Puntigrus tetrazona (Sumatra barb): 122358061
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Entry
122358061 CDS
T08985
Symbol
khdc4
Name
(RefSeq) KH homology domain-containing protein 4 isoform X1
KO
K25780
kelch domain-containing protein 4
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptet03041
]
122358061 (khdc4)
Spliceosome [BR:
ptet03041
]
Complex B
Other components
Prp19-related factors
122358061 (khdc4)
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Ortholog
Paralog
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
KH_12
DUF7104
Motif
Other DBs
NCBI-GeneID:
122358061
NCBI-ProteinID:
XP_043113741
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Position
14:26374333..26383784
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AA seq
623 aa
AA seq
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MITFVTGFVTRSCACAAAAEVTQRAAFPLAGLSAGASETDRFGSVHRNQKHKRISRQMSF
GVPHGGGRRSKWDQAGPGSSGEADGGSAPSGALDAAAAVAAKINAMLVAKGKLKPSQISS
AASTDKVAGVGGNKVKDDLVVAEVEINDVPLTCRNLLTRGQTQDEISRVSGAAVSTRGRF
MTAEEKSKALPSDRPLYLHVQGQTRDLVDKAVNRIKEIITNGVVKAATNSSYSGATVTVY
QQPGPAPPPTIPPAAHKPHYPGGMHYVQDKLFVGLDQAVQGFCVKERVEGPGCSYLQHIQ
AETGAKVFLRGRGSGCLEPASGREAFEPMYIYISHPKPEGLAAAKTLCENLLQTVHAEYS
RFLNQMSSVMPTQAGFIQPPSINGIPPQAPYYSPAGFQPSYPGPTPPPQPVAPQYPAAPS
APAPGPLPTAQYPITPTPPSAPAQTLPPAPFPPAAPAPPKAVAPPNPPQKRRFTEEVPDE
TDSGLLGYQHGPIHMTNLGAGMSVGSSEASGPPSAASSGPVRERDSSSSRLMPPPCAPAP
VDGLRVQKAEEKTPAPPSLLEPQVKRVRMGLVAYAGDSSDEEEDHGASRASGATGWTYRC
PSSPPPRPKTQAQTQPMPFWMAP
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgatcacatttgtgacgggttttgtcacgagatcctgcgcgtgcgcggcggcggcggaa
gtgacgcagcgcgctgcgtttccgttggctggtctgtccgctggagcgtcagaaacggat
cggttcggttcggttcatcgcaatcagaagcataaacgcatctctcgtcagatgtcgttc
ggtgtcccgcacggcggcggccggcgcagtaagtgggaccaggcgggtccggggtcttct
ggcgaggctgatggaggctctgctccgagtggagctctggacgccgctgcagccgtcgct
gccaagatcaacgccatgctcgtggccaaaggaaaactcaagccgtctcagatcagcagc
gctgcttccactgataaagtggcaggtgtcggtggtaataaggtgaaagatgatctggtg
gtggcggaggtggagattaacgatgtcccgctcacctgtcggaatctgctgacccgcgga
cagactcaagacgagatcagccgagtgagcggcgctgctgtgtccaccagaggacgcttc
atgaccgctgaggagaagagcaaagcactgcccagtgaccgtccactctatctgcacgtc
cagggacaaaccagagacctagtggacaaggctgttaaccggatcaaggagatcattact
aacggtgtagtgaaggctgccactaactcgagctacagcggagcgacggtcaccgtttac
cagcagcccggccccgctcctccacccacaatcccccctgctgctcacaaaccacactac
cccggaggaatgcactatgtgcaggacaagctgtttgtgggtctggatcaggccgtgcag
ggcttctgtgtgaaggagcgtgtggaggggcccggatgctcatatctgcagcacattcag
gctgaaactggggccaaagtcttccttcggggccgggggtccggctgcctggagcccgcg
tctggacgagaggccttcgagcccatgtacatctacatcagtcaccctaaaccagaagga
cttgctgcagctaaaacactgtgtgaaaacctcctgcagaccgttcatgctgagtattct
cgattcctgaatcagatgagcagtgtgatgcccacacaggcagggttcattcagcctcct
tccattaacgggatcccgccgcaggctccgtattattctcccgcgggcttccagccgtcc
taccccggcccgaccccgccgccgcagcccgtcgctcctcagtatccagcggctccttcg
gccccggccccgggccctctccccaccgcacagtatcccatcacccccacgcccccgagc
gccccggctcagacgcttcctccggctccgttcccccccgccgctccggctccgcccaaa
gccgtggctccgcccaatccgccacagaagcgccgcttcacggaggaggtgccggacgag
acggacagcggcctgctgggataccagcatggacccattcatatgactaatttaggtgca
ggcatgtctgtgggcagctctgaggcatcaggacccccgtctgctgcttcctcagggcct
gtgagagagagagacagcagcagcagcaggctcatgccgcctccgtgtgctccggctcca
gtcgacggtctgagggtgcagaaagcagaagagaagacgccggcgccgccgagccttctg
gagccgcaggtgaagcgcgtcaggatggggctggtggcgtacgccggggactcctccgat
gaagaagaggatcatggggcctccagagcgtccggggccacaggatggacgtatcgttgc
ccgtcatcaccgccgccacggcccaaaacacaggcgcagacgcagcccatgcccttctgg
atggcaccgtaa
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