Puntigrus tetrazona (Sumatra barb): 122357697
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Entry
122357697 CDS
T08985
Symbol
cul4b
Name
(RefSeq) cullin-4B
KO
K10609
cullin 4
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03420
Nucleotide excision repair
ptet04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122357697 (cul4b)
09124 Replication and repair
03420 Nucleotide excision repair
122357697 (cul4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptet04121
]
122357697 (cul4b)
03400 DNA repair and recombination proteins [BR:
ptet03400
]
122357697 (cul4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptet04147
]
122357697 (cul4b)
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
122357697 (cul4b)
DNA repair and recombination proteins [BR:
ptet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
122357697 (cul4b)
TCR (transcription coupled repair) factors
Cul4-CSA complex
122357697 (cul4b)
Exosome [BR:
ptet04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122357697 (cul4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
NurA
DUF1908
DUF3292
Motif
Other DBs
NCBI-GeneID:
122357697
NCBI-ProteinID:
XP_043113133
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Position
14:21321674..21330975
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AA seq
862 aa
AA seq
DB search
MFPTGLPSPNPPPPAQEPRPAASDVHNDSSLTSSKKRKINSSEKEDIDSISSSPKAICNS
SSTTSSSSSSQQQQQHIQKKLRFEDPLDLIGLDVKMAEESCNSAESCSKTRNVFLPGGVG
HHANGLTKSAGSATFSNSKPGAAKKLVIKNFKEKPKLPENYTNETWQKLKEAVEAIQNST
SIKYNLEELYQAVENLCSHKISAKLYKQLRVVCEDHIKAQIDQFREDALDSVLFLKKIDK
CWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDLKVQSKTIDGIL
LLIERERSGEAVDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQEREVP
EYLHHVNKRLEEEADRVITYLDQSTQKSLIATVEKQLLGEHLTAILQKGLNNLLDENRIQ
DLSLLYQLFSRVKGGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIID
VCFMKNEKFVNGMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIM
IIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKD
MELSKDIMVQFKQHMQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPPEMVRLQEIFKTF
YLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEDIKLAT
GIEDGELRRTLQSLACGKARVLTKTPKSKDVEDGDKFSCNDDFKHKLFRIKINQIQMKET
VEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIE
SLIDRDYMERDKENPNQYNYVA
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaacaggtttaccttcccctaatcccccaccgccagcccaagagcccagaccg
gcagcttctgatgttcacaacgacagtagcttaacgtcttctaagaagaggaaaattaac
agttcagagaaggaagacattgattcaatatcttcgtctcctaaagccatttgtaattcc
tcctcaacaacgtccagctcttccagttcacagcagcagcagcagcacatccagaagaag
ttgaggttcgaagatccgctggatttgatcggactggatgtgaagatggccgaggagtcg
tgtaactctgctgaatcgtgttcaaagacgagaaatgtgttcctgcctggaggtgtcggg
catcatgctaacggactgaccaagtctgcgggatccgccaccttctccaacagtaaaccc
ggtgctgcaaagaaacttgttatcaagaactttaaagaaaagccaaaattaccagagaat
tatacgaatgagacctggcagaagctgaaggaggcagtagaggccatacaaaacagcact
tcaataaagtacaatctagaggagctctatcaggctgttgaaaatttgtgctctcataag
atatctgccaagctctataaacagctcagagtggtctgtgaagaccatatcaaggcacag
attgaccagttcagggaggatgccctagacagcgttctgttcctcaagaaaatagataaa
tgttggcaagatcactgcagacaaatgatcatgattaggagtatttttctgtttttggat
cgcacatatgttttacaaaattcaatgctgccatcaatctgggacatgggcttggagttg
tttcgtttctatatcatcagcgacctgaaggtgcagagtaagacaatcgatgggatactg
cttcttattgaaagagagcggagtggagaggccgtagaccgcagtctcctgaggagtctt
ttgagcatgctctcagatctgcagatttatcaggattcattcgagcagcgctttctggag
gagacaaatcgactgtatgctgcagagggccagagactcatgcaggaaagagaggtgcca
gagtatctccatcatgtcaacaaacgtctggaagaggaagcagatagagtcattacatac
ttagaccagagcacacaaaaatcccttattgccacagtagaaaagcagctgcttggagag
cacctcactgcaatacttcagaaaggtttgaataacctgctggatgagaaccgtattcaa
gacctgtctctgctgtaccagctcttcagtcgtgtgaagggaggcgtgcaggtgcttctg
cagcactggatcgagtacatcaaggcctttggaagcacaatcgtcatcaacccagagaaa
gacaagacaatggttcaagagcttttggatttcaaggataaagtcgatcacatcattgat
gtgtgtttcatgaagaatgagaagtttgttaatggcatgaaggaggctttcgagaccttt
atcaataaacggccaaacaaacctgctgagctcatagcaaaatatgtggattcaaagctc
cgtgctgggaataaagaagcgactgatgaggaacttgagaaaatgttggacaagataatg
atcatattcaggttcatttatggcaaagatgtttttgaggccttctacaagaaagacttg
gcaaagaggttactggtgggaaagagtgcctctgtagacgcagagaaatcaatgctgtca
aaactaaagcatgaatgtggtgctgcatttaccagtaagcttgaagggatgttcaaagat
atggagctgtcaaaagatattatggtgcaattcaaacagcacatgcaatgccaaaatatt
cctgggaacattgagctgacagtgaacatcctcactatgggttattggccaacatatgta
cccatggaagtacatctgcctccagagatggtgagattgcaggagattttcaaaacgttt
tacctgggcaaacacagtggacgaaaacttcagtggcagtctacgttaggacattgtgtt
ttaaaggcagaatttaaagagggcaaaaaagagctgcaggtatccctgtttcagacgtta
gttctgctgatgtttaatgaaggagaggagttctctctggaggatattaaacttgctaca
ggcattgaggatggtgagctcaggcggactctacagtcactggcctgtgggaaggcgcgt
gtccttaccaaaaccccaaagagtaaagacgtggaggatggagacaagttctcttgtaat
gatgatttcaaacacaaactcttcaggattaaaatcaaccagattcagatgaaagaaacg
gtggaggagcaagccagcactacagaaagagtattccaggaccgccagtaccaaatcgat
gctgccattgttcgaatcatgaagatgaggaaaactctcagccataaccttctggtgtct
gaagtgtacaaccaacttaaattcccagtcaagcctgctgatctgaagaagaggatagag
tcacttattgacagggactacatggaaagggataaggaaaatcccaatcaatacaactac
gtggcttag
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