Puntigrus tetrazona (Sumatra barb): 122356759
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Entry
122356759 CDS
T08985
Symbol
ccdc88ab
Name
(RefSeq) girdin
KO
K25392
girdin
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ptet03037
]
122356759 (ccdc88ab)
Cilium and associated proteins [BR:
ptet03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
122356759 (ccdc88ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK_N
Glyoxalase_4
KASH_CCD
DUF4472
GAS
APG6_N
Motif
Other DBs
NCBI-GeneID:
122356759
NCBI-ProteinID:
XP_043111750
LinkDB
All DBs
Position
13:complement(1692424..1725306)
Genome browser
AA seq
1636 aa
AA seq
DB search
MDKMEQEVFTPLLEDFLLSPLVCWVKTVSPLGSDGSPLSEFMTLVDGVYLNDIMTEINPN
SGVQRAHRKVNADPTLRVQNLSILVQQIKSCYQETLQQLVVMSLPDVLVLGRTPLSEQGL
EEMRKILLLLLGCAVQCNRKEEYIDRIQMLDFDTQAAIAAHIQEVTHNQENVFDLQCVEE
SESVPHDKDAVFRQMTFNLKRLVDERDQHAEMVVSLALERDSGLSSLLTAPSPGESPSMR
RTESVQHLSVELADAKARIRRLRQELEEKTEQLLDCRQELEHMESEVKRLQQENLQLLCD
ARSLRAYRDELDALREKAVRVDKLESEVSRYKEKLHDIEFYRTRVEELKEDNQVLLETKS
MLEDQLESFRARSDKHHELEKENLQIKNKIHDMEMERDMDRKRMEELLEENLTLAVAQKQ
SMNESLHLGWELEQLSKTTPELTEVPQKSLGHEVSDLTSSQLLKLEKENQMLLRSVEELK
ASGESSSRLRLEKDNHKLSQQLEQLQAELSADRESLRSSESLSADLLKEKAQLEKTLETL
QQNSDRQVKGLEQENDHLNQTIASLRQRSQVSAEARVKDIEKENRVLHESIKETSSKLNK
MEFERKQLRKDLEHYKEKGERAEELEMEVHRLEREKESLQKRLAALAITCGKVEVLEKEN
AELEAESRKLKKAADGLRNVSYQLEVLEKENAQLDEENLELRRMVESLRSSGAKAVQLEL
ENKELESERTQLKKSLELLKATSKKNERLEVSYQSLDVENQRLQKALENSSRKIQQLEGE
LQDAELENQSLQQSLEELKISSKGLEQLAQENAGLEQENAQLEKDKKQLDKENKRLRQQA
EIKDSKLDEDHLRISQLEKENRSLGKEVSALKDMCGRVKDLEKDNKELVKQATIDKKTLV
TLREELVNEKLKCQQINNDLEKLTHELEKIGLNKEGLLGDEESSDDRFKLLECKLESTLR
SSLEIKAEKIAALEARLQESSNLNQQLRQELKTVKKNYEALRQRQEEECSAQSSPARGRE
DAQSVRKWEKESQEATRELLRVKDRLIEVERNNATLQAEKQALRTQLKQLESQSSNLQAQ
ILALQRQTASLQENNTTLQTQNAKLQVENSTLNSQSAALMSQNAQLQTQQSGTESERDVA
IREKEELRTVYDLLLHDHEKLSALHERQAAEYEDLIGKHGELKSGHKSLELQHRGLENRY
NQLLKQKTELEQLERELTAEREKMISDSRSHQDTAAQYQRLSEEHHTLSSTYQQLLKDNE
LLQTDHKTLKSQLNTARLEQTRLEAEFSKLKEQYQQLDITSTKLTNQCELLSQLKGNLEE
ENRHLLDQIQTLMLQNRTLLEQTMESKDLFHVEQRQYIDKLNELRRQKEKLEEKIMDQYK
FYDPSPPRRRGNWITLKMRKLIKPKSRERMRSLTQTPPRSESSEGFLTLPHPDSQDSSSV
GSGSNSLEDTLTLRSSRKRVEKSQTQASSNALKKLPFMRNRSKEKDRVKAVYRRSMSMND
LLQTMAVSEGQWSSSTDHLEAPDEAIGAQHVKEFGSLDYAGLCLTRGRSDTGAAVSSEDV
TQLSEEERAQGVMNECGSLTARAGLWTVRREQRGRSTGSVSLDSPARSSALEGKRRARST
VVLSRFKELYVIPAEE
NT seq
4911 nt
NT seq
+upstream
nt +downstream
nt
atggacaagatggagcaggaggtgttcacgcctttgttggaggattttctgctgtctccg
ctggtgtgctgggtgaagacggtctctcctctgggctccgatggctctcctctgtccgag
ttcatgacactggtggacggggtttatttaaacgacatcatgaccgagataaaccccaac
agcggcgtccagagagcccacaggaaggtcaacgctgacccgacgctgcgtgtccagaac
ctgtccatcctcgtgcagcagatcaagtcctgctatcaggagacgctgcagcagctggtg
gtgatgtcacttcctgacgtgctggtgctgggccggacccctctgagcgagcaaggactg
gaggagatgaggaagatcctgctgctgctgctgggctgtgctgtacagtgtaacaggaag
gaggaatacatcgaccggatccagatgctggactttgacacacaggcagccatcgccgct
cacattcaggaggtgacccataatcaggagaacgtgtttgaccttcagtgtgtggaggag
agtgagtctgtcccacacgataaagacgctgtcttcagacagatgacctttaacctcaaa
cgcctcgtcgacgagagagaccaacacgctgagatggtggtgtctctggctctggagcgg
gacagtgggctcagctctctcctgaccgccccgtctcccggcgagtctcccagtatgagg
cgtacagagagtgtgcagcatctgtcggtggagctggctgacgctaaagccaggatcaga
cgcctgcggcaggagctagaggagaagaccgagcagctgctggactgcagacaggagctg
gagcacatggagtcagaggtcaagagactgcagcaggaaaacctgcagttgctgtgtgat
gcgcggtcactgcgggcgtatcgtgacgagctggacgctctccgagagaaggccgtcagg
gtggacaaactggagagtgaagtgagccgctacaaagagaagctccatgacattgagttc
tacaggaccagagtggaggaactgaaggaggacaatcaggttctgctggagaccaagagc
atgctggaggatcagctggagtcattcagagctcgatctgataaacatcatgagctggag
aaggaaaatctgcagattaaaaacaagatccatgacatggagatggagcgagacatggac
aggaagcgcatggaggagctgctggaggagaacctgaccctagcggtggcccagaaacag
agcatgaacgagtctcttcatctgggctgggaactggagcagctctccaaaaccactcct
gaactcactgaagtgccgcagaagtctctgggtcacgaggtgagcgacctgacgtccagt
cagctgctgaagctggagaaggagaatcagatgctgctgaggagcgtggaggagctgaag
gcctccggcgagagcagctcacgcctccgactggagaaagacaaccacaaactcagccag
cagctggagcagctgcaggcggagctgagcgcagacagggagagtctgcgcagctctgag
agtctgagcgcagacctgctgaaggagaaggctcagctggagaagactctggagacgctc
cagcagaactctgaccgacaggtgaagggtctggagcaggagaacgatcatctgaaccag
accatcgcctcgctcagacagcgctctcaggtcagcgccgaggcccgcgtcaaagacatc
gagaaagaaaaccgcgtgctgcacgagtccatcaaagagaccagcagcaagctcaacaag
atggagtttgagcgcaaacaactccgcaaagacctggagcactacaaagaaaaaggagaa
agagccgaggagctggagatggaggtgcatcgactggagcgagagaaggagagcctgcag
aagcgtctcgctgctttggccatcacctgtgggaaggtggaggtgctggagaaggagaac
gcagagctggaagcggagagcaggaagctgaagaaagcagcggacggtctgaggaacgtc
tcttatcagctagaggtcctggagaaggaaaacgctcagctggacgaagagaacctggag
ctccggcgcatggtggagtctttacggtcctccggagcgaaggctgtccagctggagctg
gagaacaaagagctggagagcgagagaactcaacttaaaaaaagcctcgagctgctgaag
gctacgtccaaaaaaaacgagcgtctggaagtcagttaccaaagcctagatgtggagaac
cagcggctccagaaagccctggagaacagcagccgcaagattcagcaactggagggagag
cttcaggacgcagagctggagaaccagagcctgcagcagagcctggaggagctaaagatc
tccagcaagggtctggagcagctggcacaggagaacgccggcctggagcaggagaacgcc
cagctggagaaggacaagaagcagctggacaaggagaacaaacggctgcggcagcaggct
gaaatcaaggactccaagctcgatgaagatcacctgcgcatctcacagctcgagaaggag
aatcgctcgctgggcaaggaggtctctgctctcaaagacatgtgtggacgcgtgaaagac
ctagagaaggacaataaagaactggtcaaacaagccaccatagacaagaagaccctggtc
actctgagagaggagctggtcaatgaaaaactaaagtgccagcagattaacaatgatctg
gagaagctgacccatgagcttgagaagatcggcctcaataaagaggggcttctgggtgat
gaagagagctctgatgacaggtttaagcttctagagtgtaagctggagtccactctgagg
tcgtctctggagatcaaagcggagaagatcgctgctctggaggcccgactgcaggagtcc
tccaacctcaaccagcagctgcggcaggagctcaaaacggtgaagaagaactacgaggct
ctgcggcagcggcaggaggaggagtgttcggctcagagctcgcccgctcgaggacgggag
gacgctcagagcgtcaggaaatgggagaaggagagtcaggaggccacacgagagcttctg
agggtcaaagaccggctcatagaggtggagagaaacaacgccactctccaagcagagaag
caggctctccgcacacagctgaagcagctggagtcccagagcagtaatctacaggcgcag
atattagctcttcagagacagaccgcgtctctccaggagaacaacaccacgctacagaca
cagaacgccaaactacaggtggagaactcgacgctgaactctcagagcgccgcgctcatg
tcccagaatgctcagctgcagacccagcagtcgggcacagagagcgagagggacgtggcc
attcgagagaaggaggaactgcgcacggtctacgatctgctgctccacgaccacgagaag
ctgtcagcgctgcacgagaggcaggcggccgagtacgaggacctgatcggcaaacacgga
gagctgaagagcggccacaagagcctggagctgcagcaccgcggcctggagaacaggtac
aaccagctgctgaagcagaagaccgagctggagcagctggagagagagctcacagcagag
cgggagaagatgatctctgacagccggagtcaccaggacacggccgcgcagtaccagaga
ctgagcgaggagcaccacacgctcagctccacctaccagcagctcctgaaggacaacgag
ctcctgcagacggatcacaagaccctgaagagtcagctgaacacggcccgtctggagcag
acgcgtctggaggcagagttctccaaactcaaggagcagtaccagcagctggacatcacc
tccaccaaactcaccaaccagtgcgagttgttaagtcagctgaaggggaacctagaggag
gagaaccggcacttgctggatcagatccagaccctcatgctgcagaaccggaccctgctg
gagcagaccatggagagcaaagacctgttccacgtcgagcagagacaatacattgataaa
ctcaatgagctgaggagacagaaagagaaactggaggagaagattatggatcagtataag
ttttatgacccgtctcctccgcgacggaggggcaactggatcacgctgaagatgaggaag
ctgatcaagccgaagagtcgcgagcgcatgcgttctctcacacagaccccgccccgctcc
gagtccagcgaaggcttcctcaccctgcctcatccggacagtcaggacagctcgtccgtg
ggctcggggtctaactctctggaggacacgctgaccctccgcagcagcaggaagagagtt
gagaaaagccaaacgcaggcttcctctaacgcgctgaaaaagcttccgttcatgaggaac
cgatccaaggagaaagaccgagtgaaggccgtctaccgccgctctatgtccatgaacgac
ctgctgcagacgatggctgtgtccgagggccagtggtccagcagcacagatcatctggag
gctccagacgaggccatcggggcccagcatgtgaaggagttcgggtccctggactacgcc
gggctgtgtctgacccggggccgctccgatacaggagcagccgtgtccagtgaagacgtc
acgcagctgtcggaggaggagcgagctcagggtgtgatgaatgagtgcggcagcctcaca
gcgagagccggcctctggacagtccggcgagagcagcgagggcgatccacaggcagtgtg
agtctggacagtccggcgaggagcagcgctctggagggcaaacgcagggctagatccaca
gtggtgctcagcaggttcaaagagctctacgtgatcccagccgaggaataa
DBGET
integrated database retrieval system
