Puntigrus tetrazona (Sumatra barb): 122358807
Help
Entry
122358807 CDS
T08985
Symbol
actn4
Name
(RefSeq) alpha-actinin-4 isoform X1
KO
K05699
actinin alpha 1/4
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04510
Focal adhesion
ptet04517
IgSF CAM signaling
ptet04518
Integrin signaling
ptet04519
Cadherin signaling
ptet04520
Adherens junction
ptet04530
Tight junction
ptet04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122358807 (actn4)
04518 Integrin signaling
122358807 (actn4)
04519 Cadherin signaling
122358807 (actn4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122358807 (actn4)
04520 Adherens junction
122358807 (actn4)
04530 Tight junction
122358807 (actn4)
09142 Cell motility
04810 Regulation of actin cytoskeleton
122358807 (actn4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122358807 (actn4)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ptet04812
]
122358807 (actn4)
04147 Exosome [BR:
ptet04147
]
122358807 (actn4)
Membrane trafficking [BR:
ptet04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
122358807 (actn4)
Cytoskeleton proteins [BR:
ptet04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
122358807 (actn4)
Exosome [BR:
ptet04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122358807 (actn4)
Exosomal proteins of colorectal cancer cells
122358807 (actn4)
Exosomal proteins of bladder cancer cells
122358807 (actn4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
Uds1
Motif
Other DBs
NCBI-GeneID:
122358807
NCBI-ProteinID:
XP_043114640
LinkDB
All DBs
Position
15:22572491..22616753
Genome browser
AA seq
901 aa
AA seq
DB search
MVDYHAANNQTQYSTGGQPSYMEQENDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQ
IENIEEDFRDGLKLMLLLEVISGERLPKPERGKMRVHKINNVNKALDFIASKGVKLVSIG
AEEIVDGNAKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNVQNFHI
SWKDGLAFNALIHRHRPELIDYDKLRKDDPVTNLNNAFEVAERYLDIPKMLDAEDIVNTA
RPDEKAIMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEHLMEDYEKLASDLLEWIR
RTIPWLENRAPEKTMAEMQQKLEDFRDYRRVHKPPKVQEKCQLEINFNTLQTKLRLSNRP
AFMPSEGRMVSDINGAWHKLEGAEKGYEEWLLNEIRRLERLDHLAEKFRQKAAIHESWTD
GKEAMLTQKDYETASLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPS
VNARCQKICEQWDVLGSLTQSRRESLERTEKQLESIDELYLEYAKRAAPFNNWMEGAMED
LQDMFIVHNIDEIQGLITAHDQFKSTLPEANKEREAIQAIQAEVQKIAQYNGIKLAGNNP
YTTITPQSIDKKWEKVQQLVPQRDQALQEELARQQSNDHLRRQFANQANMIGPWIQNKME
EIGRISIEMNGTLEDQLTHLRQYEQSIIEYKPNIDQLEGDHQLIQEALIFDNKYTAYTME
HLRVGWEQLLTTIARTINEIENQILTRDAKGISQEQLHEYRTSFNHFDKDHSGVLQAEEF
KACLISLGYDVENDKQGDAEFARIMGIVDPNNSGAVTFQAFIDFMSRETTDTDTADQVIA
SFKILAGDKNYITAEELRRELPPDQAEYCIARMAPYTGPDAVPGALDYMSFSTALYGESD
L
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggtagattatcacgccgccaataatcaaacccagtattcgacgggaggacagccgagc
tacatggagcaggagaacgactgggaccgggacctgctgctggacccggcctgggagaag
cagcagcggaagactttcacggcctggtgcaactctcacctgcggaaggcgggaacgcag
atcgaaaacatcgaggaggatttcagagatggactcaaactcatgctgctcctagaggtc
atctcaggggagaggttacctaaacccgaaagaggcaagatgagagttcacaagatcaac
aacgtcaacaaagcgctggacttcatcgccagcaaaggagtcaagctggtgtctattggt
gcagaagaaatcgtggatggaaacgccaagatgactctgggaatgatttggaccatcatc
cttcgcttcgccatccaggacatctcagtggaggaaacctccgctaaagaaggattgttg
ctctggtgtcagagaaagacggctccttacaagaacgtcaacgttcagaacttccacatc
agctggaaggatggtctcgccttcaatgctctgatccacagacacaggccagagctcatc
gattatgacaagctgagaaaggatgacccagtgaccaatctgaacaacgcttttgaagtg
gcagagcgatacctcgacatccccaagatgttggatgcagaggacattgtgaacacagca
cgtccggatgagaaagccataatgacctatgtgtccagtttctaccatgccttttctgga
gcccagaaggctgagacagcggctaatcgtatttgcaaggtgttggcggtcaatcaagag
aatgagcacctgatggaggactatgaaaaactggccagcgatcttttggagtggattcgt
aggacaatcccatggctggaaaaccgtgctccagagaaaaccatggcagaaatgcagcag
aagttggaagatttccgtgattaccgtcgcgttcacaaaccacccaaagttcaggagaag
tgtcagttagagatcaacttcaatacattgcagaccaaactacgactgagcaaccgacca
gcctttatgccatctgagggacgcatggtgtcggacattaatggtgcatggcataaactg
gaaggggcggaaaaaggctatgaagagtggctactgaatgagatccgtcgtctggagaga
cttgaccatcttgcagaaaagttccgtcagaaggcggcaatccatgaaagctggacagat
ggtaaagaggctatgctaacacagaaggactatgagaccgcatctctgtctgagatcaaa
gctctcctgaagaagcatgaggcattcgaaagtgaccttgctgcccaccaggacagagtg
gagcagattgctgccattgcacaggagctcaatgagttggactactacgattccccaagc
gttaatgcacgctgtcagaagatctgtgagcaatgggatgttctgggttccctcacacag
agtcgcagagaatctctggagagaaccgagaaacagctggagtctattgatgagctgtac
ctggagtatgccaagagagcagcaccattcaacaactggatggagggagccatggaggac
cttcaggacatgttcattgtacacaacattgatgagatacagggactgataacggctcat
gaccagttcaaatcaactcttccagaggcaaataaagagcgggaagctatccaggccatc
caggctgaagttcagaaaatcgcacagtacaatgggatcaaactggctggaaacaatcct
tacaccaccatcacccctcagagcattgacaagaagtgggagaaagtgcaacaactggtt
ccacagcgtgatcaggctcttcaggaagaactcgcacgtcagcagtctaatgaccatctc
agacgccagtttgccaaccaggccaacatgattggaccatggatccaaaataagatggag
gagattgggcggatatcaattgagatgaatggaacgctggaagatcagctgacccacctc
cgtcagtatgagcagagcatcattgaatacaagcccaacattgaccaactggagggagac
catcagctcattcaggaagcacttatatttgacaacaaatacactgcttacactatggag
caccttcgggttggttgggagcaactccttactacaattgctcgcaccattaatgagatc
gagaaccagattctgactcgtgatgctaaaggcatcagccaagagcagcttcacgagtac
cgcacgtccttcaatcacttcgacaaggaccacagtggtgtcttacaagctgaggagttc
aaggcttgtttgatcagtctgggttacgacgtagaaaacgacaagcagggtgatgctgaa
tttgctcgcatcatgggtatcgttgaccccaacaacagtggagcagtgaccttccaggct
ttcatcgacttcatgtcaagagaaacaaccgacacagacaccgcagaccaggtcatcgcc
tcatttaagatcctagccggtgacaagaactacatcacagccgaggagttgaggcgtgag
cttcctcctgaccaggcagagtactgcattgcccgaatggcaccatacacgggccccgac
gcggtgccaggcgcccttgactacatgtccttctccaccgccctgtatggggagagcgac
ctctaa
DBGET
integrated database retrieval system
