Puntigrus tetrazona (Sumatra barb): 122356695
Help
Entry
122356695 CDS
T08985
Symbol
hps1
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122356695 (hps1)
Membrane trafficking [BR:
ptet04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
122356695 (hps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_3
Fuz_longin_2
COMMD1_N
Motif
Other DBs
NCBI-GeneID:
122356695
NCBI-ProteinID:
XP_043111621
LinkDB
All DBs
Position
13:15864839..15871816
Genome browser
AA seq
668 aa
AA seq
DB search
MKCLLVANESAEVLFYWTDTEFEQKTQEQYGVSQEEGERLPAFEDSINTLFAPIIISCST
MVDRLGDNYTSFSTENNHIYVLHQFDECLYIAVNGDGDETEDDLKRKIYVIKKLTEIMFG
MVTCSGALLRKELRPQDTEQRNRLWMKLRSLLETYSHLRVNDQSFLVEAVERLIHPTLCE
QCIEFLERRLVQQINSNMDRMGEEVLHAFILVNTKLLAFYSSRNASSLHTSDLLALIILV
QDLYPSKIDLDDTSEELESSSVPDVFYTPEPSPPERESVRPRGDSPPVFQFVDPDVQMAE
DSLQTLEAPTPDLSAPFRVFLETKECPMMPHSMYCLPLWPGITLVLLTKIPNSHVAVSFF
YILEAFVKLEKRLCEGHEGAAAMRGQPSVQEQRSRLEKLIKSCASMDVQTSQLQNAWTDF
KNKAFSRSGSGFTRDLLTLCRNMKTQLCGVYRLFFAAECMGSSQRLAPHLQERALSMVQE
KLMDWKDFLLVKSKRNITMVSYLEQYPGLIHFIYVDRLDGQMIAPSLNVTDRTVSELGKG
PLADFIKNKVWSLVAKAQRYLQKGYTTVTLRDGDYFYCYFLWFENETGYKLEVIDIPSSS
DDAAPVGMLTCDYYRKLLRYYSKKHQNEVVKCYELFTVHLGVIPNEYILQHCSQLARKLW
EPTRIPLL
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtcttctggtggccaatgagagtgcagaggttctgttctactggactgacact
gagttcgagcagaagactcaggagcagtatggagtttcccaggaggaaggagaacgactg
cctgcgtttgaagacagcattaacactctcttcgcacccatcatcatctcctgtagcacc
atggtggaccgactcggggacaattacacttccttcagcacagaaaacaatcatatctat
gttctgcatcagtttgatgaatgtctgtacatcgccgtgaatggagacggagatgagacc
gaagacgatttgaagagaaagatctatgtgataaagaaactcacagaaatcatgtttggc
atggtgacgtgcagtggtgccctcttgaggaaagaattgcgccctcaagacacagagcaa
aggaaccgcttgtggatgaagctacgaagcctcttggaaacgtacagccacttaagggtc
aacgatcaaagctttttagtggaggcggtggagaggttgatccacccgaccctttgtgag
cagtgcattgagtttttggagcgtcgtctggtgcagcagatcaacagcaacatggataga
atgggagaggaggtgctacacgctttcatactggtgaacaccaaactgctggccttctac
tccagtcgaaatgccagcagtctgcacacctctgatctcctggctctgatcatcctggtg
caagatctctatcccagcaaaatcgacctagatgacacatctgaggagttagagagcagt
tcagtccctgatgttttctacacacctgagccctctcctcctgaacgggaatcagtgcga
ccaagaggtgacagtcctcctgtcttccagtttgtagatcctgacgttcagatggccgaa
gacagtctgcaaactcttgaagctccaacccctgacctttcagccccattcagggtattc
ctggaaaccaaagagtgtcccatgatgcctcactccatgtattgcctacctctctggcct
ggaataactctagtgctgctcaccaagatacccaacagtcatgtggcagtatcttttttc
tacatcctggaagcttttgtgaagttagagaagaggttgtgtgagggacatgaaggggcc
gcagccatgcggggtcagccctctgtccaggagcagcggagcagactggagaagttaatc
aaaagctgtgccagtatggacgttcagacctcccaactccaaaatgcatggacagacttc
aagaacaaggcgttcagcagatcaggatctggattcacaagagatttgctgaccttgtgt
cgaaacatgaagactcaactgtgtggagtgtataggctgttttttgcagctgagtgcatg
ggcagcagtcagcgattggctcctcatctgcaagaacgagcgctgagcatggtccaagag
aagttaatggactggaaggattttctgctggtgaaaagcaaaagaaatatcacaatggta
tcatatctagaacaataccccggtctcatccactttatctacgtggaccgtttagatggt
cagatgattgcaccctccctaaacgtgacagatcgcactgtctctgagctcggaaagggg
cctctagctgacttcataaagaacaaggtttggagccttgttgcaaaagcacagcggtac
ctgcaaaagggttacaccaccgtgacgctccgggatggcgattacttctactgttacttc
ctgtggtttgaaaatgaaacgggttacaaactggaagtgatagacatacccagctcctca
gatgatgccgcaccagtaggaatgctcacctgtgattattacaggaagctgctgcggtat
tacagcaaaaaacatcaaaatgaggtggtgaagtgttatgaactgttcactgtgcatctg
ggtgtgatccccaatgaatatattcttcagcactgcagtcagctggcccgtaagctgtgg
gagcccacccgtatcccgctcttgtga
DBGET
integrated database retrieval system
