Puntigrus tetrazona (Sumatra barb): 122357080
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Entry
122357080 CDS
T08985
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04137
Mitophagy - animal
ptet04140
Autophagy - animal
ptet04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122357080 (hif1aa)
04137 Mitophagy - animal
122357080 (hif1aa)
04148 Efferocytosis
122357080 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptet03000
]
122357080 (hif1aa)
Transcription factors [BR:
ptet03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
122357080 (hif1aa)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
Hl_ALG44
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
122357080
NCBI-ProteinID:
XP_043112208
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Position
13:11712438..11724360
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AA seq
733 aa
AA seq
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MLESNLTMDSVAPGKKRVSSERRKEKSRDAARCRRGKESEVFYELARELPLPHSVTSNLD
KASVMRFALSYLRLRKLLNTDVLIEESELDSQWNSSYLKALDGFLMVLSADGDIVYLSEN
VSKCLGLPQIDLTGHSVFEFTHPCDHEELREMLAHRTGLPKKAKEQHKNRSFLLRMKCTL
TSRGRTVNVKSASWKVLRCSGHIRTTDGIKKGVCEEKNVCSTYLVLICESIPHPVNIEAP
LDSRTFLSRHTLDMRFTYCDERITGLLGFEPVDLLQHSVYEYYHALDSDHMTKTHHNLFV
KGQVCTGQYRLLAKAGGFAWAETQATVIYNSKNSQPQCVVCVNYILSGIEQPEQILSLQQ
TNSTKIKQEQEEHHKESLGTEMTMAELKKEAKAKDEKEECVREELHDSLKGEPEALTGAD
PVLTLDITSTESALSVLTEIPLYNDVMLPSSSVLLPLSPLSPPCSSLNDDDASTAHLQPD
DFQFPQSSPPDSSRSQVDIPVDSELSDELKPDQVERLFSMDIESKTPFNTQGVSLDLEML
APYIPMDDDFQLRTGSPAESMCSSPGAAFELTPSSSTQTAPALPAAPLDLVSCDTVPQNI
RTTEQDNSREIIQDGDISSKCQTNPKPLKRKLETIPLSEAIRLGSVLQVVTDFPEKKVRK
SDASSSEGIRHATILLLPSDVASRLLSRSSEGGAIAMPLPQLTRYDCEVNAPVTGRQHLL
QGEELLCALDLVI
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgttggagtccaatttgaccatggattcagtcgcacctggaaaaaaaagagtgagttca
gaacgaaggaaggaaaaatccagagatgcggcacgttgtcggagaggaaaagagtctgag
gtgttttatgaactggccagagaactgcccctcccccacagtgtcacctctaacctggat
aaagcatcagtcatgagatttgcactcagttatctacggctgcgtaaactactgaacaca
gatgtactgattgaggagtctgaattagattctcagtggaacagttcgtatctgaaagct
ctggatgggtttctcatggttctttctgctgatggcgacattgtctacctgtcagagaat
gtcagcaagtgtctgggccttcctcagatcgacctcactggacatagtgtgtttgagttt
actcatccatgtgaccacgaagagctcagagaaatgctggcacacagaaccggtctgcct
aaaaaagccaaggagcagcacaaaaacagaagttttctactgaggatgaaatgtaccctg
accagtagagggcgcaccgtcaatgtcaaatcggcctcctggaaggtgctgcgctgttcg
ggccatatccgcacaacagatggcatcaagaaaggtgtatgtgaggaaaaaaacgtgtgt
tcaacgtacctggtgctcatctgtgagtctattccccacccggtgaacattgaggctcct
ctggattctagaacatttctcagccgccacactttagatatgcgcttcacctactgcgat
gagaggatcacagggctgttgggttttgagccagtggatctgttgcagcattctgtgtat
gaatactatcacgcgctggattctgaccacatgaccaaaacacaccacaacctgtttgtg
aagggacaggtgtgtactggacagtaccggctgctggctaaagcaggagggttcgcttgg
gcagagactcaagccactgtgatctataacagtaaaaactcccagccacaatgcgtggtc
tgcgtcaactacattctcagtggcattgaacagcccgaacaaatcctgtcccttcagcaa
accaacagcacaaaaataaaacaggaacaggaagaacaccacaaggagtcactcggaact
gaaatgactatggcagagttgaaaaaggaggcaaaggcaaaggatgagaaggaggagtgt
gtgagagaggagctacatgacagcctgaagggggagccagaggcactgactggagcagac
cccgtcctcactctggatatcaccagcacagaatccgcactctctgtgttgacagaaatt
cctctctacaatgatgttatgttgccctcttcaagtgttcttttacctctctcgcccctc
tctcctccctgctcctccctaaatgacgatgacgcctccacagcccatctacaacctgac
gacttccaattcccacaatcttcgcctcctgattcctccagatcccaggtcgatatccct
gtggattcagaattaagtgacgagcttaaaccggatcaagtggaaaggctattttctatg
gatatagagtccaagacaccctttaatacacagggagtgagtttggatctagagatgctg
gctccgtacattcccatggatgatgatttccagctgcggactggttctccagccgagtcg
atgtgttccagccctggggcagcatttgaactgaccccctcgagcagcacacaaactgcc
cctgctctcccagctgcccctctagacttagtgtcctgtgatactgttccgcagaacatt
agaaccacagagcaggacaacagcagggaaattattcaagacggtgatatttcttctaaa
tgtcagaccaacccaaagccactcaagagaaaactggagaccatacctctgtctgaagca
ataaggctgggttctgtgctgcaggtggtgactgattttccagagaaaaaggtcagaaaa
tcagatgcttcatcatcagaagggattcgtcatgccacgatactgttgctgccatctgat
gttgcgagtaggttattgagcagatcgtcagagggtggagccatagcgatgcccctcccc
cagcttacccgttacgattgtgaggtaaatgcacctgtgactgggcggcagcacctgcta
caaggggaggagctactgtgtgccttggacctagttatttaa
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