagaatggccttaaaaggcgacccaaaaatgaagatacatggagttgttgccttt
aagtgtgagaatgttgccacattagatcccatttcttttgagacaccggaatccttcatc
acacttcctaaatggaacactaagaaaaccggttctatttcatttgacttccgcaccact
gagcccaacggacttctcctcttcagccatgggaaacctaagcaacagacaaaagaggcc
aagagccctttcccaagaaaggtagacttcttcgccgttgagatgctggatggtcttttg
tatttgcttctggatatgggatcaggcacaatcaagacactggctatgaacaaaaaagtg
aatgatggagagtggtatcatgtggacttccagagggatggaagatcaggtaccatctct
atcaacacaattcgcacaccgtaccaagccccaggaaacagcgagattcttgacctggat
gatagcctttatctaggagggctgccagagaataaagctgatatggtgtttcctactgaa
gtgtggactgctttgctcaactatggttatgtaggctgcatccgtgacttcttcatcagt
ggtcagagcaaagacatccgccgcatagctgaggtgcagaaagcagcaggcgtaaagacc
tcctgcagtaaagatgctcctaagcagtgtctcagtaacccctgccaaaacaatggaatc
tgcagggaagggtggaaccgttatgtatgtgactgctccgggacgggaaatcttggtctc
tcctgtgagagagatgccaccattctcagttacgatggcagtaagttcatgaaggtccat
ttatctgtagctgtgcatacagaggctgaagatgtctcgctacggttccgctcccagagg
gcatatggcgttctcatggcgaccacttctcgagactccgcagacaccctccgtttggag
ctggacacaagtcgagtccgactcacggttaatctagactgtgacaggataaactgtacc
tcgagcaaaggacctgagaccatgtttgctggtcagaatctgaatgataatgaatggcac
acggtacgagtgagcaggagagggaggagtctgaagctgtctgtggatgacttggccact
gttgaaggagagattccaggtgaccacacgcagctggagtttcacaacattgagactggg
attgttacagagaaacgctacctgctcatcacgccctccaacttcatcgggcacctccag
agcctgacgttcaacggcaagccctacatcgacctctgcgtaaacggagacatcgactac
tgcgaagtcaacgccgtgatcgggttcaagaacatcatcgcagatccggtgaccttcagg
tcctgctcaagctatctgtctctgagcacgctgcaggcgtactactccatgcacctgttc
ttccagttcaagaccacctcctcagacggactcatcctgttcaacagtggagacggaaat
gacttcatcgctgtagagctggttaagggcttcctgcattacatctcagacttgggaaac
ggtgcttatctcatcaaaggaaactcaaacaagcctcttaatgacaaccaatggcacaat
gtcgtcatctccagagacaccaataacctgcacactgtcaaaatcgacaccaaaatcacc
acccagaccaccatgggggccagaaatcttgacttaaaaggcgatctctacattggcggc
gttcctgaggaggtatacaaagagttgcccaagttagttcacgcaaaagaaggatttcaa
ggctgtctggcatccgtggatctgaacggccgtttgccagacctggtgaccgaagcgctg
gcctgcattggacagatcgacagaggatgtgaagggcccagcactacctgtcaggaggat
tcgtgtgctaatcagggggtctgcattcagcagtgggagggcttcacctgcgactgcagc
atgaccacgtacggaggacctctgtgtaacgatgcaggcaccacatatatatttgggaga
gacggtggtctgatcacgtacacatggccaccgaacgaccgtccgagcacacgagctgat
cggctggcgatgggcttcagcactcatctgaaggaagctctgctggtgcgagttaacagc
tcctctgggttaggtgactatctcaaactgcacattgtgaatggctacattgtggctata
ttcaatgtgggcacagatgacatcaacattgaggagaaagcaaagtttgtaaatgatgga
aagtaccatatagtgaagttcacaaggagtggtggcaacgcaacgctgcaggtggacgat
ctgcctgttatcgaacgctaccccacaggaaacattgatagtgaacggctggcgatcgct
agacagcgaattccatatcgactcggtcgagtagttgacgattggctactcgacaaaggc
cgtcagctcacaatcttcaacagccagatgaccatccagatcggtggctgggaaaaagac
cacagccgtgccttccagggccaaatgtctggtttctattacaacggcttgaaggttttt
aacatggccgtggaaggagaccccaacatccgcatcgaaggcagcgtgaggctggttggg
gaggtgcagtcgtcctctatatcaccacagtccagcgctacggtttctcgctcggaaacc
tctacctcagtcgtggagatcactaccacaagcacctccaaccagaagatcaaacccagc
acaagtgaaccccagcagactaccgatgacttgttggtggcgtctgccgagtgccccagc
gacgatgaggacatagacccgtgcgagccgagctcaggtgggttagctaaccccacaggc
cccggggtcaagagctatcctgaccagtcggaggttttccgtgagtccagcagtactaca
ggcatggtggtcggcatcgtcgttgctgccgcgctttgcatcctcattcttctttacgcc
atgtacaaatacctcaaccgcgatgaaggatcgtaccaagtggatgagagccgcaactac
atttgcaattcagcccagtcaaatggaacggttgtaaaagagaaagcgatggacggcacc
agtagtgtcagcaagagcaagaaaaacaaaaacaaggagtattatgtgtaa
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