Puntigrus tetrazona (Sumatra barb): 122358276
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Entry
122358276 CDS
T08985
Symbol
itga6l
Name
(RefSeq) integrin alpha-6 isoform X1
KO
K06485
integrin alpha 6
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04382
Cornified envelope formation
ptet04510
Focal adhesion
ptet04512
ECM-receptor interaction
ptet04514
Cell adhesion molecules
ptet04810
Regulation of actin cytoskeleton
ptet04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122358276 (itga6l)
04514 Cell adhesion molecules
122358276 (itga6l)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122358276 (itga6l)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122358276 (itga6l)
04810 Regulation of actin cytoskeleton
122358276 (itga6l)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
122358276 (itga6l)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptet04147
]
122358276 (itga6l)
04515 Cell adhesion molecules [BR:
ptet04515
]
122358276 (itga6l)
04090 CD molecules [BR:
ptet04090
]
122358276 (itga6l)
Exosome [BR:
ptet04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122358276 (itga6l)
Exosomal proteins of breast milk
122358276 (itga6l)
Cell adhesion molecules [BR:
ptet04515
]
Integrins
Integrin alpha subunits
122358276 (itga6l)
CD molecules [BR:
ptet04090
]
Proteins
122358276 (itga6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
122358276
NCBI-ProteinID:
XP_043114017
LinkDB
All DBs
Position
14:23979011..23990098
Genome browser
AA seq
1056 aa
AA seq
DB search
MCSGFLYSPHPAPQTSIMLFSQWALVLTVWVLRAEVSSFNLDTQNVMNKRGEAGTLFGFS
MAMHHQLKPSEERVLLIGAPRAKALPGQNANISGGLYRCTFTNPSDYCERVSVDIKERPS
NNPGQDYRENQWLGVRVQSQGRGGKVVTCAHRYQDWSYDNQRLLGRCFLLEQDLKLVADG
ESTRAICKNRETDKHKFGYCQQGVSVAFSKDNKYIIYGAPGAYDWKGIVHMEPVDNFAIE
TFETGDHNQRQHKLIPVDISSLLGFSVDTGMNLMKKGELNVVAGAPRSKHSGEVLLLRPE
EKAETRNLKAEYILQGPGLASSFGYDLAVLDLNGDGWDDLVVGAPEFSAINMDRDVGGAA
YVYINKAKGQRWNQIEPVCLYGKKDSMFGLAVAHIGDINQDGYQDFGVGAPNEDTGRGRV
YIYHGSADGFQEKPEVIDAGDPSVKSFGYSLAGNMDLDDNGYPDLAVGSLSDSVQVYRSK
PVVNIEKTLTLTPNTIDFKAQDCKRFSCDITAQSCFTYTAQTPTYNDKLRIKYTLKADTL
RRERGLRSRVVFVNSEAAQGYQELSVQGKQECIQTKLRLLGDIQDKLTSIVVILSVSLPS
NNPKQAVRNFPGLEPVLNAMQDITTKAEVAFRNAGCGSDNICQSNLQLEYRFCTKDQQRD
KCFPLSMENDIPVISPGDKNVALEVTVSNIGGDDAHQSQLSVAFPEFLPLSSVEPKKNSE
TQVLCNPNENKTQAACQLGNPFKRDSEVSFFLILNTERLSLRVTSANVTMLLKTISIQNI
PVVVAEAKIIFELYLKVAGLAKPSQLFFGGEVKDLKAMKSEEDIGSLVQYEFRIINVGRP
LKSFGSVVLNIQWPNATKEGKRLLYLMQIENHRKNIIHCTPGEATNPLRFNKASSRGRRE
VEHESSLKALASIDFFPFLDNIRKYKTLTCDDEIDCVEIKCPLEEVDSTTAVVLHARLWN
NTFLEKYGSLNYLDIVLDAYLTLNATQKNIGMQPPDTKVKLTVFGERRPALLSKVPWWVI
LLSILTALFLLGLLFYLLRKFECLNCGVCAQEKKIY
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcaggtttcctttacagtccacatccagctccgcagacgtctatcatgttgttc
agtcagtgggctctcgtcttgaccgtgtgggtgcttcgtgcggaggtttcgtcttttaac
ctggacacgcagaacgtgatgaacaagcgtggagaagctggcactttgtttgggttttct
atggccatgcaccatcagctcaaaccttcagaggagcgagtattgctgattggagcccct
cgcgctaaagcgttgcccggtcaaaatgccaatatatctggaggtctgtacagatgtaca
ttcacaaacccctctgattactgtgaacgcgtttctgttgatataaaagaacgtccctca
aacaatcctggacaagattatagagaaaatcaatggctgggcgtccgtgttcaaagtcag
ggacgaggaggcaaagtagtgacttgtgcccaccggtaccaggattggagctacgataac
cagcggctgttggggagatgttttctcctggaacaggaccttaagttggtggcggatgga
gagtccacgagagcaatttgtaagaatagggaaacagataagcacaagtttggctactgt
caacaaggggtctctgtagcgttctccaaagacaacaaatatatcatttatggagctcca
ggagcgtatgactggaaaggcattgtgcacatggagcccgttgataacttcgctatagag
acctttgaaacaggagatcataatcagcgtcaacacaagcttattcctgtggacatcagc
agccttttaggattttctgtcgatactgggatgaacctcatgaaaaaaggagagctgaat
gttgtggccggggctccacgatcaaagcacagcggggaggttttgctgctcagaccggaa
gaaaaggcagaaacaaggaatctgaaagctgagtacatcctgcaaggtccaggtttggcc
tcttcctttggctacgacctcgctgttcttgacttaaatggagatgggtgggatgatctt
gttgtgggtgctcccgagttctccgcaataaacatggacagagatgtgggaggagctgcg
tatgtttacatcaacaaagctaaaggacagcgctggaaccaaatcgagcccgtttgtctg
tatgggaaaaaggactccatgtttggactagcggtggcacatattggggacatcaatcaa
gatggataccaagattttggagtgggcgctcctaatgaggatacagggagaggtcgagtg
tacatatatcatgggtcagctgacgggtttcaggaaaaaccagaggttatagatgctgga
gaccctagtgtcaaatcatttggttattctttggctggaaacatggatttagacgataat
ggctatccagaccttgccgtgggttcactttcagatagcgtgcaagtttataggagtaaa
ccagtggtaaacatagaaaagaccttaacattaaccccgaatactattgattttaaggct
caggactgcaagagattttcatgcgatattacagcccagtcctgcttcacttacactgcc
cagacacctacatacaatgacaaactgaggatcaagtacacgctaaaagctgatacactg
cggagagagaggggtcttcgctcacgagtggtttttgtgaattctgaggctgcgcagggt
taccaggaactgtctgttcagggcaaacaagagtgtatccagaccaagctcaggctgctg
ggagacatccaggataagctgaccagcattgtcgtcatcctgtctgtttctttgccatct
aacaatccgaaacaggccgtcagaaacttccctgggttagagccggttctgaacgctatg
caggacattacaaccaaagcagaggtcgcctttagaaacgccggatgtggaagtgacaat
atctgtcagagtaacctgcagctcgagtataggttctgcaccaaagaccagcaacgagac
aaatgtttccctctgtccatggaaaatgatattcctgtcatttcgcctggtgataaaaat
gttgccctggaggtcactgtaagcaacataggtggagatgacgcacaccagagtcagctt
tctgtggcgttcccagaatttctgccgctatcgtcagtcgagccaaagaagaatagcgaa
actcaggtgctgtgtaacccaaatgaaaataaaacacaggctgcctgccaactcggaaat
ccttttaaaagagactctgaggtttccttcttcctgatacttaacacagaaaggctttcc
ttgagggtgacaagcgctaatgtaactatgttgctgaaaacgatcagcattcaaaatatt
ccagtagttgttgcagaagcaaaaattatctttgaactctatctgaaagtagccggcctg
gctaaaccttcccaattattctttggaggagaagttaaagatttgaaagccatgaaatca
gaagaagatatcggctctttggtccaatatgagttcaggatcataaatgtaggtcggcct
ctgaagtcctttggttctgttgtgctcaacattcagtggccaaatgcgaccaaagaagga
aaacggctcctgtaccttatgcagatcgagaatcatcggaaaaatattattcactgcacg
ccaggagaggcaaccaacccactccgatttaacaaggcatcatccagaggacggcgtgaa
gtagagcatgaatcaagcctgaaggctctcgcctctatagattttttcccctttttggac
aacataagaaagtataaaaccctgacatgtgatgatgaaatagactgtgtggagataaag
tgccctcttgaggaagtggacagcactacagccgttgttcttcacgcgcgtttatggaac
aatacttttctcgagaagtacggttcgttgaactacttggatattgtactggatgcatat
ttgactcttaatgcaactcagaagaatatcgggatgcagccacccgataccaaggtgaag
ctaacagtttttggtgaaagaaggcctgctttgctcagtaaagtcccatggtgggtcatt
ctgctcagcatactgactgcactgtttttactgggtcttctcttctacctgttaagaaag
tttgaatgcttgaattgcggagtgtgtgctcaagaaaagaagatatactaa
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