Puntigrus tetrazona (Sumatra barb): 122356785
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Entry
122356785 CDS
T08985
Symbol
tnn
Name
(RefSeq) tenascin-N isoform X1
KO
K06252
tenascin
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04510
Focal adhesion
ptet04512
ECM-receptor interaction
ptet04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122356785 (tnn)
04518 Integrin signaling
122356785 (tnn)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122356785 (tnn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ptet00536
]
122356785 (tnn)
Glycosaminoglycan binding proteins [BR:
ptet00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122356785 (tnn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
EGF_2
EGF_Tenascin
Pur_ac_phosph_N
Fn3_VIN3
Interfer-bind
NDNF
SdrD_B
DUF7949
EGF
hEGF
Motif
Other DBs
NCBI-GeneID:
122356785
NCBI-ProteinID:
XP_043111783
LinkDB
All DBs
Position
2:complement(16457757..16485204)
Genome browser
AA seq
1020 aa
AA seq
DB search
MIVRFNRLKRGLFLLGMLFMVSRPVLSEEVGPAEKEVTFSHVYRIDSGCKKGSQVAQLSQ
DQASEGQLVTVDGENDIVFKHNIRLQSAGCGCADSEDFKALLYRVNGLEEEVTYLKSQCA
QGCCKGGSGVDTSCSGHGTYQHDSCSCKCNPGWEGPDCSISSCPDECNDNGRCVDGRCVC
YEGYTGHDCSQLTCPNDCKDKGHCVDGKCVCFSGFSGEDCSIATCPNDCIGNGRCVDGQC
ICDEGFFGIDCSMVLGPKGLRLIKATDVSLLVEWESVRGAEYYILSYHPKGDKGAIKEVQ
VENTKNSYLITGLRPGVTYIVQVYAVIRGINSESDEIVATTEISGIEGIKVLSQTEDSIQ
VDWKNPALSVDFFKLTHASPDGQEGQENVAMSQEARTKHTIVGLNPGTQYQIGVQAIKGE
SEGKPSYATGVTDIDSPTNLATREVTENSATVTWDGVRADIDGYILTYSSAEGTSREIKV
AADATSHQLTSLKPGVLYTVFLWAYKGSRSSRKSMTEAETDIDAPTNLMTREVTEDSALG
TWNKVQADIDGYMLSYSSIDGSGQEVGVGADSTSYRFTALKPGVLYTVYVWAIKGPRSSK
KSSTEAETDIDAPTNLLTREVTEDSALVTWNKVQADIDGYMLSYSSIDGSGQEVGVGADS
TSYRFTALKPGVLYTVYVWALKGPRSSRKATAEAETEIDAPKNLKAIDVQTQTSTITWKA
PQANIDGYILTYRAEDGSMQNVEKMLTAQENRFALSGLAMGKKYIVTLIAYRGTKRSRVV
ETSFSTVGLAYPFPMDCTQIMRNGNMESGVYTIYVNNNRSRTMQVYCDMTTDGGGWIVFQ
RRNTGKLDFMRRWREYIKGFGELTDEFWLGLDKIHELTNTPTQYEVRFDLGSGSERKYAV
YDNFKIAPSKQKFKLTIGNYKGNAGDAMTYHQGGSFSTVDSDNDIALGNCALTHQGAWWY
KNCHLANLNGRFGDLRHSMGVNWEPWKGHLQSLDFAEIKIRPVGAAGRQKRSLKRRVAVY
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgattgtaagattcaatcggctgaagagaggcctcttccttctagggatgctctttatg
gtgtcccgtcctgtgctttctgaggaggtgggtcctgcagagaaagaagtcacgtttagc
catgtctacaggattgactctggttgtaagaagggttctcaggtggctcagctttcccag
gaccaggcctcagaagggcagttagtcacagtggatggagagaatgacattgtctttaag
cacaacatacgtctgcagtcggctggttgtggatgtgcagattctgaggacttcaaagcc
ctgctgtaccgagtaaatggcctggaagaggaagtcacctacctaaagagtcaatgtgct
cagggctgctgcaaaggagggtcaggtgtggacactagctgcagtggacacggcacatac
cagcatgactcttgcagttgtaagtgtaacccaggttgggagggtccagactgctcaatc
tcatcttgccctgatgaatgcaacgataatggccgctgtgttgacggacgctgcgtgtgc
tatgaaggctacactggccatgactgcagccagctcacgtgtcccaacgactgcaaagac
aaaggccactgtgtggatggcaaatgtgtgtgctttagtggattctcaggagaagactgc
agtatcgccacctgtccgaacgactgcataggaaatgggcgctgcgtggatggacagtgc
atctgtgatgaggggttctttggaatcgactgctccatggtcctaggaccgaaaggtctc
cgtctgatcaaagccacagatgtatctctgctggtggagtgggagtctgtgagaggagct
gagtactacatcctgtcctaccatcccaagggagacaagggagccattaaagaggtccag
gtggaaaacacgaaaaactcctacctgatcacaggcctcagacccggagtcacgtacata
gtgcaggtgtacgctgtcatcaggggcattaacagtgaatccgatgagatagtggctact
actgagatctctggtattgaaggaatcaaggtgttgagtcagacagaggactcaatccag
gtggactggaagaaccctgcgctttccgtggacttcttcaaattgacccatgctagccct
gatggtcaggaagggcaggagaacgtggcaatgagccaagaggccagaactaaacacacc
attgtaggccttaacccaggaacacaatatcagataggtgtgcaagcaatcaaaggtgaa
agcgaaggcaagccgtcatatgccacaggggtcacagacattgattccccaaccaatctg
gcaaccagggaggtgacggagaactccgcaaccgtgacgtgggatggtgttcgcgctgac
atcgatggctacatactgacttacagctcggcagagggcaccagccgagaaattaaagtg
gccgcagacgctacttctcaccagctgacctctctcaaaccaggagtcctgtacacagtt
ttcctctgggcctacaagggctctcgttccagtaggaagagcatgaccgaagcagagacg
gatatagacgctcctactaacctcatgaccagagaggtgacagaggactcggcgttgggg
acgtggaacaaggtgcaggccgacattgatggctacatgctgagctacagctctatagat
ggctccggtcaggaggttggagtaggagctgacagcacctcctacaggttcactgctctg
aagcctggagttctctacacagtctatgtgtgggccatcaagggccctcgctctagcaaa
aagagctcgacagaagcagaaacagatatagacgctcctactaacctcttaaccagagag
gtgacagaggactcggcgttggtgacgtggaacaaggtgcaggccgacattgatggctac
atgctgagctacagctctatagatggctccggtcaggaggttggagtaggagctgacagc
acctcctacaggttcactgctctgaagcctggagttctctacacagtctacgtctgggct
ttgaaaggccctcgctcaagcagaaaagccacagctgaggctgaaacagagattgacgcg
ccaaagaacctcaaagccattgatgtccagactcaaacctccactataacatggaaagct
cctcaggctaatattgatgggtacatcctgacatatagggctgaggatggcagcatgcag
aatgtggaaaaaatgttgactgcgcaggagaatagatttgctctttctggccttgcaatg
ggcaaaaagtacattgtcactcttattgcctacagaggcaccaagaggagtagagtagtg
gagacaagctttagcacggtgggcctggcctacccgttcccaatggactgcactcagatt
atgaggaatggaaacatggagagtggcgtctacacaatttacgtcaacaacaaccgtagc
agaactatgcaggtgtattgtgacatgacaactgatggcggcggctggattgtgttccag
agacgaaacaccggcaaattagatttcatgaggcgctggagagagtatatcaaaggcttt
ggagaactgacagatgaattttggctcggcttggacaagatccacgaactgactaatact
cctacacaatatgaagtgcgtttcgatctaggctcgggatcagagcggaaatatgccgtc
tacgataacttcaaaatagcaccttccaaacagaagtttaagctcaccatcggcaactac
aaaggaaatgctggtgatgccatgacctaccaccagggagggtctttctccacagtggat
tcagacaacgacattgcgctcggtaactgtgctctgactcaccaaggtgcttggtggtac
aagaactgccacctggccaatctgaacggcagatttggggacctcagacacagtatgggt
gtaaactgggagccatggaagggacacctccagtctctcgacttcgcagaaattaagatc
cggccagtgggagcagcaggaagacagaagaggtcattgaaaaggagagtagctgtgtat
taa
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