KEGG   Puntigrus tetrazona (Sumatra barb): 122358299
Entry
122358299         CDS       T08985                                 
Symbol
rnf4
Name
(RefSeq) RING finger protein 4 isoform X1
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
ptet  Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:ptet00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ptet04121]
    122358299 (rnf4)
Enzymes [BR:ptet01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     122358299 (rnf4)
Ubiquitin system [BR:ptet04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    122358299 (rnf4)
SSDB
Motif
Pfam: zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-RING_UBOX zf-RING_5 zf-C3HC4_3 zf-C3HC4_4 zf-RING_4 zf-rbx1 RING_XB3-XBAT31 Prok-RING_4 zf_RING_Vps8 zf-UDP zf-RING_10 zf-RING_11 zf-Nse IBR_1 Rad50_zn_hook zf-RING_6 DZR zf-ANAPC11 zf-RING_16
Other DBs
NCBI-GeneID: 122358299
NCBI-ProteinID: XP_043114051
LinkDB
Position
14:2582132..2586930
AA seq 185 aa
MSTATQRKRRTSSATCSRRGNSKRSRTQMSQTAMETIDVLETDRTNSEEDVVDLTCEGSE
PAVVDLTNNDSIVVVEDGVQSRRGQGTESYVLSSDEEEESSLRLSPGLLSSLHASSRARS
TPGAVSCPVCMDAYSEIIDSGRLMVSTKCGHLFCSQCIRDSLNRAHSCPTCRKKLTHKQY
HPIYI
NT seq 558 nt   +upstreamnt  +downstreamnt
atgagtactgctacacagaggaaaagacggacttcatctgctacatgttcccgccgtgga
aacagcaagaggagccggacccagatgtctcaaacagcaatggagaccattgatgtgctg
gaaactgacagaactaacagtgaagaagatgtggtagatttaacatgtgaagggtctgaa
cctgcagttgttgacctcaccaataatgattctattgtggttgtggaagatggtgtacaa
agcagacgtggacagggcacagagagttatgtattgagcagtgatgaagaggaagagtcc
agtctcagactcagtccaggcttactgtcctctcttcatgccagctcacgagccaggtct
acaccaggggctgttagctgtcctgtttgcatggatgcgtattcagagatcatcgacagt
gggcggctcatggtctccacgaagtgcggccaccttttctgcagtcagtgcatccgcgac
tctctcaacagagctcacagctgccctacatgtagaaagaaactcacgcacaaacagtac
cacccaatatatatctaa

DBGET integrated database retrieval system