Puntigrus tetrazona (Sumatra barb): 122359564
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Entry
122359564 CDS
T08985
Symbol
hif1al
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha, like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04137
Mitophagy - animal
ptet04140
Autophagy - animal
ptet04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122359564 (hif1al)
04137 Mitophagy - animal
122359564 (hif1al)
04148 Efferocytosis
122359564 (hif1al)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptet03000
]
122359564 (hif1al)
Transcription factors [BR:
ptet03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
122359564 (hif1al)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
PAS
HIF-1
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
122359564
NCBI-ProteinID:
XP_043115842
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Position
15:complement(13982867..13995314)
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AA seq
633 aa
AA seq
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MVNSAMKRPSLEQRKVRSRVAARCRRSQETEVFYELAHSLPLPRRIASHLDKAAIMRVTL
SYLRMNRLIQSAGPTKTPTEETESPTDAFYQQALAGFILVMTEEGDMVFLSESVSKYIGI
TQLELLGQSVYEFVHPCDQEELRDILATRPGVSKKKTSSEKSTEHNFFLRMKSTLTHTGR
TVNIKSATWKVLHCTGHIQTFSGDDENGPPAGSFLTLLCEPIPHPSSVEFPLDSSTFLTR
HNMDLTFTQCDGRVTELVGYQPEDLIGRSAYEFYHALDFDHVTRSLHILFSKGQVCTSQY
RFLAKNGGFVWTETQATVLYNSRTSQPEAVVCLNFILSGVEEADVVFSLEQTSEKPKPKA
EKLNMLKEEVDSDMEEDSSTAKLFLQMKENPEELLQLAPHSGDAVVSLTDCVELSFCCPS
TPNSVPECPQDFCTPELRQLLSPIFDRPTKSPPTASPAEELPMEMEGVEKFFALKPEESV
TVKGQSEPMDELDLDMLAPYISMDDDFQLTFLPQGEMAIPSDILTSTSRKRPLEEEEEDD
IPVLAGKWEKKPMSGTIEEQLLLSHTLLNSLSDDGSEEFEPPPQKRSQLLTDRDPLLGGA
QTLCDTAALMRDTFLSRPPDLKRPVAETMPSLT
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggtgaactcggcaatgaaaaggcccagtttggagcagcggaaggtgcgttctcgtgtc
gcggcgcgctgtaggaggagtcaggagaccgaggtgttttacgagctggcccattcacta
ccacttccacgacgtatcgcctcccacctggacaaagctgccatcatgagggtgacactc
agctatctgcgcatgaaccgcttgatccaatcagcggggccaaccaaaactccgactgaa
gaaactgagagtcccactgatgccttttatcagcaggcactggctggctttattctggtg
atgactgaggaaggggacatggtcttcctctcagagagtgttagcaaatacatcggcata
acacagctggagctgcttggacagagcgtgtatgaatttgttcatccctgtgaccaagaa
gaattacgagacatcctcgccacaagacctggtgtttcaaagaaaaagacgtcaagtgag
aagtcaaccgaacataattttttccttcggatgaagagcacactcacccacacaggaaga
acagttaatatcaagtctgcaacctggaaggttcttcattgcacaggacacatacagacg
ttcagcggcgatgatgagaacgggccccctgctggcagcttcctgactctgctgtgtgaa
cccattcctcacccctccagcgttgaattcccactagacagcagcactttcctcacacgc
cataacatggatttgactttcacacaatgtgacggacgagtcactgagcttgttggatac
caacccgaagatctgattggccggtctgcctatgagttttatcacgcccttgattttgat
cacgtaaccaggagtttacacatcttgttctccaaaggccaggtgtgtaccagccagtac
cgcttcctggctaagaatggaggattcgtgtggactgagactcaggccactgtcctctac
aacagcaggacctctcaacccgaggctgtggtctgcctcaactttatcctcagtggtgta
gaagaggcggatgttgtgttctcattagaacagacctctgagaaaccaaagcccaaagct
gagaagctgaacatgctgaaggaggaggtggactcagacatggaagaggacagcagcacg
gccaaactcttcctccagatgaaggagaaccctgaggagttacttcagctggcacctcat
tctggagacgctgtcgtttccctaacagactgtgtggagttatccttctgctgtccatct
actcccaactctgtcccagaatgccctcaggacttctgtacacctgaactccgtcagctc
ctttctccaatattcgacaggcccaccaaatctccacccactgctagccccgctgaagag
ctgcccatggagatggaaggagtggagaagtttttcgccctcaaaccagaggagagcgta
actgtgaaaggacaatcagagcctatggatgagcttgatttggacatgctggctccgtat
atctccatggatgatgacttccagctgaccttcctgccccagggtgaaatggctataccg
tctgatatcctgaccagcacttcaaggaaacgacctttggaagaagaggaggaggatgac
attcctgttctggctggtaaatgggagaagaaaccgatgagcggcaccatagaagaacag
cttctgctcagccacacattactgaatagcttgtctgacgatggctcggaagaatttgaa
cccccacctcaaaagcgaagtcagctcttaaccgacagggacccgttgctgggcggagcg
cagacgttgtgtgatacagccgctctcatgagggacaccttcctgtcgcgtccgccggac
ttaaagagacccgttgctgaaacaatgccgtcccttacttga
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