Puntigrus tetrazona (Sumatra barb): 122357606
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Entry
122357606 CDS
T08985
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptet04121
]
122357606 (rlim)
Enzymes [BR:
ptet01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122357606 (rlim)
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122357606 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
SPT6_acidic
zf-RING_16
zf-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
122357606
NCBI-ProteinID:
XP_043112963
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All DBs
Position
14:5522299..5529661
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AA seq
634 aa
AA seq
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MEGQDNADQGSSDQSEIQRRRQLDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGEIT
ADELLSRLRQVKDGPESPSNGSTEERREGPAPTEMEGTEENPSGETLLDWLNTVRQTGNT
TRSGYRGNQSWRAVSQTNPNSGDFRFSLEINVNRNIAEQQTQTERLEGGQERPDGPVPEP
ESLMETAEVVEEPVVDELAVIVEPELPVPSTLSQSTEVIAPSPPTPAPPTLPPVEQPRRG
QIRARSRSPEQRRTRARTARGRSPLSLERLDGLPPAQHGLPSRNPDILPEPQVEGSSRTR
QLFLSRQSTVETETQESEAASELPGTPQEREAAAGEAGASGRRPPTIMLDLQVRRVRPGE
YRQRDSIANRTRSRSQTSNNTLLYETERGGFRRTFSRSERAGVRTYVSTIRIPIRRISDT
GLGEATSLALQSMIRQIMTGFGELSYFMDSDYPDSNREDSPAADLSDGLGNPDAPTGAAA
SEVDSYLPGNGGSNQGGLEARTEEREVDGGASGANSPRENRGRQRAPISLDETGSLPFLR
LAHFFLLNEEDDDQPRGLTKEQIDNLSMRNFGESDALKTCSVCITEYAEGNKLRKLPCSH
EYHVHCIDRWLSENSTCPICRRAVLVSTNRESVV
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcaggataatgcagatcagggcagcagcgatcaatcagaaatacaacgcaga
agacagctggaccgtctggacagagaagaggccttctaccagttcgtcaacaatctcagc
gaggaagactatcggctcatgagagacaacaatctgctcggcacccctggtgaaattacg
gcagatgaactgttaagccgccttcggcaggtcaaggatggccctgagtcgcctagcaat
ggctccactgaggagagaagggaagggcctgctccaacagagatggagggcactgaggaa
aaccccagtggggagacccttctcgactggctcaacactgtacgacagacggggaataca
acaaggagtggataccggggtaaccaatcatggcgggccgtgagccaaaccaatcccaac
agtggcgatttccgcttcagcttggagatcaatgtcaatcgcaacatagctgagcagcaa
acgcagacggaaaggctggaagggggccaagaaagaccagatggccctgtgcctgagccc
gagagtcttatggagactgcagaggtggttgaggaaccagttgtcgatgagttggcggtt
atagtagagccagagcttcccgttcctagcaccctgtcccaaagcacggaagttattgca
ccaagtccaccaactccagctcccccaactttgcccccagtagagcaaccacgtaggggt
caaattagagctcgcagtagaagcccagagcagcgacggacaagggctcgcaccgccaga
ggtcgctcgccactcagcctcgaaagattggacggacttcctcctgcccagcatggtctg
ccttctcgcaaccctgatatccttccagagccccaggtcgagggaagctcgcggactcgg
cagctgttcctgtctagacagagcactgtggaaacagaaactcaagaatcggaagcagct
tccgagttacctggaacaccgcaggagagggaggcagctgctggagaagcaggagcctcg
ggtcgtcgtcctccgactataatgctggacttgcaggtacgcagggtgcgtcccggagag
taccgccagagagacagcatcgctaaccgtactaggtctcgttcgcagacctccaacaac
actttactgtacgagactgagcgcgggggtttccggcggaccttctcccgatcggaacgg
gcaggagtcagaacgtacgtcagcactatccgcattcccattcgcaggatctcggacact
ggactcggggaggccacttctttggctctgcagtctatgatccgccagatcatgactggc
tttggtgaacttagctactttatggactcagactatcccgactcgaaccgtgaagacagt
ccagctgcagacctctcggatggactgggtaaccctgatgctcccaccggagccgctgca
agtgaagtggactcctaccttcctgggaacggaggctcgaaccaggggggattagaggca
cggacagaggagagggaagtggatggtggagcgtccggtgcgaacagtcctcgggagaac
cgaggcagacagcgggcgcccatcagcttggatgaaaccggctctctgccctttctgcga
ctcgcgcacttcttcttgctcaatgaggaagatgacgaccagcccagaggtctcaccaaa
gagcagatcgacaacctgtccatgcgaaacttcggtgagagcgacgcgctcaaaacctgt
agcgtctgcatcacagagtacgccgaaggcaacaaattacggaagctgccctgctctcac
gaataccatgtgcactgtattgaccgctggctctcggagaactccacctgccctatttgc
cgcagggcggttctggtttccaccaacagagagagtgtcgtctag
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