Puntigrus tetrazona (Sumatra barb): 122357165
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Entry
122357165 CDS
T08985
Symbol
shhb
Name
(RefSeq) tiggy-winkle hedgehog protein
KO
K11988
sonic hedgehog
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
122357165 (shhb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ptet01002
]
122357165 (shhb)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ptet00536
]
122357165 (shhb)
Peptidases and inhibitors [BR:
ptet01002
]
Cysteine peptidases
Family C46: hedgehog family
122357165 (shhb)
Glycosaminoglycan binding proteins [BR:
ptet00536
]
Heparan sulfate / Heparin
Morphogens
122357165 (shhb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
DUF7764
Vint
Peptidase_M15_3
Ribosomal_S6e
Hom_end_hint
Motif
Other DBs
NCBI-GeneID:
122357165
NCBI-ProteinID:
XP_043112367
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All DBs
Position
2:complement(14077992..14083464)
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AA seq
416 aa
AA seq
DB search
MDVRLHLKQIAFLCFISLLLTPCGLACGPGRGYGKRRHPKKLTPLAYKQFIPNVAEKTLG
ASGKYEGKITRNSERFKELIPNYNPDIIFKDEENTNADRLMTKRCKDKLNSLAISVMNQW
PGVKLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGMLSRLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSSTVTLADGRRKRVKDLKAGDRVLAADEEGNVLLSD
FIMFVDHDPTTRRRFVVIETSEPFAKLTLTAAHLVFVGNASASSGTTATYASNVKPGDTV
LVSGGTGKSLESVAVKRIYTEEHVGSYAPVTAHGTIIVDRVLASCYAVIESHKWAHRAFA
PVRLSHELMTWLFPARDSNVTFQEDGIHWYSNVLFHIGSWLLDRDSFHPLGISHLS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggacgtaaggctgcatctgaagcaaattgcttttctgtgtttcatcagcctgcttctg
acgccttgtggattagcctgtggtcccggtagaggttatggaaaacgaagacacccaaag
aaattaaccccgttggcttacaagcaattcattcccaacgttgccgagaaaacgctcggg
gccagcggcaaatacgaaggcaaaatcacaaggaattcagagagatttaaagagctgatt
ccgaattataatcccgatatcatctttaaagacgaggaaaacacaaacgctgacagactg
atgaccaagcggtgtaaggacaagttaaattcgttggcgatatccgtcatgaaccagtgg
ccaggtgtgaaactgcgcgtcactgaaggctgggatgaagacggtcaccatttcgaagag
tctttacactacgagggacgggcggtggacataactacctcagacagggataaaagcaag
tatgggatgctatctaggcttgcagtggaggcaggattcgactgggtctattacgaatcc
aaagcccatatacactgctccgtcaaagcagaaaattcagtcgctgctaaatcgggggga
tgctttcctggatccagcacggtcacgctcgcagacgggaggaggaaacgcgtcaaagac
cttaaagcgggcgaccgggttttagcagcggacgaggagggaaacgtcttattaagcgac
ttcatcatgttcgtggaccacgacccgacgacgagaaggcgattcgtcgtcatcgagacg
tcggagcctttcgcaaagctcaccctcacagccgcgcacctcgtctttgtcggaaacgcc
tcggcgagttctgggacgacagcgacgtacgccagcaacgtgaaacccggagacacggtt
ttagtgtcgggaggtacaggcaagagcctcgagagcgtcgcagtgaagaggatttacacc
gaagagcacgtgggctcttacgcgccagtcaccgctcacggaaccattatagtggatcgg
gtgctggcttcgtgttacgcggtcattgagagccacaaatgggcgcaccgggctttcgcg
ccggtcaggttaagtcacgagctgatgacgtggcttttcccggctcgtgattcaaacgtc
acttttcaggaggacggcatccactggtactcaaacgtgctgtttcacatcggctcttgg
ctgctggacagagactctttccatccgctcgggatttcgcatttaagttga
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