Puntigrus tetrazona (Sumatra barb): 122359442
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Entry
122359442 CDS
T08985
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein
KO
K08775
breast cancer 2 susceptibility protein
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03440
Homologous recombination
ptet03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122359442 (brca2)
03460 Fanconi anemia pathway
122359442 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptet04121
]
122359442 (brca2)
03036 Chromosome and associated proteins [BR:
ptet03036
]
122359442 (brca2)
03400 DNA repair and recombination proteins [BR:
ptet03400
]
122359442 (brca2)
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
122359442 (brca2)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
122359442 (brca2)
DNA repair and recombination proteins [BR:
ptet03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
122359442 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
122359442 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
BRCA2_TR2
Tower
Motif
Other DBs
NCBI-GeneID:
122359442
NCBI-ProteinID:
XP_043115679
LinkDB
All DBs
Position
15:17623734..17635824
Genome browser
AA seq
2728 aa
AA seq
DB search
MFYSFFPQIDEELGPLNPDWFEELTAKASRDEVCPDSSKAEEDETLKVPETSALASQMFS
TPKIFKQRCFQSPASVPHEESPYEVTNGDSSAFPWTESSPCLFGSAKDSQTFDEKPRNCF
EHQDTPKRSLARSVKQISESLGAQINPDLSWTSSFNTPSSLTPTVILPKTEELAPLSDIK
DKEAIFVRKLFPSLSKGSASNDTLSDTTLKQVIAKSEAIQADDLGEKPVCSPSASLDKSG
LWKQKVPFAIEDGDVRSTVQNVLDGAEDVLSIFFSNSTSTLRRIKTKERIRRRITDSSKD
VKSADLTSEPEEILMDEAEIKSPSKNKDIIKWTPLSLSESILNGDCPDSSLINNHNTVAS
SETNSHTVFNCIAESSQTFSQSVKLKSYPEGSPCQKSLLDKTPAFMLSRKLRKFVYQVPS
SDLSTLNDTQPRCLDQMLKENPSLVESSDLNESTVSSENAVKNHTEPQDIKQLPTEIHDL
DLGLDMTQLSKAFAEDFTQEIMPGALLDQTVQCDQNGRVQHKAEVEEKNKVGSDNDISGL
ADISVTSLNKSTVMLTTFEISHDSGCPSTFSDLDGATALCADIKEFFPSFKTANNKAISI
PDEAIIKAKVSLDEAAGNFLIDTLNGTTPIHYQATETLCKPISGSANVNKSSTGQSIFSQ
HATRVCVSVAPKNDSPKSLKISISSCSSPQSNESDYKTGSKRNITVLNVGFQTENLLKEK
LVRGSDSSKCIHQNLDFKRSAERQTVFDISSTHKPTAVNSSRDGDEEKGTLTASQKADVT
ELCNLLEEENSQHEFTQFKPTNLGSDSHTAEKEWDPDILNGIDFDDSFSCDVVKRKHPVK
TDTFSVNGSNHIQIEDAAKLSCTMSKKTQYAMVPLSAAEDRSLLNMKTVPSCLIDNTSVN
CFGFKTAKGTAISISEKSLNNARYFFEEDDQKAIFNREVNMDFQEVKPEHAKTEPSVNIS
DSLNTENKTYVQIKQDGNFSCGVVNGALKEIHKQLAGNEGTEQNCLGEKTDVVCVDFNSH
FGFSTASGEKLKVSEKALLQARILLNDVDSLEENAFGKHDTSMSTTSLKTKAVSCTNACM
KISQPHLQETEISDGVDNPSFESEKVFQEQKSSSDPKEVLAKVFISETLSNQSVEGYGFQ
TASGKGVSISAGALKKAEAIFKNCDENIILESEKKEGTNDKLDVELKKLDAELKQVNLFT
ENCKSMRFSNVSLIDTNAVLRDTDLTDDLLLQPSSVQQEEGQLKGLQSEFKHSSELYSNC
AFSTASGKKVSISAGALQKAKDLLLESVENLSSADGSPNTTQVVDIQMETSCLRKHKGFS
TAGGKLLSISASGLQMAKYLFRDCEESLSSEDLQHQGFSDVSKKPMTKVQAAFVGCIDVS
SIHEHEMESSSGKNMGFSTAGGKKVTFSATALQRAKSLFKECEEESFVSGSLQNQGCKGF
SSASGKDVTVSVNEALNEVRAAFAGYDDISLHHGPENSSRNSIGFSTAGGKKVAISMSAL
QRAESLFKDCEEGNFSSKEVQPQTKNSEISEDIVDGNLKFETLNKKKYSFSTASGKDVSV
SKVALEEASKLFRDCDAQFTVTDSQLLQSDFSECCPQNKKRQTGTILHSLPSKAPQNEPA
QLDLHSLNFNSCTDTQQKYFEQEAMACTKALLADDDLNESASLAMTEDKKSPSVHDLQAQ
GSFTQNRRKRPFDARNVADSGQPPLKRQLLLEFDRSLDAKTSCLIPLKTCPNGTLRDRRV
FTYNVHLKPNVTRPDRHFMDQKSNDLEQPCSTISVQDTHNPDSKGVFVPPFQRVLKSGTS
NCQDVSKVSTGFIPPFRKENKETAEHRNQIDQNMTTSTSHSDSVAQHCDGKSLHEGSNPK
PTTSVESVPLKIMDAKGKDTQPYRETLNLARDMQDMRLRKKKKLAIHPLPGSLYLAKTSG
VPRTGLRDVVGTKCPGQYTQEELYQHGVHHNVLQITSENAESFRFHCSDFFKHELLMESG
GLQLADGGWLVPDNKGTVGKYEFYRALCDTPGVDPKLISEAWVFNHYRWIVWKRASMERT
FPDLMGGLCLTPEQVLLQLKFRYDVEVDHSQRSAVRRIMERDDTPAKTLVLCVCGVAQTC
QNPEKPEKDDKSPNAKMESCTVWLTDGWYSIKGLLDPPLSAMLNKGRLRIGDKIVSSGAE
LVGSQEACPPLEAPESLMLKISANSTRRARWDTKLGYYRDPRPISLSLSSLFTTGGVVSC
VNIVVLRSYPTQWMEKRPNGVFIFRNDRAEDREATKHSNFKHKSMDLLISKMQTKFEKEM
EGKKKSRGQRRTFSQHEIEALQDGEDLYEAMERDPAVEAYLSARQMDAVHKYRCCLEENR
QAELQERMQKAVMEAQATDGGCPNRDVTPVWKLSISDANDLQSNCVYTLNIWRPSQDLYG
LLREGNRYRAYHLATSEGKKRSGIAHIQFTATKKTFFQEVEVSPEWSHLHFRARECVRFR
ELQNPQFFSPCGEVDIVGCIVSIEGKQGHPPLLHLVDENFDQISVRTYNSLEQLAIEELV
KLRALVALSNVQMRPLSGPVPSLYAGEQAVFSVNPKESHLQEAMTCLKNFVQTCESFFSI
AEEKVSDVVPSGVLGSFQSPRTPAVQSNTKMNGRVTPKQKSSVFSPFTPLNRRTPAPACT
SEGKDPKSLKRRRGLDYLSRIPSPPPLAPLKTTASPCINRTFNPPRRSVTPKPPQNESPR
TSLPPLGEEKWVHDEELVMIDTQALLEG
NT seq
8187 nt
NT seq
+upstream
nt +downstream
nt
atgttttacagtttctttcctcagattgacgaagagcttggacctcttaaccctgactgg
tttgaggagttgactgcaaaagcttctagagatgaagtatgtcctgacagttcaaaagct
gaggaggatgagacgctcaaagtaccagagacctcagccttggccagtcagatgttttct
acacccaaaatattcaagcagcgatgctttcagtcgcctgcttccgttcctcatgaagag
tcgccttatgaagtgactaatggagactcatcagcttttccctggacagaatcaagccca
tgtttgtttggttcagccaaagacagtcaaacgtttgatgaaaaacctaggaattgcttt
gaacatcaggatacaccaaaaaggtctttggcacgttctgtaaagcagatatcggagagc
ctcggggcacaaatcaaccctgacctatcttggaccagctcctttaacacgccatcctct
ttgactcccactgtgatactgcctaagactgaggaacttgctccattaagtgacatcaaa
gacaaggaagcaatttttgtgcggaaactcttcccatctctttcaaaaggctctgcaagc
aatgatacattgagtgatacaacactaaaacaagtgatagccaaaagcgaggctattcag
gctgatgacctgggagaaaagcctgtttgctctccaagtgcatcccttgacaaaagtggc
ttgtggaagcagaaggttcccttcgctatagaggatggggatgtccgcagcacggtgcag
aatgttcttgatggtgctgaggatgtgttgtcaatatttttcagtaacagcacttcaact
ctgcgaagaatcaaaaccaaagaaaggatcagaaggagaataaccgattcttcaaaggat
gtcaaatcagctgatctaacttcagagccagaagagatattaatggatgaggcagaaata
aaaagcccaagcaaaaataaagatatcattaagtggaccccactaagtttatcagaatcc
attcttaatggagactgtccggactcgtctttgataaataatcacaacactgttgcctct
agtgaaactaatagtcatactgttttcaactgcattgcagaaagtagccaaactttttca
cagagtgtgaaactcaagtcttatccagaaggatctccatgtcagaagtctttgttagac
aaaacacctgcttttatgctttctagaaagctccgaaaatttgtgtatcaagtgccaagt
tcagatctgtcgacactcaatgacactcaaccaagatgtttggaccaaatgctcaaagaa
aatccctctttggtagagtctagtgacctaaatgaatctacagtttccagtgaaaatgca
gtcaaaaatcatacagagcctcaagacatcaaacagttgcctacagaaatccatgatctt
gatcttggactagatatgacgcagctttccaaggcatttgcagaggatttcacacaagaa
ataatgccaggagcactgcttgaccagactgtacagtgcgaccaaaatggcagagtgcaa
cataaagcagaagttgaggagaagaacaaagttggtagtgacaatgacatctctggttta
gcagacatttctgtgacctctctaaacaagtcaacagtcatgcttacaacttttgaaatt
agtcatgacagtggttgcccctccaccttttcagatttggatggtgcaacagccttgtgt
gcagacatcaaagagttttttccttcttttaaaacggcaaacaacaaggccatttccata
cctgatgaggccataataaaggccaaagtatcactagatgaagctgcggggaatttttta
atcgacaccttaaatggaactactccaatacattatcaggccacagagacattgtgcaaa
cccatttcaggaagcgctaatgtaaataaatcgtccacaggacagtccatcttctctcaa
catgcaacaagagtgtgtgtcagtgttgctcccaagaatgacagtccaaagagtttgaaa
attagtatttcaagctgctcttcaccacagtcaaatgaatctgattataaaaccggttca
aagaggaatattacagttttaaatgttggctttcaaacagagaatcttttgaaagagaaa
ttggtgagaggttcagactcatcaaagtgcattcatcaaaatttggatttcaaaagaagt
gctgaaagacagactgtgtttgacattagcagcacacacaaacccactgcagtgaactcc
agccgtgatggtgatgaggagaaaggcactttgacagcgtctcaaaaggctgatgttaca
gaattgtgcaatcttttggaggaagaaaatagtcaacatgaatttacccagttcaaacca
acaaatcttggctcagacagccacactgcagagaaagagtgggatcccgatatactcaac
ggaattgactttgatgatagttttagctgtgatgttgtgaaacgaaaacatcctgtcaag
acagacactttttcagtaaatggttctaatcacattcaaattgaggatgctgccaaatta
tcatgcaccatgtcaaagaaaacccaatatgccatggttcctttgtcagcggctgaagac
cgttctttacttaatatgaagactgtaccatcttgtttgattgataacacttcagtaaat
tgttttggttttaaaactgctaaagggacagctataagcatctcagaaaagagtttaaac
aatgcaaggtacttttttgaagaggatgatcaaaaagccatatttaatagggaagtcaac
atggattttcaagaagtaaagccagagcatgctaaaacagagccttcagtcaatatttct
gacagtttgaacacagaaaataaaacctatgttcagattaaacaagatggaaatttcagc
tgtggagttgtaaatggagctcttaaagagatacataagcaattggcaggaaatgaagga
acagagcagaattgtttaggtgaaaaaacagatgttgtttgtgttgacttcaatagtcat
tttggatttagtacagccagcggtgaaaagctgaaagtgtctgaaaaagctcttctgcaa
gcaagaatacttcttaatgatgttgacagcttagaggaaaatgcttttggaaaacatgat
acctctatgtcaacaacaagcctcaaaacaaaagcagtttcttgtacaaatgcctgtatg
aaaatatctcagccacacttacaagaaactgaaatatctgatggtgtggataatccttcc
ttcgaaagtgagaaggtctttcaagaacagaaatctagcagtgatcctaaagaagttctt
gcaaaggtttttatctcagaaaccttgtcaaatcagtcagtggaaggctatggctttcag
actgccagcgggaaaggagtttccatttcagccggtgcccttaagaaggcagaagccata
tttaaaaattgtgatgaaaatattatcttggaatctgagaaaaaggagggaacaaatgac
aaactggatgttgaactcaaaaaactggatgctgaactcaaacaagtaaatttatttact
gagaattgtaaaagtatgagattttcaaatgtgtctctcattgacaccaatgctgttctc
agagacactgacctgactgatgacctcttgttgcagccctcttcagtccagcaagaagaa
ggtcagctgaaaggccttcaaagtgaatttaagcattcttctgagttatacagcaactgt
gctttcagtactgccagtggtaaaaaggtgtccatctcagctggggcactacagaaagct
aaggatctgttgttggagtctgtagagaatttgtcatctgcagatggatctccaaataca
acacaggttgttgatatccaaatggaaactagttgtttaagaaaacacaaaggattctct
actgcaggaggaaaactgttgtctatctctgcttctgggttacaaatggcaaagtatctc
ttcagagattgtgaagagagtttatcctctgaagatcttcagcaccaaggtttcagtgat
gtctcaaaaaagccaatgactaaagtacaggcagcatttgtgggctgtattgatgtctcc
tccattcatgagcacgagatggaaagttcttcaggaaaaaacatgggattctctacagct
ggagggaagaaggtcactttctctgctactgccctacaaagggcgaagagcctttttaaa
gagtgtgaagaggagagttttgtttctgggagtcttcagaatcaaggctgtaaaggtttt
agcagtgctagtggcaaggacgttactgtctctgtaaatgaggcactgaatgaagttaga
gcggcatttgcaggttatgatgacatttccttgcatcatggacctgaaaattcttcaaga
aacagcataggattctctacagcaggagggaagaaggtggcaatctctatgagtgcactt
cagagggcagaaagtctttttaaagattgtgaagagggaaatttttcatctaaggaagtc
caacctcaaactaagaattctgaaatcagtgaggacatagtagatggaaacctaaagttt
gaaacactaaacaagaaaaaatatagtttcagcactgcaagtggtaaagatgtgtctgta
tcaaaagttgcccttgaagaagcttctaaattattcagagactgtgatgcccaatttact
gttactgatagccagcttctacagagtgatttctcagaatgctgtcctcaaaataagaag
agacaaaccggaaccattctgcattctttgccatctaaagcacctcagaatgaacctgca
cagctagacttgcactctttgaattttaacagttgcacagatacccagcagaagtacttt
gagcaggaagcaatggcttgcactaaagctttgctggcagatgatgacctgaatgaatca
gcaagtttggccatgacagaggacaaaaaaagtccatctgttcatgatctacaggcacag
ggatcttttactcagaacagaaggaagcgtccatttgatgccagaaatgtagcagattca
ggtcagccacctttgaaaagacaacttctcttagagtttgaccgatcattagatgcaaag
acctcatgcctcataccactgaaaacctgtccaaatggaactctaagagacaggcgtgtc
ttcacttataatgtccacctcaagccgaatgtcactcgtccagatcggcattttatggac
caaaagtcaaatgacctcgagcaaccatgttcaactatatctgtccaagacacacacaac
cccgactctaaaggagtgtttgtgcccccttttcaaagggttttgaagagtgggacatca
aactgtcaagatgtctctaaagtgtccactggttttataccaccttttaggaaggaaaac
aaagaaacagctgagcacagaaatcaaatagaccaaaatatgacaacttctacatcacat
agtgatagtgttgcacagcactgtgacgggaagagtctacatgagggttctaaccctaaa
ccaaccacttcagtggaaagcgtacctttgaaaatcatggatgctaaagggaaagacacc
cagccatacagagagaccttaaacctagccagggatatgcaagacatgagactcagaaag
aagaaaaaactggctattcatcctctacctggcagcctttaccttgctaagacttctggt
gtccccaggacaggtctgagagatgttgtgggaaccaaatgtcctggccaatacacacag
gaggagctgtatcagcacggtgtacatcacaatgtcttacaaataacaagtgaaaatgct
gaatcattcagatttcactgtagtgacttcttcaaacatgagctcctcatggagtctggt
ggtcttcagctggcagatggaggctggttggttccagacaataagggtactgtggggaaa
tatgaattttatagagcattgtgcgacacccctggtgttgatcccaaattgatcagtgag
gcctgggtattcaaccattaccgatggattgtatggaagcgggcctccatggaaagaact
tttccagatttgatgggtggcctttgtttgactccagagcaagtacttctgcagctaaaa
ttcagatatgatgtggaggtagaccacagtcagagatctgcagtcaggaggatcatggag
agggatgatactccagctaaaacattagtgctctgtgtatgtggtgttgctcaaacttgt
caaaatccagaaaagccagagaaagatgacaaaagtcctaatgcaaagatggaatcctgt
acggtctggctcacagatggctggtactccatcaaaggcctgttagaccctccactctct
gccatgctaaacaagggtcgtctccgaatcggtgataagattgtgagcagtggagcagag
ttggttggttcccaagaagcctgtcctccactggaagctcctgaatctctgatgctcaag
atttcggctaacagcacaaggcgagctcggtgggacactaagttagggtactatcgtgac
cctcggcctatcagcctctcactatcgtcactgttcactactggaggtgttgtgagctgt
gtgaacattgtagtgttgagaagttaccccactcagtggatggagaagaggcccaacggt
gtctttatatttcgcaatgatcgtgcagaagatcgagaggccacaaaacacagtaacttc
aagcacaaatccatggatcttcttatttccaaaatgcagaccaaattcgaaaaagaaatg
gaaggtaaaaaaaaaagtcgaggccaaaggaggacatttagtcaacatgagattgaagct
ctgcaggatggggaggacttgtatgaggcaatggagagggatcctgctgttgaggcctat
ctaagtgcgagacagatggatgcagtgcataagtacagatgctgtttggaggaaaacagg
caggcagagcttcaggagcgtatgcagaaggctgtaatggaagcccaggcaactgatggt
gggtgtcctaatcgagatgtcactcctgtttggaagctcagcatttctgacgccaatgac
ctgcagagcaactgcgtttacaccctgaatatctggcgcccatcgcaagacctgtacggc
ttgctaagagagggcaacagatacagggcttatcacctcgccacatcagaggggaagaaa
cgctcaggcattgctcacattcagttcactgccaccaagaaaacattcttccaggaagtt
gaggtgtctccagaatggtcgcatctgcatttccgtgctcgagaatgtgtacgcttcaga
gaacttcaaaaccctcaattcttctcaccttgtggggaggtggacattgtgggatgtatc
gtctccatagagggaaaacaaggccatcccccattactgcatcttgtggatgagaacttt
gaccagatctctgtgagaacctacaatagtctggaacagttagctatagaagagctggta
aagctgagagcgctggttgctcttagtaatgttcagatgagaccgctctctggacctgta
ccaagcctttatgcaggagaacaagctgtgttctctgtaaaccccaaagaatcccatctg
caagaagctatgacctgtctaaagaactttgtccagacttgtgagagttttttcagcatt
gcagaggagaaggtctcagatgtggttccttcaggtgtcttgggttcttttcagtctcca
agaactcctgctgtgcagtctaatacaaaaatgaatggcagagtaaccccaaagcagaaa
agcagcgttttctcgcctttcactccactaaataggagaactcctgcgcctgcatgtacc
agcgagggaaaagatcccaaaagtttgaagagaagacgtggtttggattacctgtcacgt
atcccgtcccctccaccccttgctcctctgaaaactacagcttctccttgcattaacagg
accttcaatcccccacgaagatctgtgactcccaaacctccacagaacgagtcacctcga
acctcgcttcccccgctgggagaggagaagtgggtgcatgatgaagaactggtgatgata
gacacccaggcgttactggaaggctga
DBGET
integrated database retrieval system
