Puntigrus tetrazona (Sumatra barb): 122356734
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Entry
122356734 CDS
T08985
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122356734 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptet03021
]
122356734 (polr1b)
Enzymes [BR:
ptet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
122356734 (polr1b)
Transcription machinery [BR:
ptet03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
122356734 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
DUF1186
Motif
Other DBs
NCBI-GeneID:
122356734
NCBI-ProteinID:
XP_043111720
LinkDB
All DBs
Position
13:16292761..16302095
Genome browser
AA seq
1135 aa
AA seq
DB search
MDLNKWCNLKSEPSLKHLTETGFGVPKEKQHLPMQELVKAHIESFDQAITDGLCRIVEAI
PPLEFMFFGDRISLSFVEAIIHRPAVSKGGISRDLRVFPAECRGRRCTYRGRLVADVNWS
LNGVPRGIIKQSLGNVPIMVKSKLCNLDGLSPKELIEHHEEAEEMGGYFIVNGIEKVIRL
LIMPRRNYPIALTRPKFKSRGPGYTQYAISMRCVREEHTAINMNLHYLDNGTVVVNFIYN
KQLFFLPLGFALKALVDFSDYQIYQELIKGYEENSFYKSCVSEMLRMVMDQGCITKSKVL
NYLGERFRVKLSLPEWYTHEQCAHFLLNECLCIHLKSDVEKFYMLSLMTRKLFRFAKQEC
MEENPDSLMFQEVLTPGQLYLMFLKEKMAGWLVSVKLSMEKKIKRLQKMGSLNTDAMTKF
FNMGTDITRAFEYLLATGNLQSKTGLGMLQANGLCVVADKLNFIRYLSHFRCVHRGAAFA
KMRTTSVRKLLPESWGFLCPVHTPDGEPCGLMNHLTAHCEIVAPVHPTTTLPALLCSLGV
TAADGSPSQPFSDCYPVILDGAMIGWVEKEVAPSVTESLRRFKVLGERKIPAWSEVVLVP
QTGKASLYPGLYLFTTPCRMVRPVRNLSLGKQELIGTFEQVYLNVGIFEEELEQGVTTHQ
ELFPHSMLSVVAEFIPFSDHNQSPRNMYQCQMSKQTMGFPLHSYQERTDNKLYRLQTPQS
PLVRPAMYDHYDIDNYPIGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGMVYKTELI
DLSDKFKGDDSIVFGVKPGDPKVMDKLDADGLPFIGSMLKYGDPYYSYINLNTGQSYVVF
FKYQESCVVDNIKVCSNDTGTGRFKRICITTRIPRNPTIGDKFASRHGQKGILSRLWPAE
DMPFTESGMCPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFKFSEESSALE
HFGEMLKAAGYNYYGTERLYSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDK
VTNQPLGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSAAQVCMGCGSLLSPL
LEKPPPYWSNTRHRKTICLLCNKSDSIETVSVPYVFKYFVAELAAMNVKIKLDVK
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggatcttaacaagtggtgcaatttaaagtccgaaccgagtttaaagcatttgacagag
acggggttcggtgtcccgaaggaaaagcagcacctgcccatgcaggagctggtgaaggcg
cacattgaatcgtttgatcaggcaattactgatgggttatgtcggattgtggaggccatt
cctcctttagagttcatgttcttcggagacaggatcagtctgtcgtttgtggaggccatc
attcacaggccagcggtttctaaaggaggtatcagcagagacctgcgggtcttccccgct
gaatgcagaggcaggcgctgcacgtacagagggaggctagtggcagacgtgaattggtct
cttaatggcgttcccagaggaatcatcaaacagtctctgggaaatgtgccgatcatggtc
aaatcgaaactctgcaatcttgatggtctctcgcccaaagaactcatcgagcatcacgaa
gaagccgaggaaatgggcggctatttcatcgttaacggcatagagaaggtgattcgtctt
ttgatcatgccgaggaggaactatcccattgctctgacaagaccaaagtttaagagcagg
ggaccgggctacactcagtacgctatttcaatgcgctgtgtaagagaagaacacacggct
attaatatgaatcttcactacctggacaatggaacggtggtggtcaatttcatttacaac
aaacagctgttctttcttcccttgggctttgcactgaaggctttagtggatttctcagat
taccagatctaccaggagctgattaaaggttatgaggagaactctttctacaaaagctgt
gtctcagaaatgctgcgtatggtcatggaccagggctgcataactaaatccaaggtgctt
aattacctgggcgagcgtttccgggtcaaactcagcctcccagaatggtacacccacgag
cagtgcgctcacttcttgttgaatgaatgcctgtgtattcacctgaagtcagatgtggag
aagttctacatgttgtctctgatgacgcggaagctcttcagatttgccaagcaggagtgt
atggaagaaaaccctgacagtctgatgttccaagaggttctgactccaggccagctctac
ctcatgttcctaaaagagaaaatggcaggttggttggtttcggtcaaactgtccatggag
aagaagattaagagactccagaaaatgggatcactgaatacagatgctatgactaaattc
ttcaacatgggtacagatatcaccagagcttttgagtatctgttagccactggaaacctc
cagtccaagacgggtctgggaatgctgcaggccaacgggctgtgtgtcgtggcagataag
ctgaacttcatccgttacctgtctcatttccgctgcgtgcacagaggagccgccttcgct
aagatgaggaccacgtctgtgaggaagctgctgccggagtcctggggcttcttatgtccg
gttcacactcctgacggagaaccgtgcggcctcatgaaccacctgacagcccactgcgag
attgtggccccggtgcatcctacaacaaccctgcctgccttgctctgctctctgggtgta
actgcagcagatgggagccccagccagccgttttcagactgttatcccgtcatactggac
ggagccatgattggctgggtggaaaaagaagtagcaccgtctgtcactgaatctcttcgt
agatttaaggtgctgggagagagaaaaattcctgcctggtctgaggtggttctggttcct
cagacaggtaaagccagcttgtacccaggcctctatctgttcaccacaccgtgtcgcatg
gtacggcccgtccggaacctcagcctgggaaaacaggagcttattggcacctttgaacag
gtgtatctaaacgtgggcatcttcgaggaagagctggagcagggagtgacaacgcatcaa
gagctgtttcctcacagcatgctgagtgtggtggcagaattcatccccttctccgatcac
aatcagagccccaggaacatgtaccagtgccagatgagtaaacagacaatgggcttcccg
ctgcattcgtaccaagaacgaacagacaataaactgtaccgtctgcagacccctcagagt
cctctggtcagacccgcgatgtacgatcactacgatattgataactaccctattggcacc
aacgcgatagtggctgtcatttcttacaccggctacgatatggaagacgctatgatcgtc
aacaagtcttcatgggagcgtggcttcgctcacggtatggtttataagactgagctcata
gacctgtccgataagttcaaaggtgacgacagcattgtgtttggggtgaagccaggtgac
cccaaagtaatggacaaactggatgctgacggattgccgtttatcggctccatgctgaag
tatggagacccttactacagctacatcaatctcaataccggccagagttatgtggtcttc
ttcaagtaccaggagagctgtgtggtggacaacatcaaggtgtgcagcaatgacaccggc
actggccgcttcaagcgcatttgcatcacaacccgcattcccagaaaccccaccatcgga
gacaagttcgccagcagacacggtcagaagggaattctgagccgcctatggcccgcggag
gacatgcctttcacggagagcggcatgtgcccagatatcctcttcaacccgcacggcttc
ccctccagaatgaccatcgggatgctcatcgagagcatggctggaaaatccgcagccctc
cacggcttgtgtcacgacgccacgccgttcaagttctccgaggagagctctgcgctcgag
cacttcggcgagatgctgaaagccgcaggatacaactactacggcacggagcgcctctac
tccggcattagcggcctggagctcgaggcggacatcttcatcggggtggtttactaccag
cgcttgcgtcacatggtctctgacaagttccaggtcagaactacaggagcgagagataaa
gtgaccaatcagccgctgggagggaggaacgttcagggaggaatccgcttcggagagatg
gagcgggacgctctgcttgctcacgggacgtcgttcctgctccacgaccgtctctttaat
tgctcggaccgttctgcggcgcaggtttgcatgggctgcggcagcctgctgtcgccgctt
ctggagaagccgcctccttattggtcaaatacacgtcatcggaaaaccatttgcttgctg
tgcaacaagagcgactctatcgagactgtgtccgttccttatgtgtttaaatactttgtc
gcagagcttgcggcaatgaacgttaaaattaaattagatgtcaagtga
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integrated database retrieval system
