Puntigrus tetrazona (Sumatra barb): 122358036
Help
Entry
122358036 CDS
T08985
Symbol
aff2
Name
(RefSeq) LOW QUALITY PROTEIN: AF4/FMR2 family member 2
KO
K15194
AF4/FMR2 family member 2
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptet03021
]
122358036 (aff2)
Transcription machinery [BR:
ptet03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
122358036 (aff2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
122358036
NCBI-ProteinID:
XP_043113707
LinkDB
All DBs
Position
14:complement(1029027..1222531)
Genome browser
AA seq
1268 aa
AA seq
DB search
MDLFEFDFFRDWELEQQCHYEQDRWRWKKKEGAKDTEVQQMRLVLYRFNLFGELHKTNKG
DALANRVQNTLGNYDEMKELLTSHSNQSHLVGIPKNSVPQTPVEKPDQPGFFPEAQRSRA
PPSQPGSHNTSMPPPPANTMPGSSVVHGHQGKKSRSSDWSRGGHGSSGAQTAQTVSRGKH
SSHEQTSSRHDQDQEDSSPNPSGPTTSSHSNRKQAQPGKGPATAELGLGKSPADQDLCSH
GSNSPMASTSLLPSGASTPTFPQGLHCKPSSAVQQKPTAYVRPMDGQDQVPNDSPELKPP
VELVEGYNSVPFGGLLDTKSSTAGTKGKIPKLTLPQSGEVSLPNDSNCVEEILREMTHSW
PPPLTAIHTPGKAEQTKFPIPSKDSQHVTSGYNGKRCNISSNKPATKSVPQKSMLEDDLK
ISSDEEDNEQAAEKPKPRSAPLNLPGTTPRTGEPTGHSSGASGSSSESESSSESDSDSES
SSSDSECNRASRAATPEPEPPSTNKWQLDKWLNKVNPHNKALINTQSDSHGLNSSQPDES
QASDTQSSSKSKTSTALAPAEPKERTLLSPIREKAKPKTGQKAPDSKSTKVKSPASVELA
PPRRSTGKKQPKKVERSSSSEEHSWPRPGNSSSTPKEKEPPPLEPPKPRGKGPGVKTAPR
KEPRTTTTNNAPMNITPVQDKKKHRGPNKIIPKSKEFIETESSSSECHSDPEELTKVQLP
CPGPNTLSLKSKDCNSNILSVSSLTSTSSTSIPDPGASDLLEEPLFSPIPIVQNELLSPL
RDFEDIKSLWVKIELSFLSRIPGQEPPEPPPTKAECREVSVKHRRQQSPASIPAEKNPSK
SKRKHKSEHCDVMSGGKKLRMDKDALLLPPCISPIHNHKVSSTKDSLKKQPRKREDKLLP
PLLSPLSDEPVGRPRRSSECSSLSQEGNTSTVPNTLPSTRTIPASTSSSSSSSHKHRKGE
NKSFSHSKTSSEEDSHSKPSGGFHGNGQSEPDLWSNTSALSMEHMEPRRPKLTFNNTVHN
ADYYMQEAKKLKHKADALMDKFGKAVNYADGALSFIECGNAMERDPLEAKSPYTMYSETV
ELIRYAMRLKNFTSHSATIAEKKLAVLCNRCLSLLYLRMFKLKKDHAMKYSRSLMEYFKN
SAKSSQAPSPWGANGKSTGTPSPMSLSPSPVSSVSSGAGVMGSSSASGSVAIPQRIHHMA
ASHVNITNNILRSYEHWETADKLAQESQEFFLELDSVMEPLTQHSSMTELVRYIRQGLHW
LRLEAHLL
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atggacctattcgagtttgacttcttcagggactgggagctggagcagcagtgtcattac
gagcaggaccgctggcgctggaagaagaaggagggagcgaaggacacagaagtgcagcag
atgcgacttgttctctaccgatttaatctgtttggtgagctgcataagactaacaaagga
gatgccctggccaaccgggttcaaaacacacttggaaattatgatgaaatgaaggagctc
ctgactagccattccaaccagagtcaccttgtgggcattcctaagaactctgttccccag
actccagtggagaaacctgaccagccaggctttttccctgaggcacagcggagccgagct
cctccctcccaacctggaagccacaacacctccatgcccccaccccccgccaacaccatg
ccgggctcaagtgttgtacatggacatcaaggcaaaaagtctcgctcttcagactggtcc
cgagggggtcatggttcaagtggcgcccagactgctcaaacggtcagccggggaaagcac
tccagtcatgagcagacctctagtagacatgatcaggaccaagaggactcaagtcctaat
cctagcggacctacaacttcatcacactccaacaggaagcaggcacagcctggaaaagga
ccagccacagccgagcttggcctcggaaagtctcccgccgatcaggacttgtgctcccat
ggctcaaactcaccaatggcctctacatccctgctccctagcggcgcctcgacgccaact
ttcccccaaggcctccactgcaagcccagcagcgctgtgcagcagaaacccactgcctac
gtcaggcccatggacggccaagaccaggtccccaatgattccccagagctcaaaccccct
gtggagctggtggaaggatacaacagtgtgccattcggaggtctgctggataccaaaagc
agcacggctgggaccaagggcaaaattcctaagctgacactgccacaatccggagaggtc
agcctgcccaacgactccaattgtgtggaggaaattctgcgggagatgacccactcctgg
cctcctcctctcactgccatccacacaccaggcaaagctgaacaaaccaagtttcccatc
ccttcaaaggattcccagcatgtgacctcaggatacaacgggaaacgctgcaatatttcc
agtaacaagcctgcaaccaagtcggtaccgcagaagtcaatgcttgaagatgacctgaaa
attagcagcgacgaagaggacaacgaacaggccgccgagaagcccaagcccaggagcgct
cctctcaacctccctggaaccacaccacggaccggcgaaccaactggtcactccagcggg
gcctcgggcagctccagcgaatcagaaagcagttcagagtccgactcggacagcgagagc
agttccagtgacagtgagtgcaaccgagcatcccgcgctgctacaccagagcctgaacct
ccgtcaacgaacaagtggcaactagataagtggctaaacaaagttaatcctcacaataaa
gcactaattaacacccaatcagatagtcatgggcttaatagttctcaacctgatgaaagc
caagcctcagacacccagagctccagcaagagcaagaccagcacagcactggcaccagca
gaacccaaggaaagaacgttgctcagtcctatccgagagaaagccaaacccaagactggt
cagaaggctccagacagcaaaagcaccaaggtaaaatcaccagcctcagtggagcttgca
ccccccaggagaagcactggaaagaagcagcccaaaaaggtggagcgatcttccagcagt
gaggagcacagctggccaagaccaggaaactcaagttcaaccccaaaagagaaagagccc
ccgcctttagaacctccaaaacctagaggcaagggcccaggggtcaagacggctccaaga
aaggaacctcggaccaccacgacaaacaacgcaccaatgaatatcactccagttcaggat
aaaaagaagcaccgaggacccaacaagatcatccccaagtctaaggagttcatcgagaca
gagtcttcttcatccgagtgtcattcggacccggaggagctcactaaagttcagcttcct
tgtcccggtcccaacaccttaagcctgaaatccaaggattgcaacagcaatatcttgagt
gttagcagccttaccagcacaagcagcacctctattcctgatccaggtgcctcggatctc
ctcgaagagcccctgttttctcctatccccattgtacaaaatgaacttttgtcaccacta
agagattttgaggacatcaagtctctttgggttaagattgaactcagcttcctatcacga
atcccagggcaagaacccccggagcctcccccaaccaaggccgagtgtcgggaggtcagt
gttaagcacagacggcaacagtcacctgcctctatccctgcagaaaagaaccctagtaaa
tccaaaaggaaacacaagtctgagcactgtgacgtgatgagtggaggcaagaagcttcgg
atggacaaagacgctctgctgcttcctccttgtatctcgcccatacacaaccacaaggtc
tccagcacaaaagattctttaaagaagcagcctcgcaagcgggaggataagctgttaccg
cctctgctgtcgcctctgtccgatgagccggtgggccgcccgcggaggagcagcgaatgc
agctcgctcagtcaggagggaaacacctccaccgtcccaaacaccctcccctccacccgc
acaatacctgcctccacctcttcatcatcgtcctcgtcacacaaacaccgcaaaggagag
aacaaatccttctcccattccaagaccagctctgaggaagacagccacagcaagccttcc
ggcggttttcacggcaatggtcagtcagagccagacctctggtcaaacacttcggccctg
tccatggagcacatggagcccaggagacctaaactcacatttaataacacagttcacaat
gcagattactacatgcaggaagccaagaagttgaagcacaaggcagacgctttgatggat
aagtttggcaaagctgtgaattacgccgacggggcgctctcgtttatcgaatgcggtaac
gccatggaacgggacccgttagaggccaagtcaccgtacacaatgtattcagaaaccgta
gagctcatcaggtatgcaatgagattaaagaacttcaccagtcattccgccacgatagct
gagaagaagcttgctgtactgtgcaatcgttgtttgtcacttctgtacttgcgaatgttc
aagctgaagaaggatcacgcgatgaagtattcccgctcactaatggagtatttcaagaat
tccgcgaaaagttcccaagcaccttcgccgtggggcgccaatggaaagagcacaggtacc
ccttctcccatgtccctgagtccatctcctgtcagctcggtcagcagcggcgctggagtg
atgggctcttcctctgcctctggaagcgtggccattccccagcgcatccaccacatggca
gccagtcatgtcaacatcaccaacaacatcctgcgcagctatgaacactgggaaaccgct
gacaagctggcccaggaaagtcaagagttctttctggagctggactcagtgatggaaccg
ttgacgcagcacagcagcatgacagaactggtgcgctacatacgccaaggattgcactgg
cttcggctggaggcccatttgttatag
DBGET
integrated database retrieval system
