Puntigrus tetrazona (Sumatra barb): 122357006
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Entry
122357006 CDS
T08985
Symbol
mlh1
Name
(RefSeq) DNA mismatch repair protein Mlh1
KO
K08734
DNA mismatch repair protein MLH1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03430
Mismatch repair
ptet03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
122357006 (mlh1)
03460 Fanconi anemia pathway
122357006 (mlh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptet03400
]
122357006 (mlh1)
DNA repair and recombination proteins [BR:
ptet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
122357006 (mlh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Stathmin
Motif
Other DBs
NCBI-GeneID:
122357006
NCBI-ProteinID:
XP_043112112
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Position
13:16564308..16570793
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AA seq
719 aa
AA seq
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MAGVIRRLDETVVNRIAAGEIIQRPANAIKEMMENCLDAKATNIQITVKEGGLKLILIQD
NGTGIRKDDMEIVCERFTTSKLQSFEDLSSIATYGFRGEALASISHVAHVTITTKTADAK
CAYRANYCDGKLKAPPKPCAGNQGTLISVEDLFYNVSTRRKALKSPSEEYSRIVEVVSRY
AIHNSGKSFSVKKQGEMVADVKTLQNASVLDNIRAVFGVAVSRELIEVECEDQKLAFKMK
GYVSNANYSVKKCILILFINHRLVESSALKKAIETVYTAYLPKNTHPFLYLSLEIAPQNI
DVNVHPTKHEVHFLHEDSIIESIQKHTESKLLGSNSSRTYFTQTLLPGLSASTSATKASS
SSADSQERVYAHQMVRTDSKVQKLDAFLQPSASQSRPDKASSSSTAPQGSAEPDDSELLT
ALDVLEPCEAEDPQTDSQPPPEEAPPRKRPHVEEVKEDLTAASLPRRRTIKLTSIKELRE
DIEKQAHKGLQDLLQNHSFVGSVNPQWTLVQHQTKLYLLNSTKLSQELFYQILIYDFGNF
GVLRLSNSAPLYDLAMLALDSEESGWTEEDGPKEGLAQYIVDFLKQKAEMLEEYFSLEID
EEGNLTGLPMLLDNYTPAMEGLPMFILRLATEVNWDQEKECFHDFSIECSNFYSVRKQYT
LEPDAEEPQDAEMSWQWKVEHVLFKALRTLFSPPKHFSEDGSILQIASLPELYKVFERC
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagtcatccgcaggctcgacgagactgtagtaaaccgcatcgcagcaggagag
attatccagcggcctgccaatgctatcaaagagatgatggagaactgtttggacgcaaag
gccacaaatatccagataacggtgaaagagggcggactgaagctcatcctcattcaggac
aacggcactggcatcaggaaagatgatatggaaatagtctgtgaacgttttacaaccagc
aagcttcagtcttttgaggacttgtcgtcaatcgcaacatatggattcagaggagaggct
ctggccagtataagtcacgtagcccatgtcacgatcaccactaaaacagccgatgcaaaa
tgtgcctacagggccaattactgtgatgggaagctgaaagctcctcccaaaccctgtgct
ggaaaccaagggactttaatttctgtcgaagatctgttctataatgtgtctacacgacgg
aaagccctgaagagccccagtgaagaatattccagaatcgtcgaggttgtgagcagatac
gccattcacaactccgggaaaagcttttctgtcaagaagcaaggtgagatggtcgcggat
gtgaagacccttcagaacgcctctgtgctggacaacattcgtgctgtgtttggtgtagct
gttagcagggagctgattgaagttgagtgtgaagatcagaaacttgcttttaaaatgaag
ggctacgtctccaatgccaactactctgtcaagaaatgcatccttatcctcttcatcaac
catcgcttggtggaatctagtgccttgaagaaagcaatcgagaccgtctacaccgcttat
cttcccaaaaacactcatccttttctttatcttagtttagagattgcccctcagaatatt
gacgtgaacgttcaccccacaaagcacgaggtgcacttcctgcacgaggacagcatcatc
gagagcattcagaaacacactgagagtaaactgctcggctcgaactcctcgcgcacatac
ttcacacagactctgcttccaggactttcggcgtccaccagcgcaacaaaagcctctagt
tcttcagcagattcccaggagcgtgtgtacgcccatcagatggtccgcactgacagcaaa
gtccagaagctggatgcgtttctccagccatcagcttctcagagcaggccagataaagcc
tccagctcttccactgctcctcagggttcagccgaaccagacgactctgagctgctgact
gctctggacgttctggagccgtgtgaagcagaagatccacagacagacagtcaacctcct
cctgaagaagcaccaccaaggaaaaggcctcatgttgaggaagtgaaggaggatttgacg
gccgcctctctgcccaggagacgcaccattaaactgaccagcataaaggagctccgggaa
gatattgagaagcaagctcacaaaggtttgcaggatctgctccagaatcactcatttgta
ggatcagtcaaccctcagtggactctagtgcagcaccagaccaaactctacctgctcaat
tcaaccaaactcagtcaggagctgttttatcaaattttgatttacgattttggtaacttt
ggggttcttcgattgtcgaattcagctccgctctatgatttggccatgttggctcttgat
tcggaggagagtgggtggacggaggaggatggtccaaaagaaggactggcacagtacatc
gtggattttctgaagcagaaagcagaaatgctggaagagtatttttctctagaaatcgat
gaagaagggaacctgaccggtctgccaatgctgcttgataattacactcctgctatggag
ggtcttcccatgttcattctgcgtttagccacagaggtgaactgggatcaagagaaagaa
tgttttcatgacttcagcatagaatgcagtaatttctattccgtaaggaaacaatacacg
ctggagccggatgctgaagagccacaggacgcagaaatgagctggcagtggaaagtggaa
catgtgcttttcaaagcgctccgcactctcttcagtcctccaaagcacttcagtgaagac
ggcagcattctgcagatagccagcctgcctgaactctacaaagtctttgaaagatgctaa
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