Puntigrus tetrazona (Sumatra barb): 122357700
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Entry
122357700 CDS
T08985
Symbol
pcdh20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
122357700 (pcdh20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ptet01009
]
122357700 (pcdh20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ptet04515
]
122357700 (pcdh20)
Protein phosphatases and associated proteins [BR:
ptet01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122357700 (pcdh20)
Cell adhesion molecules [BR:
ptet04515
]
Cadherins
Protocadherins
122357700 (pcdh20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Tetraspanin
Motif
Other DBs
NCBI-GeneID:
122357700
NCBI-ProteinID:
XP_043113138
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All DBs
Position
14:complement(4781625..4787146)
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AA seq
862 aa
AA seq
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MRLRPPNAFRQSASHAHRAQHVLEEWTAQHHHIMNHAILQWVLLLAFAEQIHSRTLHFTI
PEEQEAGVKIGSLSTTYLAPYRLLDERYIRVDESTGDLFTKERIDRETLCPSHQDGDCVF
SDTAVVSIDHEVVPILILVDDINDNAPVFERNVIPLHIPEDASIGTAFPLDDQAQDKDTG
DNGAIRYYLEDSGGFFNIRQDRHELELVVQRQLDRETRENHLLVLVAADGGSVPLSATAN
LNVTVTDVDDNCPEFDADSPTAAIVPALGVKGTVVAQLKATDKDLGQNAQITFSFSRQIS
DRAKVLFHMHGHTGLISLAVDTQLDSPEEHTLKVFANSPLCPPAQTQVTVYMQPAMSPEP
SLKIKFVAEHKNRAIVLQENEPPTVLALLELEDTSKGTLSLDKDSVPFSLKPQAGSYLLS
TSKPLDFEMCGEYEVTVIISDPHDTRLHRREVIKVLVEDVNDNAPKFEQARYETDIRENN
EPGAFLLRVQASDADSHQFGKVRYRLTNGGPFTIDEERGVISVVESLDRELQETYVLTVL
ARDGGEPSQEGFANVVVNILDLNDNPPAFPTPHFYFFVSESIPQLSQVGKVSVSDSDKGE
NGRIADVRILNDEVPFAIDLLQGSLRSIGEVDREKQDRYELLVVAVDGGSPVLSATARMT
IFIEDVNDNQPQVLLPSSNLSCLTISPATRAGSMITKIYAIDEDSGMNSDITYQIIATKP
ALESPFQIDQQSGNITLVQHLRGEDHGMHHLFIVVRDGGRPGPLQTAVWVNLLVNETLEK
CQVNAVPDYSPPRLPPPMPVRDRRCESNAWLVFYCGLCLMAISVCVLLAVVVVFMKRRKT
KRKVEKKNVWETGNLCEMKPLN
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaggctccgccccccaaacgcatttcgccagagtgcttctcacgctcacagagctcaa
catgttcttgaagaatggacagctcaacaccaccacataatgaaccacgccatactacag
tgggtgcttcttctggcatttgctgagcaaatccatagccgtactctgcatttcaccatc
ccggaggagcaagaagcaggcgttaagatcggaagcctgagcacgacctacttagctcca
taccggctcctcgatgaaagatacatcagggtggatgagagcacaggggatctgtttact
aaagagcgcatagacagagagaccttgtgtccatcgcatcaggatggggactgtgttttt
tcagatacagcggtcgtgagcattgatcatgaagttgtgccaatactaatccttgtagat
gatattaatgacaacgctcctgttttcgagaggaatgtgattcctctgcacatacctgaa
gatgcatcaatcgggactgctttcccactggatgaccaagcccaggataaggatacgggc
gataatggagcgatacgttactatttggaagactctggtggcttttttaacatcagacaa
gacaggcatgaactcgagctggtggtacaaaggcaactggaccgggaaactcgggaaaac
cacctcttggttcttgtagcagcagacggaggttcagtcccactcagtgcgacagctaat
ctcaatgtaactgtaaccgacgttgatgacaactgcccagagtttgacgccgacagtccc
accgcagccattgtgcctgcattaggagtcaagggcactgtggtggcccagcttaaagcc
acagacaaagacctgggccaaaatgcacagatcacattctccttcagccgtcagatctcc
gacagggccaaagtgctctttcacatgcatggacacacaggcctgatcagcttagctgtt
gacacgcagcttgacagtcccgaggagcacacgttgaaagtctttgcgaatagcccactt
tgcccccctgcgcaaactcaggtaaccgtatacatgcagccagcgatgagcccagagccg
tccctaaagatcaagtttgtcgcagagcacaaaaaccgagcgatcgtgttacaagaaaac
gagccccccactgtcttggccctcttggagctggaagacacctctaaaggtactctgtcc
ttagacaaagacagtgtgccgttttctttgaagccgcaagcaggcagctatttgctttca
acatcaaaacccctagattttgagatgtgcggcgagtatgaggttacagttattatttct
gatcctcacgacacacgcctacacagaagagaagtaatcaaagtgctggttgaagatgtg
aatgataatgccccgaagtttgaacaagcgcgttacgaaacggacatcagggaaaacaac
gagcctggagcgtttctgctgagggtccaggccagcgacgctgacagccaccagttcggc
aaagtaaggtacaggcttacaaatggaggacctttcacaattgacgaagagaggggtgtg
atatcggtggtggagtcgttggatagagaactgcaggagacatacgtcctgaccgttttg
gcccgggacggcggcgaaccgtctcaggagggcttcgctaatgtggtcgtaaatatactg
gatctgaatgacaatccaccggcttttcctactccgcatttctatttcttcgtgtctgag
agcattccgcaactttcccaagttgggaaagtctcagtgagtgatagtgataaaggagag
aacggccggatagcggatgtgcgtattttaaacgacgaggtcccttttgccatagacctg
ttgcagggatcgctccgcagtattggtgaagttgaccgcgagaagcaggaccgctatgag
cttctggtagtggctgtagacggcggcagcccggtcctttcagctacagcaagaatgacc
attttcattgaggatgtcaatgataatcaaccccaggtccttcttcccagcagcaacctc
tcctgtctgaccatatccccggctactcgagcaggaagcatgataacaaagatttacgcc
atcgatgaggactccggaatgaattcggacatcacttaccaaattattgcaactaaacca
gctctagagagccctttccagattgaccagcagtccggaaacattactctggtccagcat
ttgcgtggtgaggaccacggcatgcaccacctcttcatagtggttcgcgacggaggaagg
ccaggaccgctgcagaccgccgtgtgggtcaatctgctggtcaacgagacactggagaaa
tgtcaagttaatgccgttccagattattctccaccacgactgcctcctccaatgcccgtc
agagatcgcaggtgtgaatcaaatgcctggcttgttttttattgtggcctgtgtctgatg
gccatctcagtctgcgttctcctggctgtcgtagtggtgtttatgaagcgcagaaaaacc
aaaaggaaagtcgaaaaaaagaatgtatgggaaaccgggaatctctgtgaaatgaaacct
ttgaactaa
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