Puntigrus tetrazona (Sumatra barb): 122356606
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Entry
122356606 CDS
T08985
Symbol
btaf1
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptet03021
]
122356606 (btaf1)
Transcription machinery [BR:
ptet03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
122356606 (btaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_EF3_N
TPR_Trm732_C
Vac14_Fab1_bd
HEAT_EZ
HEAT_2
ARM_ECM29
Arm
Motif
Other DBs
NCBI-GeneID:
122356606
NCBI-ProteinID:
XP_043111445
LinkDB
All DBs
Position
13:complement(16519536..16538481)
Genome browser
AA seq
1862 aa
AA seq
DB search
MAVSRLERLFILLDTGTTPVTRKAAAQQLGDVVKLHPHELNNLLSKVLTYLRSPNWDTRI
AAGQAVEAIVRNIPEWNPAPKPKDEVCAEDMSPEDISSDRLSFYRFDISRLLKHGASLLG
SAGAEFELQDDKSGETDPKERLARQRKQLQKKLGLDMGAAIGMDTEELFNDEDLEDSCAS
STNRSQPGKSLGCHFSRNHLPAAELIDSEFRPGMSNRQKNKAKRMAKLVAKQRSRDVDPN
EKSNDSFEGEPEEKRRKTTNVIIEQPATDSKVLIDNVPDNSSLFEETQEWPLESFCDELC
NDLFNPSWEIRHGAGTGLREVLKCHGTGGGKTVGSTAEQMERQHQEWLEDLVIRLLCVFA
LDRFGDFVSDEVVAPVRETCAQTLGVALRHMANSGVAMTVDILLKLLTEDQWEVRHGGLL
GIKYALAVRQDLIAELLPRVLPAITEGLRDLDDDVRAVAAAALIPVVDGLVQLLPAKVPF
IVGTLWNALLELDDLTASTNSIMTLLSSLLTYPQVRQCSTHQSLTVLVPRVWPFLRHTIA
SVRRAALDTLFTLLSKADQSCAAWLNPIMQDMLRHIFQSCILESNQEILELIQKVWGELL
RQAPQQYVVAASCPWMGAWLCLMMQASHIPIDPNMLLEVKARLKEKATGKTRQGSVPVKE
TVQEYIGGAETVTEDLATRDYVVTRARLMAAKLLGALCSCICDPRLNSSSQELRPAESLA
QLLLFHLNSKSALQRIAVSMVICEWAGLQKECELLSSVVQPRLLVILSEQLYYDEIAIPF
TRMQNECKQLIALLADAHIDVTERINSTVFTIDQANELVTNIFSECTSSLNLKSRQFQLL
DSKRVQARSTVCETSAEWQQLQLRVHTFTACAVVGLAMLPDKLNPVVRPLMEAARREENT
LVQGYAASNIARLLQLCAARSPCPNAKIVKNLCSSVCVDPMLTPSAACPVPPASTPAMQE
SSKASVADKDAMHHMVNKTKGIITLYRHQKAAFAITSKRGPTPKAPKTTNNDLPLGGSIT
TETDESKKPCLIQRRGAEFCLMTVARHFSKELTKTLPYLWESMTGPLRNALDAQGFDSSQ
LLKQGDPVAQELVNSLQVLEVTAGAMSQELIPLLMEQLPLLCTCLQHPYTAVRHMAARCV
GVLSKIATMETMNVFLEHVLPWLGAIDDNTKQEGAIEALACVMEQLDVDIVPYIVLLVVP
VLGRMSDPCDSVRFMATQCFATLIRLLPLEAGIPDPPSMSEDLIRQKARERHFLEQLLDG
RKLENYKIPVPIKAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHF
LRAQEYTRSKAPDCGPLPSIVVCPPTLTGHWVDEVGKFCSKEYLNPLHYTGPPTERAWLQ
HQVKKHNLVVASYDVVRNDIDFFRDIKFNYCILDEGHVIKNGKTKLSKAIKQLTANYRII
LSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQEAGVLAME
ALHRQVLPFLLRRMKDDVLQDLPPKIIQDYYCNLSPLQVQLYEDFAKSRAKVNVDDVIST
ASMQEEEEKPKLKATGHVFQALQYLRKLCNHPALVLTPQHPEYKHITEQLSSQHSSLRDI
QHAPKLSALKQLLLDCGLGSAGAADGGTEAVVAQHRVLIFCQLKSMLDIVEQDLLKAQLP
SVTYLRLDGSVQAGLRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNP
MRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMTIANTVISQENASMQSMG
TEQLLNLFTLDKDEKAEKSETTASSSSGKASMKSVLDGLGDLWDQQQYENEYDLDSFMHS
LK
NT seq
5589 nt
NT seq
+upstream
nt +downstream
nt
atggctgtttcaaggttggaacggctgtttatcttactggatacaggtactactcctgtt
acccgtaaagcagctgctcagcagttgggagatgttgttaagcttcacccacacgagctt
aataacctgctatcaaaggttttaacatacttgaggagtccaaattgggatacacggata
gccgcgggacaagctgtcgaagccatagtgaggaatattccagaatggaacccagctcca
aagccaaaagacgaggtgtgtgcagaagatatgtctccagaggacatctcctcagacagg
ctgagtttctacaggtttgatatctcccgtctgctcaagcacggggcgtcgctgctgggc
tctgcaggtgcagaatttgagctgcaagatgacaagtcaggtgagactgatcccaaagaa
cgtttagcccggcagaggaagcagctacagaagaagttgggattggatatgggtgctgca
atcggcatggacacagaggagctttttaacgatgaggacttggaggactcttgcgcttcc
agcaccaaccgatcacagcctggtaaaagcctgggctgtcacttctcacgaaaccatttg
ccggctgcagagctcatagattcagagtttcgtccaggcatgagcaatcgacagaagaac
aaagctaagaggatggcaaaacttgtggcaaagcagagatccagagacgtggatcctaat
gagaagagcaatgacagttttgagggagagccagaggagaagcgccggaaaaccacaaat
gtaatcattgagcagccagcaactgacagcaaagtcttaattgataatgttcctgataac
tcaagtttatttgaggagactcaggaatggcccctggaaagcttttgtgatgaactgtgc
aatgacctctttaacccctcctgggagattcgtcacggagccggcacgggactgagggaa
gtgctgaagtgtcatggtactggtggaggaaagactgttggcagcacagcagaacagatg
gagcgacagcaccaggagtggctggaggatttggtcattcggcttttatgcgtctttgct
ctagaccgattcggagactttgtatcagatgaggtggttgcacctgtcagagagacgtgt
gcccagactctgggtgtggccttgcggcacatggcgaacagtggcgttgcgatgactgtg
gacattctgctcaagctactaactgaagaccagtgggaggttcgacacggaggcctgctg
ggcatcaaatacgctcttgctgtcagacaggatttgatcgctgagctgctgccccgggtt
cttccggccattacagaaggcctgcgggatctggatgatgatgttcgtgcagtggcagca
gcagctttgatcccagtggtggatggattggttcagttgctgcctgctaaggttcccttc
attgtgggcacactgtggaatgccctgctggagctggatgatcttacagcttcaactaac
agcatcatgaccctcctgtcctccctgctcacttacccacaggtccgccagtgcagcacg
caccagtctctaacagtgttggttcctcgagtatggccattcctgagacacacaatcgct
tctgtccgtcgggctgccctagacaccctctttacattactttccaaagctgaccagagt
tgtgcagcgtggctaaatcccatcatgcaggacatgttgagacacatctttcagtcctgc
atcctggagagcaaccaagagatcctagagttgatacagaaggtgtggggggagttgttg
cgacaggcacctcagcagtatgtggtggcggcaagctgtccttggatgggcgcttggctc
tgtttgatgatgcaagcgtcacacatcccaatcgaccccaacatgctactggaagtaaaa
gcacgcttaaaggagaaggctactggaaagaccagacagggatctgttccagtcaaggaa
acagtccaggagtacattggtggagcggagacggttactgaagaccttgccactcgagac
tatgtggtgacacgtgcgcgtctaatggctgcaaagctgttgggggcgctgtgcagttgt
atatgtgatccacggttgaatagctcttctcaggaactccggcctgccgagtctctagca
caacttttattgttccatctcaattccaaatcagccctgcagcggattgcggtttccatg
gtgatctgtgagtgggcaggccttcagaaggaatgtgagctgctgtccagtgtggttcag
ccccgattgctggtcattctctcagaacaactctactatgacgagattgccattcctttt
actcgcatgcagaatgaatgtaaacagctcatagcactgctggctgatgcccacattgat
gtgacagaacgaatcaactccactgtgttcaccatcgatcaggctaatgagctggtcacc
aacatattctcagaatgcacctcttcgctgaatctcaagtcacgtcagttccagctgctg
gacagcaagagggtgcaggctcgttccactgtgtgcgagaccagcgccgagtggcagcag
ctgcagcttagagttcataccttcactgcctgtgctgtggttgggcttgccatgttgcca
gataaactcaatcccgttgtaaggcccctgatggaggcggcccgccgcgaagagaacacg
ctcgtccagggttatgcagcctccaacattgcccgattgctccagctgtgcgctgccaga
tctccctgcccgaatgccaagatcgtgaagaatctctgcagctctgtgtgtgtagatcca
atgctcacccctagtgctgcatgtcctgtcccaccagccagcactccagcaatgcaggag
agcagtaaagcatctgtagcagacaaagatgcaatgcatcacatggtgaacaagacaaag
ggcatcatcaccctttaccggcatcagaaagcagcttttgctatcaccagtaagagagga
cccacacccaaagcccccaaaactaccaacaatgacctacccctcggaggcagcattact
acagaaacagatgagagcaagaagccatgtcttatccagaggagaggggcagaattctgc
ttgatgacagttgccaggcatttcagtaaggagttgaccaaaacattgccatatctgtgg
gagtccatgaccggtccgctgaggaatgcgctggatgctcagggatttgattccagccag
ttgctgaagcaaggagacccggttgctcaggaacttgtgaactctctgcaggtgctggag
gtcacagcaggagccatgtcccaagagctcatccctttattgatggagcagttgcctctc
ctttgcacctgtctgcaacatccatacacagccgtacgtcacatggccgctcgctgtgtg
ggtgtgctcagcaagatcgctactatggaaaccatgaatgtgtttttggaacatgtgctt
ccctggttgggtgctattgatgacaacaccaagcaggagggagccattgaagccctggcc
tgtgtgatggagcagctcgatgtggatattgtgccctatatcgtgctgttggtggtcccg
gtgttgggccgtatgagtgacccctgtgacagcgtgcgattcatggccactcagtgcttt
gcgaccctgattcgactgcttccccttgaggctggaatcccagacccgccatctatgtct
gaagatctaattcgacagaaagccagagaacgacacttcctcgagcagctgcttgatgga
cggaaactggaaaattataagattcctgtgcccattaaagcagagctcaggaaataccag
caggatggagtgaactggctggcgtttttgaacaagtacaaacttcatgggatcttgtgt
gatgatatgggtctgggaaaaaccctgcagtccatctgtattctggcaggcgatcatttc
ctcagggctcaggagtacaccaggtcaaaggctcctgactgtggccctttgccatccata
gttgtgtgtccacccaccctgacgggacactgggtggatgaggttgggaagttctgctct
aaagagtatctcaatcctcttcactatactggccctcctacagaaagagcatggttgcag
caccaggtgaagaaacacaatctcgttgttgcctcgtatgatgtcgttagaaatgacatt
gactttttcagggatattaaatttaattactgtatccttgatgagggtcacgtcataaag
aatggaaagaccaaactttctaaagcgatcaagcagttaactgccaactacagaataatt
ctctcaggaacgcccattcagaacaatgttctggagttgtggtctctatttgacttcctg
atgccaggctttcttggtactgagcgtcagtttgctgcccgctacgggaagcccatcctt
gccagtcgagatgctaaaagttcctcacgcgaacaggaagcaggtgtgcttgcaatggaa
gctctgcatagacaggttctgcccttcttactgaggagaatgaaggatgatgtgcttcaa
gatctgccacccaagatcatacaagattactactgcaacctcagtcctctacaggttcaa
ctgtatgaggactttgcaaaatctcgcgccaaggtgaacgtggatgacgttatttccact
gcttctatgcaagaggaggaagagaaacccaaattaaaggccaccggacacgtcttccag
gctctgcagtatctgaggaagctgtgtaatcacccagcactggtgctgacccctcaacac
ccagagtacaaacacatcacagaacagctgagcagccagcactccagcctcagagacatt
cagcatgccccgaaactctcagccctcaaacagctgctgttggactgtggacttggttct
gctggagcagctgatggtggcacagaggctgtagtagcccagcatcgtgttctgatcttc
tgtcagctgaagagcatgctggacatcgtggagcaggacctgctcaaagcacagctgccc
tcagtcacctacctcaggctggatggaagtgttcaggccggcctcagacactctatagtc
tctaggttcaataacgacccgtccatagatgttctgctgctcactacccatgtgggtggg
ctgggtttgaatctgactggagctgatactgtagtgtttgtggagcatgactggaacccc
atgagagacttgcaggccatggatcgagctcacagaataggacagaaacgtgtagtgaat
gtgtatcgtctcatcacacggggcactctggaggaaaagatcatgggtctgcagaaattt
aagatgaccattgccaatacagtcatcagccaagagaacgccagcatgcagagcatgggc
acagaacagctgctcaacctcttcacgctggacaaggatgaaaaagcagagaagagcgag
acgacggcgtcttcgtcctctggtaaagctagtatgaagtccgttctggatgggctggga
gacctgtgggaccagcagcagtatgaaaacgaatacgacctggacagcttcatgcactcg
ctcaaatga
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