Puntigrus tetrazona (Sumatra barb): 122357778
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Entry
122357778 CDS
T08985
Symbol
abca1b
Name
(RefSeq) phospholipid-transporting ATPase ABCA1b
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet02010
ABC transporters
ptet04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122357778 (abca1b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122357778 (abca1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptet02000
]
122357778 (abca1b)
Transporters [BR:
ptet02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
122357778 (abca1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
MukB
Motif
Other DBs
NCBI-GeneID:
122357778
NCBI-ProteinID:
XP_043113282
LinkDB
All DBs
Position
14:complement(11564116..11594242)
Genome browser
AA seq
2282 aa
AA seq
DB search
MSVSTQLGLLLWKNFTYRRRQTLQLLTEIVWPLFIFFILIAVRLNYPPYEQHECHFPNKA
MPSAGTLPWIQGIVCNANNPCFRHSTPGESPGVVGNFNDSIISRLFSDAKKILLYSQNDK
SLDGFKELISAVKVMQKNTAGFKLKDFLRENETLSTFLKQNASFSQNYVHNILEADVNFE
KVLLRGFGVHLRDMCSSTTLEDFVSIPDKRVARLTQEIICSAPNSWLDQAERHFKSNLDF
LKPIRSEIRTNATDVQLVAKATDNLLESLGSLAVELASMRSWSDLRNEILFLTENATGSP
GLMYQAVSRIVCGHPEGGGLKIKSLNWYEDSNFQALFGSHNDSDDEPVSVYDNTTTPYCN
NLMKNMEASPISRMIWRALKPLLMGKILYTPHSPATQKIIHEVNKTFQELGILRDLGGMW
EEARPKVWNFMENSEEIDLMRTLLRNNATASFFSAQLAGTQWSVEDVISFLSKHSEDTRP
HGTAFTWRDVFNETDQAIMSISRFMECVNLDKLEPVSTEEKMVNESMGLLDNRKFWAGIV
FLDIQSNSSELPPHVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFTYLQ
DVIEHSIIRAVTGTKEKTGVYIQQMPYPCYVDDIFLRIMSRSMPLFMTLAWMYSVAIIIK
GVVYEKEARLKETMRIMGLDNGILWFSWFISSLFPLLISAGLLVLLLKMGNLLPYSDPGV
VFLFLGSFAVVTIMQCFLISTAFARANLAAACGGIIYFTLYLPYVLCVAWQDYVGFSAKV
IASLLSPVAFGFGCEYFALFEEQGVGIQWNNLFSSPMEEDNYNLTTCLILMYFDAFLYGV
MTWYIEAVFPGQYGIPRPWYFPFTKSYWFGESNTNNTAVHGKKGNAGAVCIEEEPTHLEL
GVYIKNLVKVYRHGKKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTA
YIMGKDIRSELSSIRRSLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEEDVKAEMEQILT
DTGLPHKRKSRTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLLKY
RTGRTILLSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKKNTEPS
LSSCRNSSSTVSFVKKDDNASESSSDAGLGSDQESEAATAIGNTWPESPVVPVDVALISS
LILKHVPASRMVEDLGHEITYVLPYESAKDGAFVELFHDLDDRLAYLGISSYGISDTTLE
EIFLKVAEDSGVDTEIISDGTLPVPRHRRHAFGADHQSCLKPLTEDDSFDCNDSEGDPES
KETDYLSVSNGKGSYQVKGWSLKRQQFVALLWKRLLYARRSRKGFFAQIVLPAVFVCIAL
VFSLIVPPFGKYPSLALNPWMYEEQFTFISDDAPHDISTQKLLNALLDDPGFGTRCMEGE
PISDAPCTMGDEEWSIPEVAESVIDIFMSTNWTMDNPSPACECSCNGKKKMLPECPAGAG
GLPPPQIKMSESETLQNLTGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGARST
QVIPPAEEIDDAIHRVREIFQLEKDSGSAADRFLKSLSAFINGLDTKNNVKIWFNNKGWH
SIGAFLNVMNNGILRANLPPGKDPRQFGITAFNHPLNLTKEQLSQVALMTTSVDVLVSIC
VIFAMSFVPASFVVFLIQERVNKAKHMQFISGVQPYLYWLANFLWDMCNYVVPATLVILI
FVCFQQKAYVSATNLPVLALLLLLYGWSITPLMYPASFLFKIPSTAYVVLTSVNILIGIN
GSVSTFVMELFGNNEIGGINDILKNVLLIFPHFCLGRGLIDMVKNQAMADALERFGENRF
RSPLEWDMVGKNLFAMAVEGVVFFIITVLIQYRFFFEPKSLSAKLSPIGEEDEDVARERQ
RIMNGAGQGDILELRQLTKVYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLT
GDSVVTKGEAFLAGKSILREIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKE
VCEVAEWGIRKLGLVKYVDKNAGSYSGGNMRKLSTAISLIGAPPVVFLDEPTTGMDPKAR
RALWNCIHSVIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYT
IILRVAGPDPDLQPVMKFIESELPGSTLKEKHRNMLQYQLPSSLTSLAHIFSILAKNKEF
LRIEDYSVSQTTLDQVFVNFAKDQSDDHSDSSIRRKDTAVNMALLSPLSVKENMEKPIES
FV
NT seq
6849 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtctccactcagctgggtctgctgttgtggaagaacttcacctacagaaggaga
caaacgctccaactgctgacagagattgtgtggcctctctttattttcttcatcctgatt
gctgtgaggttgaactacccgccttatgagcaacatgaatgtcactttcccaacaaagcc
atgccctcagcaggcaccctgccctggatccagggcatcgtctgcaatgccaacaatccc
tgcttccgacactcaacccctggggaatctccaggagtcgtcggaaatttcaacgattcc
ataatctcacgcctgttttctgatgccaagaagatcttactgtacagtcaaaatgacaag
agcttagatggattcaaggagcttatcagtgcagtgaaagtcatgcagaaaaacacagct
ggtttcaagctgaaggacttcctgcgtgaaaacgaaaccctttccacgttcctcaagcaa
aatgcctccttttcccaaaattatgtgcacaatattttggaagctgatgtgaattttgaa
aaggtgctgctcagaggttttggtgtccatctgagagacatgtgcagctccaccacactt
gaggattttgtaagtatcccagacaaaagggtggcgagattaacccaggagatcatctgc
agtgctcccaatagctggttagaccaggccgagagacacttcaagtccaacttggatttc
ctcaaacctattaggtcagaaataaggactaatgcaaccgatgtccaactagttgccaaa
gctacagacaaccttttggagagcctgggatcactggctgtggagctggccagtatgagg
agctggagtgacctgcgaaacgagatcctgtttctgacggaaaacgccaccggctcgccc
ggtctgatgtaccaggctgtgtcccgtatcgtgtgtggacacccagaaggtggtggcctt
aagatcaaatccctcaactggtatgaggacagcaacttccaggcactgttcggcagccac
aatgacagtgatgacgaaccagtttcagtctatgacaacaccaccactccatactgtaac
aacttgatgaagaacatggaagccagtcccatctctcgaatgatttggagagcactgaaa
cctctcttgatggggaagatcctctacacgccacacagccctgcaacacagaagatcatt
catgaggtcaacaagacatttcaggagcttggaattctgcgagatttaggcggaatgtgg
gaagaagccaggcccaaggtttggaacttcatggagaacagtgaagaaattgacctgatg
cggacgcttcttcgaaacaatgccactgctagtttcttcagtgcccagttggctgggact
cagtggagcgtggaggacgttataagctttttgtctaagcactccgaagacacacgtccc
catggaacggcatttacatggcgtgatgtcttcaatgaaacagatcaagccattatgagc
atatcccgtttcatggagtgtgtaaacctggataaacttgaacctgtaagcacagaggag
aaaatggtgaacgagtctatgggtctcctggataacagaaagttttgggcgggaattgtg
tttctagacattcaatccaacagctctgaacttccccctcacgtcaactacaagatccgc
atggacatcgacaatgtggagcgcacaaacaagatcaaagatgggtattgggatccgggt
cccagggctgatccgtttgaggatttgcggtatatttggggaggatttacttaccttcag
gatgtaattgaacacagcatcatcagagcagttactgggaccaaagagaagactggtgtt
tacattcaacagatgccttatccatgttatgtagatgatattttccttcgcattatgagc
cgttccatgccacttttcatgactctggcctggatgtactcagtggccatcatcattaaa
ggtgtcgtctatgagaaggaggcccggctcaaggagaccatgaggattatgggattggac
aatggaatcctgtggttcagttggttcataagcagcctcttccctcttctcatcagcgca
ggcctgctggttcttctactcaagatgggtaacctcctgccctatagtgaccctggagta
gtcttcctcttcctcgggtcattcgctgtggtgaccatcatgcagtgttttctgatcagt
acggcgtttgcacgtgctaacctggcagcggcttgcgggggcattatctacttcaccctc
tacctgccttatgtgctctgtgtggcttggcaagactacgtgggcttcagcgccaaagtt
attgctagcttactgtctccagtggcgtttggatttggctgtgagtattttgccctgttt
gaggagcagggtgtaggcatccaatggaataacctcttctccagccccatggaagaagac
aactacaacctcactacctgtctcatcctcatgtactttgatgccttcctttatggagtc
atgacgtggtacattgaagctgtgttcccagggcagtatggcatccccaggccatggtac
tttcctttcactaaatcctactggtttggagagagcaacacaaacaatactgcagttcat
ggaaagaagggcaatgctggggctgtctgcattgaagaggaacccactcaccttgaattg
ggagtttacattaagaatcttgtaaaggtttaccgtcatggcaaaaagctagcagtcgat
ggattgacacttggtttctacgaggggcaaataacgtccttcctaggtcacaatggagct
ggaaaaaccaccaccatgtccatccttactggtctatttcctcccacctctggcactgca
tatatcatgggcaaagatatccgctcagagctcagttccatcagacggagcctcggagta
tgtccacaacacaacgtcctcttcagcatgttgactgtagaagagcatatttggttctac
gcccgtctgaaaggtctgtctgaggaggacgtaaaggctgagatggagcagattctgact
gacaccggccttccacacaaacgcaaatctaggaccagccagctatcaggtggtatgcag
aggaaactctcagtagcgcttgcttttgttggagggtcaaaggttgttattctagacgag
cccacggctggagtggacccatacgctcgaagaggcatctgggaccttcttctgaagtat
cgcacaggtcggactatccttctttccacccatcatatggatgaagcggatattctggga
gatcgtattgctatcatttcccacggaaagctttgttgtgtgggctcttcgctctttctt
aagactcaactgggaactggatactatcttaccttggtgaagaaaaacactgagccttct
cttagctcttgcaggaactcgagcagcacagtgtcctttgttaaaaaagatgacaatgca
tccgagagcagttcggatgctggtctaggtagtgatcaagagagcgaagccgccacagcg
attggaaatacatggcccgaatctcctgttgttcctgttgatgtagccctcatttccagt
ctaatcttgaagcacgttcccgcttctcgcatggtggaagacctcggacatgagatcaca
tatgtgttgccttatgagtctgccaaagatggtgctttcgttgagctcttccatgatctg
gatgatcggctcgcttaccttggcatttcgagctatggtatctcagatactacactcgaa
gagattttccttaaagtggcagaggacagtggagttgacactgaaatcatctcagatgga
actttgcctgtgcctagacatagacgacatgcatttggtgctgaccatcagagctgcctc
aaacccctgaccgaagatgatagctttgactgcaatgattctgaaggtgatccagaatcc
aaagagacagactacttgagcgtttccaatgggaaaggatcatatcaggtgaaaggctgg
agtttgaagaggcagcagtttgtggctttactgtggaagagattgctttatgctcgccgc
tcaaggaaaggcttctttgcacagattgttcttcctgctgtgtttgtgtgtatcgctctg
gtattcagtcttattgtcccaccattcggaaaatatcccagcctggctctcaatccctgg
atgtatgaagaacagtttacattcatcagtgatgatgccccacatgacataagcacacaa
aaattactcaacgctttattagatgatcctggctttggaactcgatgcatggaaggagaa
ccaatttctgatgctccttgtacaatgggagatgaggaatggtctataccagaagtggca
gaaagcgtgatagacattttcatgtcaacaaactggaccatggacaacccatcgcctgct
tgcgagtgcagctgtaatggcaaaaaaaagatgctcccagaatgccctgctggtgcaggt
ggactgccacctcctcagattaaaatgagtgaaagtgagactctccagaacctgacggga
cgaaacatatcagactatcttgtgaaaacctatgcacagatcattgggaaaagcttaaag
aacaagatatgggtgaacgaattcagatatggaggattttcattgggagctagaagcacc
caggtaattcctcctgctgaagagatcgatgatgccatccatagagtcagggaaatcttc
caactggagaaggactcaggatcagcagctgaccgtttcttgaaaagcctgtcagccttt
atcaatgggttggacactaagaataatgtcaagatatggttcaataacaagggctggcac
agtattggagccttcctcaatgtaatgaacaatggtatcttgcgtgccaacttaccacct
ggcaaagacccccgtcagtttggcatcactgcgtttaaccatccgctcaatctgaccaag
gaacagctttctcaagtggccctaatgaccacctcagtggacgtgctggtttccatctgt
gtgatcttcgccatgtccttcgtccctgccagcttcgttgtcttcctcattcaggagcga
gtaaataaggccaagcacatgcagtttatcagtggagtgcagccatacctctactggctg
gccaactttctctgggatatgtgcaattatgttgttcctgctactctggttatcctgatc
tttgtgtgctttcaacaaaaagcctacgtctctgcaaccaacctgcctgttcttgccctt
cttctgcttctgtatggatggtccatcactcctcttatgtacccggcttcattcctcttc
aaaatccccagcacagcttacgtggtgctcactagtgttaatattctcattgggatcaat
ggcagcgtgtccacttttgtcatggagttatttggaaataatgagattggtggaattaat
gacatcctgaagaacgttttgctcatcttcccacatttctgcctgggtcgaggtctcatt
gacatggtgaagaatcaggccatggctgatgctctggagagatttggtgagaaccgtttc
cgttctccattggagtgggacatggtgggcaagaatctttttgctatggctgtggaagga
gtggttttcttcatcatcactgtcctcatccagtaccgtttcttctttgaacccaagtct
ttaagtgccaagttgagtccgatcggagaggaggatgaagatgtggccagagagaggcag
aggatcatgaatggagctggacagggagacattcttgaactcagacagctcactaaggtt
tacaagcggaaacagaagcctgccgtcgatcgtctgtgtgttgggattcctccaggagag
tgttttggtctgcttggtgtcaacggagccggaaagacaagtacttttaaaatgctgact
ggagactctgtggtgaccaaaggagaagctttcctagctgggaaaagtatactcagagaa
atagatgaagtacatcagaacatgggctactgccctcagtttgatgccatcaatgatctt
ctgacaggacgggaacacctggagttctatgccatcctgcgtggtgtacccgagaaggaa
gtttgtgaggttgcagagtggggaatccgtaaactggggctcgtgaagtacgtggacaag
aatgcaggaagctacagcggcggcaacatgcgcaaactctccaccgccatatcactcatt
ggagccccaccagtggtcttcctggacgagcccaccactggaatggaccccaaagcacgc
cgagcactgtggaactgtatccacagcgtcatcaaagagggacgctcggtcgtacttacc
tcacacagtatggaggaatgtgaagcgctgtgcaccaggatggccatcatggtgaacggc
aggttccgctgtctgggtagcgtccagcacctgaagaacagatttggtgatgggtacacc
atcattctgagggttgcagggcctgatcctgacctgcagccagtgatgaagttcattgag
agcgaactaccaggaagcaccctgaaggaaaaacacagaaacatgctgcaataccagctc
ccctcctccctcacctccctcgctcacatctttagcatcctcgctaagaacaaagagttt
ctcagaatagaggactactctgtgtcccagaccactctggaccaggtatttgttaacttt
gccaaggaccaaagtgacgaccactcagacagctccattcgtcgtaaagacactgcggtc
aacatggccctcctgagccctctgtctgttaaagagaacatggagaagccaattgaaagt
tttgtgtga
DBGET
integrated database retrieval system
