Puntigrus tetrazona (Sumatra barb): 122359068
Help
Entry
122359068 CDS
T08985
Name
(RefSeq) integrin beta-1-B-like isoform X1
KO
K05719
integrin beta 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03271
Virion - Rotavirus
ptet04145
Phagocytosis
ptet04510
Focal adhesion
ptet04512
ECM-receptor interaction
ptet04514
Cell adhesion molecule (CAM) interaction
ptet04517
IgSF CAM signaling
ptet04518
Integrin signaling
ptet04530
Tight junction
ptet04810
Regulation of actin cytoskeleton
ptet04820
Cytoskeleton in muscle cells
ptet05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
122359068
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122359068
04514 Cell adhesion molecule (CAM) interaction
122359068
04517 IgSF CAM signaling
122359068
04518 Integrin signaling
122359068
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
122359068
09144 Cellular community - eukaryotes
04510 Focal adhesion
122359068
04530 Tight junction
122359068
09142 Cell motility
04820 Cytoskeleton in muscle cells
122359068
04810 Regulation of actin cytoskeleton
122359068
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
122359068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122359068
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptet04147
]
122359068
04515 Cell adhesion molecules [BR:
ptet04515
]
122359068
04090 CD molecules [BR:
ptet04090
]
122359068
Membrane trafficking [BR:
ptet04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
122359068
Exosome [BR:
ptet04147
]
Exosomal proteins
Proteins found in most exosomes
122359068
Cell adhesion molecules [BR:
ptet04515
]
Integrins
Integrin beta subunits
122359068
CD molecules [BR:
ptet04090
]
Proteins
122359068
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
122359068
NCBI-ProteinID:
XP_043115134
LinkDB
All DBs
Position
2:21099685..21115999
Genome browser
AA seq
799 aa
AA seq
DB search
MDVRLLLISVLLGLSRAQLDGNECTKASAQSCGECIQAGEKCGWCTDEDFLKQGEQKSTR
CDEIEALIKKGCSKASIEDPRGTVTVNKNQSLTERPKDGVKLKPDQITQIQPQKLTLNLR
SGEAQKFKLTFKRAEDYPIDLYYLMDLSYSMKDDLENIKKLGTDLMLEMQKITSDFRIGF
GSFVEKTVMPYISTTPAKLLNPCSSDQNCTSPFSYKNVLSLTADGRQFNDLVSRQQISGN
LDSPEGGFDAIMQVAVCANQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKCHLQ
DNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYQELKNLIPKSAVGTLSSDS
GNVIKLIIDAYNSLSSEIILENSRLPEGVSISYISHCKNGVSEKGENGRKCSNISIGDQV
TFEVAVTAKGCPSNGKSETIKIKPLGFTEEVEIVLNFICECECHKKGIPNSPVCHFGNGT
LECGACRCNEGRIGRVCECSKDEVRTEDLDANCRMDNGTDICSNNGDCVCGTCECKKRDN
PEERYSGKFCECDNFNCDRSNNMLCGGHGRCECRKCICDANYTGSACDCSLDTSTCLASN
KQICNGRGTCECGACKCTDTKFQGPTCEICPTCPGVCTEHKDCVQCRAFKTSEKNDMCDI
ECNYFTLKKVKKKEDLPQPNDQPYINHCKERDANDCWFFFTYATKNDSSVEVHVADELEC
PSGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDAQENPIY
KSPINKFQNPGYGNKGVTL
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgaggctgctcctgatttcagttcttctgggactcagcagggcacagctagat
ggtaacgaatgcaccaaagcctcggcccagtcttgtggagaatgcattcaggccggagaa
aagtgtggctggtgtacagacgaggactttctaaaacagggagagcaaaagtccacacgg
tgtgatgagattgaagctctgattaagaaaggctgttctaaagcgagcatagaagatcct
cgaggaactgttactgtcaacaagaaccagtctttaacagaacgcccaaaggatggagta
aaactgaagccagaccagatcacacaaattcaaccacagaaactcaccctaaacctccgt
tcaggtgaagctcagaagttcaagctgacattcaagagggccgaggattatcccatagat
ctctactacctgatggacctcagctactcgatgaaagacgatttagagaacatcaaaaaa
ctgggaaccgaccttatgttggaaatgcaaaagatcacatccgacttcaggattggcttt
ggctcctttgtggagaaaaccgtcatgccgtacatcagcacgacaccagccaagctgcta
aacccctgctcatcagatcagaactgcaccagcccattcagctataaaaatgtgctgagt
ttgactgccgatggaagacagtttaatgaccttgtgagcagacagcagatctcaggaaac
ctggattcaccagagggagggttcgacgccatcatgcaagtggctgtctgtgcgaaccag
attggctggaggaatgttacccgtctgctagtgttttccacggatgctggattccacttt
gctggagacggaaaactgggcggcatcgtgcttcctaatgacgggaaatgccatctgcag
gataacatgtacactatgagccattactatgactatccttcgatcgcacatctggttcag
aaattaagcgaaaacaacattcagaccatttttgctgtaactgaagagttccagcctgtt
taccaggagctgaaaaaccttattccaaagtcagctgtgggaacgctatcctctgactcc
ggcaatgtgataaaactcattattgatgcatataattctctgtcttccgagatcattctg
gagaacagtaggctcccagaaggtgtgtctatctcctacatctcccactgcaagaacgga
gtgagcgagaagggagaaaatgggagaaagtgctccaacatctccattggggatcaggtg
acttttgaggtagcggtcacggctaaaggctgtccatctaatggcaaatcagagactata
aagatcaagccgcttggcttcaccgaggaggtggagatcgtcctcaacttcatctgtgaa
tgcgagtgtcataaaaagggaatcccaaacagcccagtgtgtcactttggcaacggtact
ctggagtgtggagcatgcaggtgcaatgagggacgtattggcagagtatgtgaatgtagt
aaagatgaggtcagaacagaagatctggacgcaaactgccgcatggataacgggacggac
atctgcagcaacaatggagactgcgtgtgtggaacgtgtgagtgcaagaaaagagacaac
ccagaggagaggtacagcggaaagttctgcgaatgtgacaacttcaactgcgaccgctct
aacaacatgctctgcggaggtcacggtcgctgtgagtgtcgaaagtgtatctgtgatgct
aactacacaggaagtgcttgcgactgctctttggacacctcaacctgtctggccagtaac
aaacagatctgtaacggtcggggcacctgcgagtgcggcgcgtgtaaatgtacggataca
aagtttcagggtccaacctgtgaaatctgcccaacctgccctggagtttgtaccgagcac
aaggattgcgtccagtgcagagcatttaaaaccagcgaaaagaacgacatgtgtgacata
gaatgtaattacttcacacttaaaaaggtgaagaagaaggaggatcttcctcagcccaac
gaccagccctacatcaatcactgcaaggagcgagacgctaacgactgttggttcttcttc
acctacgctaccaagaacgacagcagcgttgaggtccatgtagcagatgagcttgagtgt
ccctctggccctgacatcattcctatcgtagcgggtgtggtcgccggaatcgttctgatt
ggtttagcacttctgctcatctggaagctgctcatgattattcacgaccgcagagagttc
gccaagttcgagaaagagaagatgaatgccaagtgggatgcgcaagagaacccaatatac
aagagccccattaataaattccagaatccaggttatggaaataagggcgtcacactctga
DBGET
integrated database retrieval system
