Puntigrus tetrazona (Sumatra barb): 122356856
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Entry
122356856 CDS
T08985
Symbol
gabrb1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04080
Neuroactive ligand-receptor interaction
ptet04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122356856 (gabrb1)
04082 Neuroactive ligand signaling
122356856 (gabrb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptet04040
]
122356856 (gabrb1)
Ion channels [BR:
ptet04040
]
Ligand-gated channels
GABA-A
122356856 (gabrb1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
122356856
NCBI-ProteinID:
XP_043111859
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Position
13:complement(5987132..6009530)
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AA seq
484 aa
AA seq
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MMRGMLIARDHWRAGILCLLVLVALTVGRSPPAHSVNEPSNMSYVKVTVDKLLKGYDIRL
RPDFGGPPVDVVMSIDIASIDMVSEVNMDYTITMYFQQSWRDKRLSYTGIPLNLTLDNRV
ADQLWVPDTYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDE
QNCTLEIESYGYTTDDIEFYWQGGSSVTGVDNIELPQFSIIDYKTLSTKAVFATGSYPRL
SLSFKLKRNIGYFILQTYMPSTLITILSWVSFWINYDASAARVALGITTVLTMTTINTHL
RETLPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGRGPHLQKKVAEKAAKSNNEK
IRLESNKVQVDVHGNIPLTNLDLRLSGAEMLGALGDPRNTMFSYDSASIQYRKPLTGRDL
YGRPTASVERPMARKKSRLRRRAAQLKVKIPDLTDVNAIDKWSRVIFPITYTFFNLVYWL
YYVH
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgatgagagggatgctgatcgctcgggatcactggcgcgcggggatcctgtgtctcctt
gtgctcgtggctttgacggtgggtcgtagtccgccagcgcacagcgtaaacgaaccaagc
aacatgtcatatgtcaaagttactgtggataaactactcaaaggctacgacatccgtctc
aggcctgactttggaggtcctccggttgatgtcgttatgagtatcgacatcgccagtatc
gacatggtgtcggaagtgaacatggactataccatcaccatgtatttccagcagtcttgg
cgtgataagcgcctgtcttacacagggattcctctaaatcttaccttggataaccgagtg
gctgatcaactctgggtgcctgatacttactttataaatgacaagaaatcttttgtccat
ggggtcacagtgaagaaccgcatgattcgcctgcatcctgatgggactgtgctctacggc
ctcaggataactaccacagctgcttgtatgatggatttgcgcagatacccgctggatgag
cagaactgcacgctggagattgaaagttatggctacaccacagatgacattgagttctac
tggcaaggaggaagttcggtgacgggggtggacaacattgagctgccgcaattctctatt
attgattataaaacactgtccacgaaagcggtgtttgccacagggtcatatcctcgtctt
tctctcagttttaaactgaagagaaacattggctatttcatcctgcagacctacatgccc
tcaacattgatcaccatcctgtcctgggtttctttctggatcaactatgatgcttccgct
gcaagagttgcgctaggaatcaccaccgttctgactatgaccacaatcaacactcatctt
agggagactttacctaagatcccttatgtgaaggccatagacatctatctgatgggctgc
tttgtctttgtgttcctggccttgctcgagtatgccttcgtcaactacatattcttcggc
cgtggtccacacttacagaagaaagtggcagaaaaggctgcaaaaagcaacaatgaaaag
attcgcttggagagtaacaaagttcaggttgatgtccatggaaacattcccctgacaaac
cttgacctgcgccttagcggagcagagatgttaggggctcttggggacccgaggaacacc
atgttctcttatgatagcgccagcatccaataccgtaagccccttacaggtcgggacctc
tacggccggcccactgcctctgtcgagaggccaatggcacgaaaaaagagtcgtctaagg
aggcgagccgctcagctaaaggtgaagattccagacctgacagacgtaaacgccatcgac
aagtggtcacgtgtcatctttcccatcacctacaccttcttcaacttagtatactggttg
tattatgtccactag
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