Puntigrus tetrazona (Sumatra barb): 122356730
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Entry
122356730 CDS
T08985
Symbol
pax2a
Name
(RefSeq) paired box protein Pax-2a isoform X1
KO
K15608
paired box protein 2
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptet03000
]
122356730 (pax2a)
04131 Membrane trafficking [BR:
ptet04131
]
122356730 (pax2a)
03036 Chromosome and associated proteins [BR:
ptet03036
]
122356730 (pax2a)
Transcription factors [BR:
ptet03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
122356730 (pax2a)
Membrane trafficking [BR:
ptet04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
122356730 (pax2a)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
122356730 (pax2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
Homeodomain
DUF6115
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
122356730
NCBI-ProteinID:
XP_043111684
LinkDB
All DBs
Position
13:10796082..10828360
Genome browser
AA seq
519 aa
AA seq
DB search
MDIHCKADPFSAMHLSHIGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQ
LRVSHGCVSKILGSYQKDLIRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMF
AWEIRDRLLAEGVCDNDTVPSVSSINRIIRTKVQQPFHPSSDGTGTPLSTAGHTIGDLES
TPYTLTYSCALSVPSTASPPVSSASNDPVGSYSINGILGIPRSNGEKRKRDDVLWSGNHL
DGRKIGYYGSDGSGPNSDSQGSVESLRKHLRADAFTQQQLEALDRVFERPSYPDVFPTSE
HIKPEQANEYSLPALNPGLDEVKPSLSTSVSSDLGSSVSQSYPVVTESHSSSVCVKQEPH
EASLAPFTPSSLAVSGLAELLPLQPTVSVDASTPCYGAYAHHAPSYGQYASQPIIAGRDM
ASTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSDFSGNPYSHPQYTTYNEAWRFSNPALLM
PHHGAPPLPLLPLPMTATSYHGNPIKLQDHGRGLHIVPV
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggatattcactgcaaagcagaccccttctcggcgatgcacctatcccatatagggcac
ggcggtgtgaaccagctaggaggggtgtttgtgaatggcagacccctacctgacgtggtc
aggcaaagaatcgtggagctcgcgcaccaaggagtcagaccttgtgacatctcgagacaa
ctacgggtcagccacggctgtgtcagcaaaattctcggaagctatcaaaaggatcttata
agatactatgaaaccggcagtattaaacctggagttattggagggtccaaaccaaaagtg
gcgacgcccaaagttgtggataaaatcgcagaatacaagcggcagaatcccacaatgttc
gcctgggagatcagagaccgactcctggccgagggcgtttgcgacaacgacacagtaccg
agcgtttcatccataaacaggataattcgaaccaaagttcagcagcctttccatccatcc
tccgacggcacaggaacgcctctctccacagcgggacacactataggtgatcttgagagc
actccatatacgttaacctattcctgtgctctttcagtgcccagcacagcctccccacct
gtgtcaagcgcttccaatgaccccgtggggtcctactctattaatggcatcctaggaatc
cctcgctccaacggcgaaaagagaaaacgcgatgatgttctctggagtggcaaccacttg
gatgggaggaaaataggatattatggttcagatggctctggcccaaacagtgattctcag
ggtagtgtggagagtttacggaagcacctgagggccgatgctttcactcaacagcagctg
gaggctctggatcgggtgtttgagcggccgtcataccccgacgtcttccctacgtcagaa
cacatcaagccagagcaggctaatgaatactcgctaccagcactgaaccctggactggac
gaagtcaagcccagtctgtcaaccagcgtcagctcagatttgggctccagcgtgtcacag
agctacccggtagtgacagagtcacattcatcctccgtgtgcgttaagcaggagccgcat
gaggcttccctggctcctttcaccccttcctcactggcagtctcgggcctagcggaactg
ttgcccctccagcccaccgtgtcagtagatgcctccaccccctgctacggtgcctatgcc
catcatgcccccagctacggccaatatgcaagccagcctattatagcaggtcgagacatg
gcaagcacaaccctaccaggatacccacctcacgttccccccactgggcagggcagctac
cccacctctacacttgctggaatggtccctggaagcgacttttcaggaaatccctactct
cacccacagtacacaacttacaatgaagcttggcggttcagcaaccccgcgttattaatg
ccgcatcacggggctccgcccctcccactgctgccactgcctatgaccgccactagttac
catggcaacccaatcaaactgcaggaccatggccgcggcctccatatcgtaccagtctga
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