Puntigrus tetrazona (Sumatra barb): 122358224
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Entry
122358224 CDS
T08985
Name
(RefSeq) LOW QUALITY PROTEIN: phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet02010
ABC transporters
ptet04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122358224
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122358224
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptet02000
]
122358224
Transporters [BR:
ptet02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
122358224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
122358224
NCBI-ProteinID:
XP_043113942
LinkDB
All DBs
Position
14:11095364..11107114
Genome browser
AA seq
1582 aa
AA seq
DB search
MKSWRDMRNEILYLTGNSTQSPNHMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFG
NYGNDSDGEPASVYDNSSTPYCNSLMKGLESSPISRMIWRALKPLLMGKILYTPDTPATQ
RIIQEVNKTFQELGVLRDLGGMWEEMRPKIWNFMENSEEMDLVRTLLQNNASARFFNAKL
SGTDWQVEDISSFLSKASEDRRPHASAYTWREVFNETDQAIQTISRFMECVNLDKLEPVA
NEERLVNKSMRLLDDRKFWAGIVFPDMQANTSDLPPNVNYKIRMDIDNVERTNKIKDGYW
DPGPRADPFEDLRYVWGGFSYLQDVIEHGIIRALTGSKEKTGVYIQQMPYPCYVDDMXET
AFAXSMPLFMTLAWMYSVAIIIKGVVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLL
ISAALLVLILKMGNLLPYSDPGVVYLFLTSFAVVTIMQCFLISTLFSRANLAAACGGIIY
FTLYLPYVLCVAWQDYVGFGAKVVVSLLSPVAFGFGCECFALFEEQGVGIQWRNLLSSPM
QEDSYSLTTSISLMLFDSVLYAIMTWYIEAVFPGQYGIPRRWYFPFTKSYWCGEKCGGIT
SAQTNKKENAEAVCIEEEPAHLDPGVYIENLMKVYSNGKLAVDGLTLGFYEGQITSFLGH
NGAGKTTTMSILTGLFPPTSGTAYIQGKDIRTDLNTIRQNLGVCPQHNVLFSMLTVEEHI
WFYARLKGLSEDKVKSEMQQIVMDLGLPHKRKSRTNQLSGGMQRKLSVALAFVGGSKVVI
LDEPTAGVDPYARRGIWDLLLKYRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSS
LFLKTQLGTGYYLTLVKKDFDLSASSCRTSSSTVSYSKASLKKEDSVSESSSDAGLGSDH
ESETTTIGIYFPGFQDDNASESSSDAGLGSDQESEAATAIGNTWPESPVVPVDVALISSL
ILKHVPASRMVEDLGHEITYVLPYESAKDGAFVELFHDLDDRLAYLGISSYGISDTTLEE
IFLKVAEDSGVDTEIISDGTLPVPRHRRHAFGADHQSCLKPLTEDDSFDCNDSEGDPESK
ETDYLSVSNGKGSYQVKGWSLKRQQFVALLWKRLLYARRSRKGFFAQIVLPAVFVCIALV
FSLIVPPFGKYPSLALNPWMYEEQFTFISDDAPHDISTQKLLNALLDDPGFGTRCMEGEP
ISDAPCTMGDEEWSIPEVAESVIDIFMSTNWTMDNPSPACECSCNGKKKMLPECPAGAGG
LPPPQIKMSESETLQNLTGRNISDYLVKTYAQIIXACECSCNGKKKMLPECPAGAGGLPP
PQIKMSESETLQNLTGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGARSTQVIP
PAEEIDDAIHRVREIFQLEKDSGSAADRFLKSLSAFINGLDTKNNVKIWFNNKGWHSIGA
FLNVMNNGILRANLPPGKDPRQFGITAFNHPLNLTKEQLSQVALMTTSVDVLVSICVIFA
MSFVPASFVVFLIQERVNKAKHMQFISGVQPYLYWLANFLWDMCNYVVPATLVILIFVCF
QQKAYVSATNLPVLALLLLLYG
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atgaagagctggcgggacatgcgcaacgagatcctgtacctgacgggcaacagcacgcag
tcccccaaccacatgtaccaggccgtgtcccgcatcgtctgcggtcacccggagggcgga
ggcctgaagatcaagtccctcaactggtacgaggacaacaactacaaggccctgttcggg
aactacggcaatgacagcgacggcgagcccgcctccgtttacgacaactcctccacaccc
tactgcaacagcctgatgaagggcctggagtccagtcccatatcccgcatgatctggagg
gctctgaagccgctgctcatgggcaagatcttgtacacccctgacacccccgccacgcag
aggatcatacaagaggtcaataagacgtttcaggagctcggtgttctcagagacctcgga
ggcatgtgggaagagatgagacccaaaatctggaacttcatggagaacagtgaggagatg
gacctcgttcggacgctcctccagaacaacgccagcgctcgcttcttcaacgccaagctg
agcggcaccgactggcaagtggaggacatatccagctttctgtccaaggcttcggaggac
aggcgcccccatgcttcggcgtacacgtggcgggaagtgttcaacgagacggaccaggcc
atccagaccatctcgcgattcatggagtgcgtgaacctggacaagctggagccggtggct
aacgaggagcgcttggtgaacaagtccatgcgtctgctggacgaccgcaagttctgggct
gggatagtgtttcctgacatgcaggccaacacgtccgatctgccgcccaacgtcaactac
aagatccgcatggacatcgataacgtggagcgcaccaacaagatcaaggacgggtactgg
gatcccggtcctcgagcggacccgtttgaagacctcaggtacgtctggggaggcttctct
taccttcaggacgtcatcgaacacggcatcatacgagctctgaccggcagcaaggagaaa
accggggtttacatccagcagatgccttatccctgctacgtggacgacatgtaagaaacg
gcatttgcnnnctcaatgcctctgtttatgactctggcctggatgtactcggtggccatc
atcatcaagggtgtagtgtacgagaaggaagcccggctcaaggagaccatgaggattatg
ggcctggataacggtatattgtggctgagctggttcatcagtagtctgatcccgctgctc
atcagcgccgccctgctggtgctcatcctgaagatggggaatctgctgccgtacagcgat
cctggcgtcgtctacttgttcctgacctcgtttgcggtcgtgaccatcatgcagtgtttc
ttgatcagcacgctcttctcccgcgctaacctcgccgcggcctgcgggggcatcatatac
ttcaccctttaccttccctatgtgctgtgcgtggcctggcaggactacgtcggctttgga
gccaaagttgtagtgagcctcttgtctccggtggcgttcggcttcggctgtgagtgcttc
gctctgttcgaggagcagggagtgggcatccagtggaggaacctgctctccagccccatg
caggaggacagctacagtctcaccacgtccatctcgctcatgctcttcgactctgtgctg
tacgccatcatgacctggtacattgaagctgtgtttccaggtcagtacggcatcccacga
cgctggtacttccccttcaccaagtcttactggtgtggagagaaatgtggcgggattaca
tcagcgcagactaacaagaaagaaaatgctgaagctgtgtgcattgaagaagaaccggct
cacctggatccgggtgtttacatcgagaacctgatgaaggtttacagcaacggcaaactg
gcggtggacggtttgactctgggtttttatgagggtcagatcacctccttcctgggtcac
aacggcgctgggaaaaccacaaccatgtctatcctcaccggcctgtttccacccacctcg
ggcaccgcttacatccagggcaaagacatccgcaccgatctgaacactatacgccaaaac
ctgggcgtctgtccgcagcacaatgtcctgtttagcatgctcaccgtggaggagcacatc
tggttttatgctcgtctgaagggtctgtctgaggacaaggtgaagtcggagatgcagcag
atcgtgatggacctcggcctgcctcataaacgcaaatctcgcacaaaccagctctcggga
ggaatgcaaaggaagttatcagtagcgctggcgtttgttggagggtcaaaggtcgtgatc
ctggatgagcccaccgccggagtcgacccttacgctcgccggggcatctgggacctgctg
ctcaagtatcgccaaggacgcacgattatcctgtccacccaccacatggacgaagctgac
atcctcggggatcgcatcgccatcatctcccacgggaagctgtgctgtgtgggctcctct
ctgttcctcaagacccagctgggaacgggatactacctgactctggtgaagaaggacttc
gatctgtcggccagctcctgccgtacctccagcagcaccgtgtcctactccaaagctagc
ctcaagaaggaggacagtgtatccgagagcagctctgacgctggactgggcagcgaccac
gaaagtgaaaccaccaccataggtatatatttccctggttttcaggatgacaatgcatcc
gagagcagttcggatgctggtctaggtagtgatcaagagagcgaagccgccacagcgatt
ggaaatacatggcccgaatctcctgttgttcctgttgatgtagccctcatttccagtcta
atcttgaagcacgttcccgcttctcgcatggtggaagacctcggacatgagatcacatat
gtgttgccttatgagtctgccaaagatggtgctttcgttgagctcttccatgatctggat
gatcggctcgcttaccttggcatttcgagctatggtatctcagatactacactcgaagag
attttccttaaagtggcagaggacagtggagttgacactgaaatcatctcagatggaact
ttgcctgtgcctagacatagacgacatgcatttggtgctgaccatcagagctgcctcaaa
cccctgaccgaagatgatagctttgactgcaatgattctgaaggtgatccagaatccaaa
gagacagactacttgagcgtttccaatgggaaaggatcatatcaggtgaaaggctggagt
ttgaagaggcagcagtttgtggctttactgtggaagagattgctttatgctcgccgctca
aggaaaggcttctttgcacagattgttcttcctgctgtgtttgtgtgtatcgctctggta
ttcagtcttattgtcccaccattcggaaaatatcccagcctggctctcaatccctggatg
tatgaagaacagtttacattcatcagtgatgatgccccacatgacataagcacacaaaaa
ttactcaacgctttattagatgatcctggctttggaactcgatgcatggaaggagaacca
atttctgatgctccttgtacaatgggagatgaggaatggtctataccagaagtggcagaa
agcgtgatagacattttcatgtcaacaaactggaccatggacaacccatcgcctgcttgc
gagtgcagctgtaatggcaaaaaaaagatgctcccagaatgccctgctggtgcaggtgga
ctgccacctcctcagattaaaatgagtgaaagtgagaccctccagaacctgacgggacga
aacatatcagactatcttgtgaaaacctatgcacagatcattnacgcttgcgagtgcagc
tgtaatggcaaaaaaaagatgctcccagaatgccctgctggtgcaggtggactgccacct
cctcagattaaaatgagtgaaagtgagactctccagaacctgacgggacgaaacatatca
gactatcttgtgaaaacctatgcacagatcattgggaaaagcttaaagaacaagatatgg
gtgaacgaattcagatatggaggattttcattgggagctagaagcacccaggtaattcct
cctgctgaagagatcgatgatgccatccatagagtcagggaaatcttccaactggagaag
gactcaggatcagcagctgaccgtttcttgaaaagcctgtcagcctttatcaatgggttg
gacactaagaataatgtcaagatatggttcaataacaagggctggcacagtattggagcc
ttcctcaatgtaatgaacaatggtatcttgcgtgccaacttaccacctggcaaagacccc
cgtcagtttggcatcactgcgtttaaccatccgctcaatctgactaaggaacagctttct
caagtggccctaatgaccacctcagtggacgtgctggtttccatctgtgtgatcttcgcc
atgtccttcgtccctgccagcttcgttgtcttcctcattcaggagcgagtaaataaggcc
aagcacatgcagtttatcagtggagtgcagccatacctctactggctggccaactttctc
tgggatatgtgcaattatgttgttcctgctactctggttatcctgatctttgtgtgcttt
caacaaaaagcctacgtctctgcaaccaacctgcctgttcttgcccttcttctgcttctg
tatgggtaa
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