Puntigrus tetrazona (Sumatra barb): 122358245
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Entry
122358245 CDS
T08985
Symbol
si:ch73-233f7.1
Name
(RefSeq) protocadherin beta-15 isoform X1
KO
K16499
protocadherin delta 2
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ptet04515
]
122358245 (si:ch73-233f7.1)
Cell adhesion molecules [BR:
ptet04515
]
Cadherins
Protocadherins
122358245 (si:ch73-233f7.1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
122358245
NCBI-ProteinID:
XP_043113974
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All DBs
Position
14:complement(8269442..8278787)
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AA seq
1016 aa
AA seq
DB search
MDRRLPRRRWTLTGQVVCLLLCACALDRVLAQIRYSVPEELEHGAFVGNIAEDLGLDVAK
LSSRRFRIVSGARKQYLEVNLENGILFVNEKIDREELCEQSPVCFLHLQVVIENPLELYR
VEVEILDVNDNAPSFPWSEFNLEITESAAPSSRFPLESAQDLDVGSNSLRSYLLSANQHF
VLDIQTRNDGSKFAELVLQSPLDREQQKTHEMVLTAVDGGSPLRSGTAQITVTVLDANDN
VPVFDRNVYRVSLVENAPRGTLVLKLNATDLDEGANGEITYSFSGHAPLKVRELFSVDSH
SGEIRVKGIVDYERASVYELYVQAKDKGPSAVAVHCKVLVDILDVNDNAPEVILTSVSTP
VQEDAPPGTVIAVISVMDRDSGENGAVDCQIPGNVPFQLHSSFKNYYTLVTSEFLDRESV
SEYNISLTARDLGSPALSTRKTILVQVSDINDNPPRFIQPSYTVYVTENNAPGASICSVT
AFDPDSNQNAYLSYSILDGQIQGMPVSTYVSINSDNGNIYALRSFDYEQLRNFQIRVQAQ
DAGFPPLSSNVTVNVFVLDQNDNAPVILSPLPRNGSVATEMVPRSVDAGYLVAKITALDA
DAGQNSRLSYQMLQATDPGLFSVALYTGEIRTIRRFVDKDAIRQRLVILVKDNGQPPLSA
TVSIILSVVDSVPESLSDFGDLSLSPQPPSNLALYLIVSLSTVSLIFLVAIIVLAAVKCY
KDRDSLGGYAISSLGAACCSFEPEPPAEVFKKSNLNLQISTGAKVPTNCVEVNSNPGNLS
QAYCYKVCLTPESAKSDFMFLKPCSPGTPRNNAARGADNLALSSQSRCSSVNNGATTPNE
LKQANTDWALTKNQTSSLKSCNSINMDGTQMRKAMQAEPENYVGQMAAGQYWTWGTRSRE
YRMHSPAGSVSQRAWTPHYTPQHNPTHHQHHQQQQQQQQQPAAQVHSHPPPDYQHNVYIP
GTPSGFCTLRPSYRSELDVHNSFSTFGKKRRFISPSSYDPHDDTGAEVINNDLYNE
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atggatcggaggcttccgaggaggcgatggacgttgacagggcaggttgtgtgtctgctc
ctgtgtgcgtgcgcactggacagggttttggcgcagattcgttattcagttcccgaggag
ttggaacacggggctttcgttggaaatatcgcggaagatttgggcttggacgtggccaaa
ttgtcctcgcggagattccggatcgtgtccggggctagaaaacaatatctggaagtgaat
ctggagaacggaattttgttcgtgaacgagaagatcgaccgcgaggagctgtgtgaacaa
agtcccgtttgtttcttgcacttgcaggtggtcatcgagaaccctttggagctgtaccgg
gtagaagtagagatcttggacgttaatgacaacgctcccagtttcccgtggagcgagttt
aatctggagatcacggagtctgccgcgccgagctcgcgcttcccgctggagagcgcgcag
gacctggacgtgggctcgaactctctccgctcgtacttgctgagcgccaaccaacacttc
gtgctggacatccagacgcgcaacgacggcagcaagtttgcagaactcgttctgcagtcg
ccgttagaccgagagcagcagaagacgcacgagatggtgctcacggccgtggacggcggc
tccccgttgcgctcgggcacggcgcagatcacggtaaccgtgctggacgcgaacgacaac
gtccccgtgttcgaccgcaacgtataccgggtcagcttggtggagaacgcgcccagaggc
acgctcgtgctcaaactcaacgccacggacctggacgaaggcgcgaacggcgagatcacc
tattcgttcagcgggcacgcaccgttgaaggtgcgcgagctgttcagcgtggattctcac
tcgggcgagataagggtgaagggaatcgtggactacgagagggccagcgtgtacgagctt
tatgtgcaggcgaaagacaagggtccctcggccgtggccgtgcattgcaaagtgctggtc
gatattctggacgtgaacgacaacgcgcccgaggtaatattaacctccgtgtcaacacct
gttcaggaggacgcgcctccgggcacggtcatagccgtgatcagcgttatggaccgcgac
tccggagagaacggagcggtggattgccagatccccgggaacgtgccgtttcagctgcac
tcctcttttaaaaactattacacactcgtgaccagcgagtttctcgacagggagtctgtc
tcggagtacaacatctccctcacggcgcgagatctgggctcgcccgcgctgtccaccaga
aagacgattctggttcaagtgtctgacattaacgacaacccgccgcgcttcattcagccc
tcgtacaccgtatatgtgaccgagaataacgcccccggcgcttccatttgctcggtgacc
gcattcgatccggactctaatcagaacgcatatttgtcctactccatccttgacggtcag
atccagggcatgccagtgtccacttacgtctccatcaattccgataacggcaacatctac
gcccttcgctctttcgattacgagcagcttcggaactttcagatccgcgtccaggcgcag
gacgccgggttcccgccgctcagcagcaacgtgaccgtcaacgtgttcgttttggatcag
aacgacaacgcgccggtcatcctgtccccgctgcccagaaacggctctgttgctactgaa
atggtgcccaggtcggtggacgctgggtacctcgtggccaagatcacggcgctcgacgcg
gacgcggggcaaaactctcgcctgtcgtatcagatgctgcaggcgacggatcccgggctg
ttcagcgtggctctatacaccggagagatcaggacgattcgtcgcttcgtagacaaagat
gccatcaggcaaagactcgtcatacttgtcaaggacaacgggcagccgccgctctcggcc
accgtgtccatcattctgtctgtagtggactccgtgccggagtcgctctccgacttcggc
gacctctcgctcagcccccagccgccgtctaacctcgcgctctatttaatcgtgtcactg
agcaccgtctcgctcatcttcctcgtggccatcatcgtcctggcggccgtgaagtgctac
aaagaccgcgactccctcggcggttacgcgatctcctcgctcggcgccgcttgctgcagc
tttgaaccggagccgcccgccgaggtgttcaaaaagtccaatctcaacctgcagatctcc
accggcgccaaagtgcccacgaactgcgtggaggtaaacagcaaccccggaaatctctct
caagcgtactgctacaaagtgtgtttgacgcccgaatctgcaaagagcgactttatgttt
ctcaagccttgcagtcccggcacaccgagaaacaacgcggcgagaggcgcggataacctg
gcgctgagctcacagagccgctgctcgtccgtgaacaacggagcgactacaccgaacgag
ctgaaacaagcgaacactgactgggccctcaccaaaaaccaaacttcctctctgaaaagc
tgcaactctataaacatggatggcactcagatgcggaaagccatgcaggccgaaccagag
aactatgtgggtcaaatggctgccggacagtactggacctggggaacccgctcgagagag
taccggatgcattctccagcaggcagcgtttctcagagggcctggactcctcactacaca
ccccaacacaaccccacccaccaccagcaccaccagcagcagcagcagcagcagcagcag
cccgcggcacaggtccactcgcaccccccgccggactaccagcacaacgtctacatcccc
ggcacaccgtccggcttctgcaccctgcggcccagctaccgcagcgagctcgacgtccac
aactccttctccaccttcggcaagaaacgtaggttcatctctcccagcagctacgacccg
cacgacgacacgggcgcagaggtcatcaacaacgacttgtacaacgaataa
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