Puntigrus tetrazona (Sumatra barb): 122356646
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Entry
122356646 CDS
T08985
Symbol
alms1
Name
(RefSeq) uncharacterized protein alms1 isoform X1
KO
K16741
alstrom syndrome protein 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptet03036
]
122356646 (alms1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ptet03037
]
122356646 (alms1)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
122356646 (alms1)
Cilium and associated proteins [BR:
ptet03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
122356646 (alms1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ALMS_motif
Motif
Other DBs
NCBI-GeneID:
122356646
NCBI-ProteinID:
XP_043111542
LinkDB
All DBs
Position
13:complement(5085837..5097829)
Genome browser
AA seq
2166 aa
AA seq
DB search
MRVNVCVSNDMDSEECAADVNNPPADIPCQQHGQNMHDSEASRPCTDPDNDERPFSNTQD
SSVQPLIDRSETLQLEFQNSQLSPALTLHPCLDKSHLLSDSTFYQHSDAEFVPLRGFPDF
SVMTERCPRTSNVAVTDDPHLQNTVLDQAVLSQHPLEAPTVLSEGENSCCSLSQHSLSPG
DHCKEREDQRSISYGAEDKIIRHMEGEEQTTAQQLSDGMSTRHLVVSREEDVSDNSTISS
TSEFATLHQNIDKIQLDTFVNLQKGREQPQGDSLSLSSSFRKAADVSNITFRDSRILSHQ
TNDHLHDHLSAGQRGSISAPASRHHSGNKSSLSGLCATPAGEGLMRVQDLQKVLCSSGHL
TAADGSFLSSQPVSQSTPALPLMRPPPSLTKLSLIHSKQEAAASAATSSQNSQCKSGLIP
SLDLSDQRSSPIHSQTTATVPLEPSETVQTMSHAHPISNKQVPRPILNASHPDTQLFFSS
ARDQVPLLALGRVHSLPSLNYLQKVDAWKANQSSSRSFYDNLAQQGFDGVSPKKKAKDVV
SEELNHMLSRDTHLTFGTNFSSQMTQPLSSSHSGSGSPRRVDVVGMGACRGQATESPVNR
SHSHSSLSSVVTSIQRDTVPHNQQVPVAQSINIIPATSTLDYQSSFSSGGRCEGKNISAP
QIDKSSVKMSHMPSLGHFSDVSSSFNMSSTLSSSQGSCRDEQSMRASVGANSSVVSLEVD
NYAPYWTSRPASPPHTRELNIEDRIPLYLLNLGIDQSPSTILNPFTRRGPIREPEFSPTD
LCTIKGSIGTPTKSTQPSEVDSLQKETFSSSSQLSADSSASVTQRLSKHVQGQPASDRTV
RKMFSQADTQPILHSTLHPSSSHQSEGSSGLPSSESVPPPGPREVVKEEDDSFVGSGTLH
EIRRLLGRAESLVSGRSSLTSSPCSHRLSESDTSLVSLGRKIKSYHDDTSLSAGGNLSLM
LTRSSSDSVLKGSLSSSQMPQQIDHTTIEPTTLSFSREESLKSRDLCVTPRRAEPEGCSA
ADPDKAKPPTVTSALQIVVPSIAETQDQTEDALIGFSENNSSQVSVEVESMSDSSSESSL
AARVAKLLQSESPVSMVTSRPSTSDPEDSRAREWILMKVSGRQCESLELNAEDRERIEDI
KRELLLNTKYTKWSSDSEGSAQSSVGPESQLTKGGGGLRNMENHYSDQPLIVNPKPLDTV
PLYIPIQQDLEAKVRQIALREALSSQTFSSVTISTTRRTPSPQPPSHCPISATEELNSVS
PDHVTSESISQMRLHQTVIPNESGIEKETLREEQQRDENNREVMPDDNKENIVTKHSLRI
QRIPHMDYHVTGSNQILFSAASDSDFDKKPHLSQMHFTLSPKSKKQSNPNCLSRLSSEHS
SKDVQSPVVSGMNDQHLHSFQQISKSDPARSYEHRESVQGQNAGSVSAHLQARFPQTFAP
SQRLPGTSRSLSAQAAVPSLLPYKPHGSSELFYVPQADPELSPGRSDTTVESSHPGSDDA
VPPNFNTDILGSRELEDNIITPKHKEGIYSKRANMKRVSSVSENGLLESVATFADQNDNT
APEAHVLEKNIDTVGIDDEYRDEEENFVPLPMEADYSTDDVHLHTNTIQEPKLPLEPHYL
PSQPIRKSYRGDKKKEDRTPHDVSIEISSSLDQLWRRFSEKWSMEETRPTDKGETSLLDR
LERLSRLIHNTTPTDLTIQQSHSRKGGCYRRSDQEDGTTEGEEQREGVQLDMAPQQAWTE
HEASQDRVHRCPAERDESASVETSSSLSTVDTERLLQAFGRHRVTSKALKSSDSMLKPGR
RKPRTKHVAVSVATDDMSTDDSTVSADSLSSSSALSPHSQRGLSQNLNSKRSKVKLVSKG
VQAGDLEIVINGTRRHTRDVGTIFPSPGAFKNVRSSITFGRSIQSGFPIPTASTSKPTQT
LTSLKKDTSNKSIRTRYPNGVSWFVAADELKCDGRKENQPQTESTPCPSQVWFQPYTRTR
PWREMTREPLRERQNQQEQERPTEALTATETDVSDKPSDLVRLSLQEALELHRPEFVSRS
RERMKRLGFLVEERRLQAVFNREREELFNCPAPSRPYRPAAPVPRKRVVPRREMIQRSKD
WVGRKSHSQRIVRTDRLKRKYAQLPEVQRRREEERRQAEHRSYRLNAQLFNKKVTNRVLG
RRAPWQ
NT seq
6501 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttaacgtctgcgtcagtaacgacatggattcagaggagtgtgctgcggacgta
aacaatccccctgcagatattccctgccagcagcatggacaaaatatgcatgattcagag
gctagcagaccatgcacagatcctgataatgatgaaagaccatttagtaacactcaggat
tcaagtgtgcagccactcatagacagatctgagactttacaactggagtttcagaatagc
cagttgtcacctgcacttaccctgcatccctgtctggacaaatctcaccttctttctgac
tccacattttatcagcattcagatgcagaatttgtccctcttcggggatttcctgacttc
tcagtgatgactgagagatgccccaggacttcaaatgtagctgttactgatgatccccac
ctccaaaatactgttcttgaccaggctgtgctttcccagcatccgttggaggcaccaaca
gtcctctcagagggtgaaaatagctgctgttcactctcccagcacagcctgtcacctgga
gaccattgcaaagagcgtgaagatcaacggagcatttcatatggtgctgaggacaaaatc
atcagacatatggaaggagaggagcagaccactgctcagcagcttagtgatggaatgtct
actcggcacttggtagtgtccagggaagaggatgttagtgacaacagtaccatttcctcc
acctctgaatttgccacacttcaccaaaacatagataaaatccaattagatactttcgtg
aatcttcaaaaaggcagagagcagccccaaggggactctttgtcattatcatcttcattt
cgaaaggctgcagatgtttcaaatataacttttcgtgattcacggatactttcacatcaa
acaaatgatcatcttcatgatcatctgtctgcaggacagagaggctcaatctcagctcct
gcaagcaggcaccatagtgggaacaaaagctctcttagtggactgtgtgccacaccagct
ggtgaaggtttaatgcgcgtacaagatctacagaaagtgctctgtagctctggtcatcta
acagcagcagatggttcattcttgagctctcagcctgtgtctcagtccacacctgcacta
cctctcatgagacccccaccatcattgaccaaactctcactcatacactccaaacaagag
gctgctgcttctgcggctacatcctcccaaaacagccaatgcaaaagtggcttaattcca
tcgttggacttaagcgatcaacgttcctctcccattcactctcaaacaacagctacagtt
cctttagaaccttcagagactgtgcaaacaatgtcacatgcccatcccatttcaaacaaa
caagttcctcgtcctattttaaatgcatctcaccccgatactcaactttttttctctagt
gctcgagatcaggttcctcttttggcccttgggagagtacattctcttcccagtctgaac
tacttacaaaaagtggatgcctggaaagccaatcaaagttctagcaggtcgttttatgat
aatttggcacaacaagggtttgatggtgtttctcccaagaaaaaagcaaaggatgttgtg
tctgaagaacttaaccacatgctctctcgagatacacatctgacatttggtactaatttc
agctcccagatgactcagccactttcctcttctcattctggaagtggctcacctcgtcgg
gtggatgtagtcgggatgggtgcgtgcagaggacaagcaactgagtcgcctgtcaatcgc
tcacactctcactcctcactgagctctgtggtgacatctattcagagagacaccgttcca
cacaatcagcaagttccagtggcacaatctattaacatcattccagctaccagtacattg
gactatcagtcgtccttcagttcaggtggaaggtgtgaaggaaagaatatctcagctcct
caaattgataaaagctcagtgaagatgtctcatatgcccagtttggggcacttcagtgat
gtgtcatcaagctttaacatgagcagcactctttcaagctctcaaggcagttgccgtgat
gaacagagtatgcgagcatcagtgggagccaactcttcggtagtgagtcttgaagtagat
aattatgcaccgtactggacctccagacctgcatcccctcctcacactagagaactcaac
attgaggacaggatccctttgtatctcttaaatttgggtatcgatcagtcaccttcaaca
atcttaaatccatttactcgtcgaggaccgatcagagagcctgaattctctcctactgac
ttatgtaccatcaaaggctccataggaacaccaactaaaagcacacagccatctgaagtt
gacagtcttcagaaggagacattctccagttctagtcagctctcagctgactccagtgct
tctgtcacacaacgattgtcaaagcatgtgcaaggccaaccagccagtgacagaactgta
aggaagatgttcagccaggcggatactcaaccaattcttcattcaactttacatccttca
tcaagccatcaaagtgaaggaagctctggccttcctagctcagaatccgtgcctcctcca
ggtcccagagaggtggtgaaggaggaggatgactcttttgtaggctctggaacactgcat
gaaatcagacgtctgctgggccgggcagaaagcttggtttctggtagatcttctctgaca
tcttctccttgctcacaccgcctctcagaaagtgacacatcccttgtttcgttaggacgg
aaaattaaaagttatcatgatgacacatctctgtcagctggtgggaatctttctttgatg
ctgacacgctcttcatcagattcggttttgaaaggaagcttgtcatcctcccaaatgcct
caacagattgaccacacaactatagagcctaccactctctcttttagcagagaggaaagt
ttgaagtcacgtgacctctgtgtgaccccaaggcgggctgaacctgaaggctgcagtgct
gcagacccagacaaggcaaagccacctacagtcacatctgccctgcagatagttgttcct
tcgatagcagaaacccaggaccagactgaggatgctctgattggcttttctgagaataat
tcgtctcaagtctcagttgaggttgagagtatgagtgacagtagcagcgagagctcattg
gctgccagagttgccaagctcctgcagagtgagtcacccgtttcaatggttacaagccgt
ccaagcaccagtgatccagaagatagccgagcacgagaatggatcctgatgaaggtttct
ggacgccagtgtgaaagcttagaactaaatgctgaggacagagagagaattgaagacatc
aaaagagagcttctactcaacaccaaatacaccaagtggagctcagattctgagggcagt
gctcagtcaagtgttggtcctgaatctcagctaacaaagggtggaggtggactacgtaac
atggagaatcattattcagatcagccgctgatagtcaatccaaaaccgttggacacagtt
cctctttacattcctatccagcaggatctagaggccaaagttcgccagattgcccttaga
gaggcgctcagttcacagactttttcttctgttactatatctaccactcgccgcactcca
tctccacagccaccatcacattgccctattagtgctactgaggaattgaacagtgttagt
cctgaccatgtgacttcagagagcattagccaaatgagacttcatcaaactgttataccc
aatgaatctggaatagaaaaagagacgctgagagaagaacaacagagagatgagaataac
agagaagtaatgccggatgacaacaaagagaacattgttacaaaacattccctaagaatc
caaagaatacctcatatggactatcatgtcactggcagtaaccagatattattcagtgct
gcatcagattcagactttgacaagaagccccatctctctcaaatgcacttcaccttatcg
cccaaatcgaaaaagcagtccaatccaaactgcttaagcagactatccagtgaacactcc
agtaaagatgtccagtctccagtggtgtcaggcatgaatgatcaacatctgcattccttt
cagcaaatttcaaaatcagatcctgccagatcatatgaacacagagagtcagttcaaggc
cagaatgctggaagtgtcagtgcacacttacaggccagattcccacaaacttttgctccc
tctcagaggcttcctgggacatccagatctctctctgcccaagcagctgtcccttccctg
ttgccatacaaacctcatggaagctctgagctgttctacgtcccgcaggctgatccagag
ctttctcctggtcgctctgacaccactgtagaaagctcgcacccaggttctgacgatgct
gtccctccaaactttaatacagacattttaggctctagagagctagaagacaacataatt
acaccaaaacacaaggaaggcatctacagtaagagggccaatatgaagagagtttccagt
gtgtctgaaaatggtctcctagaatcagtagccacatttgctgaccagaatgacaatact
gctcctgaagctcatgttcttgagaagaacattgatactgttggcatagatgatgagtat
agagatgaagaagaaaattttgtccccttgcccatggaggcagactacagtacagatgac
gtgcatctgcacactaacactattcaagagcccaaattaccacttgaaccacattattta
ccttctcagccaatcagaaagtcctacaggggtgacaagaaaaaggaggacagaacacct
catgatgttagcatagagattagcagctctctggaccagctgtggcggcgcttcagtgaa
aaatggagcatggaagagacaagaccaactgataaaggagaaacgtctctgcttgataga
ctggagcgtctgtctcgtctcattcacaacactactccaacagacctaactatacaacag
tcacacagcaggaaaggagggtgttacaggaggagtgatcaagaggatgggaccacagag
ggagaagagcaaagagaaggagttcagttagacatggctccacaacaagcttggactgag
catgaggcgagtcaggacagagtgcatcgctgtcctgctgagagagatgagtctgcgagt
gtggagacgagcagtagcctgtccaccgttgacacagagcggctgctgcaagcttttgga
cgtcaccgggtcaccagtaaggcactgaaaagcagtgacagcatgcttaaacctggcaga
aggaaaccccgtactaaacatgttgccgtctctgttgctaccgatgatatgagcactgat
gactccacagtctctgctgattcattgtcatcttcaagcgctttatcccctcattctcaa
agaggtctttcccaaaacctcaattccaaaaggtcaaaggtcaaactggtcagcaaaggt
gtgcaggcaggtgatttggaaattgttataaatggcacccgcagacacactcgggacgta
ggcaccatctttccctcaccaggtgctttcaaaaatgtccgttcatcgatcacatttggc
agaagcatacagagtggctttcccatccccactgcttccacatctaaacccacccaaacc
ctgacttctctgaagaaagacaccagtaacaagagcatccgaactcgctacccgaacggt
gtctcatggttcgtcgcagctgatgagcttaagtgtgatggtcgcaaggaaaaccagcca
cagaccgaatcaacaccttgcccaagccaagtctggtttcagccttacactagaaccaga
ccctggagagaaatgactagagaaccactgagagagcgacagaaccaacaagaacaagag
agaccaacagaggcattaacagctacagagacggatgtcagtgacaaaccctcagatctt
gttcgactttcactgcaggaagctctggagctccatcggccagagtttgtatctcgctca
agggagcggatgaagcgtctgggctttctggtggaggagaggaggttacaggcagtcttc
aacagagagagagaagagctcttcaactgccccgcaccatcacgtccatatagaccagca
gctccagtaccacgtaaacgagttgttccaagaagagagatgatccaaagatccaaagat
tgggtagggaggaaatcacacagtcagagaatagtcaggacagacagactcaagaggaaa
tatgctcaacttcctgaggtccagaggagaagggaagaggaaaggagacaggcagagcac
cgctcgtaccgcctaaacgctcaactctttaacaagaaagtcaccaatcgagttttagga
aggagagcaccctggcagtga
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