Puntigrus tetrazona (Sumatra barb): 122356439
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Entry
122356439 CDS
T08985
Name
(RefSeq) LOW QUALITY PROTEIN: toll-like receptor 4
KO
K10160
toll-like receptor 4
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04145
Phagosome
ptet04217
Necroptosis
ptet04620
Toll-like receptor signaling pathway
ptet04621
NOD-like receptor signaling pathway
ptet05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122356439
09143 Cell growth and death
04217 Necroptosis
122356439
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
122356439
04621 NOD-like receptor signaling pathway
122356439
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122356439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122356439
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ptet04054
]
122356439
04090 CD molecules [BR:
ptet04090
]
122356439
00536 Glycosaminoglycan binding proteins [BR:
ptet00536
]
122356439
Membrane trafficking [BR:
ptet04131
]
Endocytosis
Phagocytosis
Toll-like receptors
122356439
Pattern recognition receptors [BR:
ptet04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
122356439
CD molecules [BR:
ptet04090
]
Proteins
122356439
Glycosaminoglycan binding proteins [BR:
ptet00536
]
Hyaluronan
Cell surface receptors
122356439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_14
TIR_2
LRR_5
LRR_1
LRR_9
DHU1_N
LRR_Zer-1
ThsB_TIR
LRR_R13L1-DRL21
DUF4327
Motif
Other DBs
NCBI-GeneID:
122356439
NCBI-ProteinID:
XP_043111086
LinkDB
All DBs
Position
13:complement(1554230..1557047)
Genome browser
AA seq
817 aa
AA seq
DB search
MNVFTVNAFLIYFSINAGESCTKITENLHYSCMGRNLSYIPSNIPSSIQTLDFSFNVLKC
LHRSVFPVLSFLQVLDLSRCHIKHIENDTFYNVKNLITLILTGNPITNYGPGCLNCLHNL
QRLVLVDVGLSSLQLQINNLTKLQELKVGTNNIQSMSLPSFMSTFKDFSLLDLHANNISI
IKTGRHSCVKEIGRNMTLILSRNPLLYIELGAFKDIYLRELDIRSAFVSPDAQKAGLKAL
YGLNVKRLMFGKYRCDYKILSSDANYLDDLCFINFNEIYYYMKERHDVPVSIFRCMINAT
VVAVKAGIIREITNVPFHEIKELYLISNQLDTVPGKQLAHLHTLEKLVFTNNVATQIPDF
VDMPRLQYVDLSSNQITLTSCCSFFSGTPQLRYLNLSLNPQIGLSIGPFDGLDSLEILDF
HHTRVVGMGYLSLFSNLKYLRYLDISFSSITFINIYCFYGLRNLNVLKIAGSNFQGDVAR
YLFNNLTFLEHLDMSFCRMVELHPDSFKNLQRLRLLNLRGNNLMTVDFLALPNLKQLTSL
YVDKNSITSIPLHVLHKLPTNLSDFDLSSNPIDCSCSQTDFISWIIQNQKVLKKPEYIFC
KTFPPTSDFRATDFDIDSCVHKKRLAIVLSVCFITVVVLLSFLVYRFQFYLHYCCILLRG
YRSPGQQECSYDAFVIFSSYDEVWVMNELMENXENGIPPIQLCLHMRDFQAGKSIASNII
DEGIMGSRKIIVVVSQHFIDSAWCRFEFELAQSRFMMERSANIIIIILEDVEERRTKKVF
GLHKHLKKNTYLKWSRDPLRNMRFWIRLRKAIIATNQ
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtctttactgtaaatgctttcctaatatatttttccataaatgctggagaatca
tgcacaaaaattactgagaatctgcactactcatgcatgggaagaaaccttagttacata
ccatccaatattccttcttccattcaaactctggatttcagttttaatgttttgaaatgc
ttacataggagtgttttcccagttttgtctttcctccaagttcttgatctttcaaggtgc
cacatcaagcacattgaaaatgatactttctacaatgtgaagaatttgataactctgatt
ctcactggaaaccccattacaaattacggacctggatgcttgaattgtttacataatcta
caaagactagttcttgtggatgttggtctctcgtcattacagcttcagataaataaccta
accaaactgcaggagcttaaagtcgggacaaataacatccagtccatgtctctcccttca
ttcatgagcaccttcaaagacttcagtctacttgatctacatgccaataatatatccatc
atcaaaaccggacgacacagttgtgttaaggagatcggcagaaacatgactttgattctc
tctaggaatccgttattatacattgaattaggagctttcaaagacatttatctcagagaa
ctggacatccgatctgcctttgtttcgcctgatgctcagaaagctggactaaaagctcta
tatgggcttaatgtcaaacggctaatgtttggaaaatacaggtgtgattacaagattttg
tcatcagatgcaaactatttagatgatctttgctttattaattttaatgagatatattat
tacatgaaagaaaggcatgatgtgccagttagtatatttcgctgcatgattaatgccaca
gttgtagctgtgaaggctggtataattcgtgaaataacaaatgtgccatttcatgaaatc
aaggagctttatttgatttccaatcaattagatactgtgccaggcaaacaactcgcacat
cttcatactttagaaaaacttgtatttacaaacaacgttgcaacccaaattccagacttc
gtagacatgcctaggcttcagtacgtagatctgagttcaaaccaaattacattaacgtca
tgctgctcatttttttctggcactcctcaattgaggtatttaaatttgagtctaaatcca
caaattggtctttctataggaccatttgatggacttgattcccttgagatactagatttc
catcatacaagggttgtaggtatgggatacctttcacttttttctaatttaaagtacttg
agatatctggacatttctttttcaagtattacctttattaacatatattgcttttatggg
ctaagaaatcttaatgttcttaagatcgccggcagtaattttcagggagatgtagcaaga
tatttgtttaataatctgacttttctagagcatcttgacatgtctttttgtcgaatggta
gagttacatccagactcattcaaaaatcttcaaaggcttagacttttaaatttgagagga
aacaatttaatgactgtagattttctagccctcccaaacctgaaacaattaacatcactt
tatgtcgataaaaacagcattactagcatcccacttcatgttctccacaaattgcctaca
aatctttcagattttgatttatcctcaaaccccatcgattgctcttgctcccagacagat
tttatttcctggattatccaaaaccagaaagttttgaagaaacctgaatatattttctgt
aaaacctttccaccaacctcagattttagagcaacagactttgacattgacagctgtgtg
cataagaagagacttgcaatagttttatcagtatgttttattacagtagtagtcctttta
tcattcttggtttataggttccagttttatcttcactattgctgtattctactgagaggc
tacagatcacctggtcaacaagaatgttcctatgacgcatttgtgattttctccagctat
gatgaagtctgggtcatgaatgaactgatggagaatnctgagaacggtataccacctatt
cagctttgccttcatatgcgggactttcaagcagggaagtccatcgcctccaacattatc
gatgaaggaataatgggcagtcgtaaaatcattgtggtggtgtctcaacacttcattgat
agtgcctggtgtcgctttgagtttgaactagctcagtctcgctttatgatggaacgcagt
gccaacatcatcatcatcattctggaagatgtggaagagaggaggactaagaaagtgttt
ggacttcataagcatctgaaaaagaacacgtacctaaagtggagcagagaccctttgaga
aacatgaggttctggatacgcctcaggaaagctatcattgccacaaaccaataa
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