Puntigrus tetrazona (Sumatra barb): 122357454
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Entry
122357454 CDS
T08985
Symbol
nr3c1
Name
(RefSeq) glucocorticoid receptor
KO
K05771
glucocorticoid receptor
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122357454 (nr3c1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptet03000
]
122357454 (nr3c1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ptet03310
]
122357454 (nr3c1)
Transcription factors [BR:
ptet03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
122357454 (nr3c1)
Nuclear receptors [BR:
ptet03310
]
3. Estrogen like
3C. 3-Ketosteroid receptor
122357454 (nr3c1)
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Gene cluster
GFIT
Motif
Pfam:
GCR
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
122357454
NCBI-ProteinID:
XP_043112781
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Position
14:19584209..19604872
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AA seq
738 aa
AA seq
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MDQGGLKNGAKRDDHLNTLDYSNSPVEGILRSGIQSAMSVAPTSLVPQPSPLMQPVSGDL
PNGLSNSPTLEVHTTSMSSTLGLFGEDPELKVVGKEQRSQQHQTLGAFTLGDSFSGLEAS
IADLNSASPSVDSLIGGVDPNLFHLKTEDFSPMDKGDMDLDQDSFGPIGKDVDVGNHKLF
SDNTLDLLQDFELDGSPSDFYVTDDAFLSTIGEDALLGELPTNTERDSKAAVNGSTAASS
PSSVSTASTSLPAVKVEKDSIIQLCTPGVIKQENNGGTNYCQASLHSTPINICGVTTSSG
QSFLFGTGPSAAAVGQQKDQKPIFNLYTPVTSSEGGWGRGQGFGNAGECFSKNYASPYAR
PEDSTATSPAGGKSGTHKSCLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNYLCAGRN
DCIIDKIRRKNCPACRYRKCLMAGMNLEARKTKKRQTTGKVIQQPSIPERSLPPLPEIQA
LVHKPMPQVVPTMLSLLKAIEPDTIYAGYDSTIPDTSTRLMTTLNRLGGRQVISAVKWAK
ALPGFRNLHLDDQMTLLQCSWLFLMSFSLGWRSYQQCNGNMLCFAPDLVINEERMRLPYM
TDQCEQMLKISNEFVRLQVSNEEYLCMKVLLLLSTVPKDGLKSQSVFEELRMSYIKELGK
AIVKREENSSKNWQRFYQLTKLLDSMHDMVGGLLNFCFYTFVNKSLSVEFPEMLAEIISN
QLPKFKAGSVKSLLFHQK
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaggaggactcaagaacggcgccaagagagatgatcatttgaacacactggat
tacagcaacagcccagtcgagggaattttacgaagtggaatacaaagcgccatgtccgtc
gcgcccacctcgctggttcctcagcccagtccactgatgcagccggtttccggggacctt
cccaatggcctgagcaactcgcccactctggaggtgcacaccacctccatgtcctccacc
cttggcttgttcggcgaagatccagagctcaaagtggttgggaaggagcagaggtctcag
caacaccagaccctgggagctttcactttgggagacagcttctctggtctggaggccagc
atcgcggacctcaacagcgcctccccttcggtggactccctgatcggtggagtcgacccc
aatctctttcatttaaaaacagaggacttttcacccatggataaaggcgatatggacctt
gaccaagattccttcgggcccatcgggaaagatgttgacgtcggcaatcataagctcttt
agtgacaacactcttgacctcctgcaggacttcgagttggacggatctccttccgatttc
tacgtgacggatgacgccttcctctccaccataggcgaagatgctctgctcggagagctg
ccgactaatacggagagggactcgaaggctgcggtcaatggctcgaccgccgcttccagc
ccctccagcgtcagcacggcctccaccagcttgcccgccgtgaaggtggagaaggactcc
ataatccagctgtgcactcctggggtcatcaaacaggagaacaacggtgggactaactac
tgtcaggcgagtctgcacagcacgcccattaacatttgcggtgtcaccacatcgagtgga
cagagcttcctgtttgggaccggcccttccgcagctgctgtcggtcagcagaaagatcag
aagcccatctttaacctgtacacccccgtgacctcttcggaaggcggctggggcaggggc
cagggctttgggaacgccggcgaatgcttttctaaaaactacgcaagcccatatgccaga
cctgaagacagcactgccacatccccggctggcgggaagtccggcacgcacaagagctgt
ctcgtgtgctcagatgaagcttcaggctgccattacggagtcctcacctgcggaagctgt
aaagtcttctttaagagagcagtggaagggcaacacaattacctgtgcgctggacgaaat
gattgcatcatcgacaaaatccgccggaagaactgccctgcctgtcgttaccgcaaatgc
ctaatggcaggcatgaacctagaggcccgtaaaaccaagaagcgtcaaaccaccggcaag
gtgatccagcagccgtcgattccagagcgcagtcttcctccgctgcccgaaatacaggcg
ctggtgcacaaacccatgcctcaggtggtgcccaccatgctgtcgctgctaaaggccatc
gagccggacaccatctacgccgggtacgacagcaccataccggacacctccacccgcctc
atgaccactctgaacaggctgggcggccggcaggtcatctctgcggtcaaatgggccaaa
gctctgccaggtttccggaaccttcacctggatgatcagatgaccctcctgcagtgttcc
tggctgttcctcatgtccttcagtctaggctggaggtcgtaccagcagtgtaatggaaac
atgctgtgtttcgcaccagacctggtcatcaatgaagagagaatgaggttgccctacatg
actgatcagtgtgaacagatgctgaagatctccaatgagtttgtgagactgcaagtgtcc
aacgaggagtacctgtgcatgaaggtcctcctgctcctgagcacagtgccgaaggatggg
ttgaagagccagtcggtgttcgaggagctacggatgtcttacataaaagaactgggcaag
gccatcgtgaagagagaggagaactccagcaagaactggcaacgattctatcagctgact
aagctactggactccatgcacgacatggtgggcggactcctgaacttctgtttctacacc
tttgtgaataaatccctcagcgtggagttccccgaaatgctggcggagatcatcagcaac
cagttaccaaaattcaaagccgggagcgtcaagtcgctgctctttcaccagaagtga
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