Puntigrus tetrazona (Sumatra barb): 122359574
Help
Entry
122359574 CDS
T08985
Symbol
cltcb
Name
(RefSeq) clathrin, heavy chain b (Hc) isoform X1
KO
K04646
clathrin heavy chain
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04142
Lysosome
ptet04144
Endocytosis
ptet05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122359574 (cltcb)
04142 Lysosome
122359574 (cltcb)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
122359574 (cltcb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122359574 (cltcb)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptet04147
]
122359574 (cltcb)
Membrane trafficking [BR:
ptet04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
122359574 (cltcb)
Exosome [BR:
ptet04147
]
Exosomal proteins
Proteins found in most exosomes
122359574 (cltcb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
122359574
NCBI-ProteinID:
XP_043115858
LinkDB
All DBs
Position
15:10300340..10325420
Genome browser
AA seq
1685 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMSDPNT
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTEDVTFWKWISLNTV
ALVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAGFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPSG
NQPFPKKAVDVFFPPEAQNDFPVAMQISSKHDVVFLITKYGYIHLYDLEMGTCIYMNRIS
GETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAG
AEELFARKFNNLFAGGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQD
EEPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPTEGPLQTRLLEMNLMHAPQVADAI
LGNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLTELFESFKSFEGLFYFLGSIV
NFSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQ
FSTDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPY
YDSRVVGKYCEKRDPHLACVAYERGQCDQELIHVCNENSLFKSLSRYLVRRKDPELWASV
LLESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNT
SAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYME
VGQAAAQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQ
QVGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFA
CVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMM
NHPSDAWKESQFKDIITKVANVELYYKAVQFYLEFKPLLLNDLLIVLSPRLDHTRAVNFF
SKVKQLSLVKPYLRSVQNHNNKAVNEALNNLFITEEDYQALRTSIDAYDNFDNISLAQSL
EKHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLQWFLQ
EDKKECFAACLFTCYDLLRPDVVLETAWRHNLMDFSMPYFIQVMREYLSKVDAIKEKVDK
LDASESLRKEEEQLTEAQPIVYGTPQLMLTAGPNVAVPPQQPYGYGYPTATGYGQPAQPG
FGYGM
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaatcctgcctatccgcttccaggagcacctgcagctccagaacctgggcata
aacccagcgaacattgggtttagcaccctcacgatggagtcggataagttcatctgcatc
cgggagaaggtgggcgaacaggcccaggtggtgatcatcgacatgagcgatccaaacacg
cccatccgcaggcccatctccgcagacagtgccatcatgaacccagccagcaaagtcatt
gctcttaaagacgcggcaaaaacccttcagattttcaacattgaaatgaagagcaagatg
aaggcccacaccatgaccgaggacgttacattttggaagtggatctctctcaataccgta
gcactcgtgacagacaatgcggtctatcactggagtatggaaggagactcacagcccatc
aaagtctttgaccggcattccagtttagcaggctgtcaaattattaactaccgcactgac
gccaaacagaaatggctgcttctaattggaatttccgcacagcaaaaccgcgtcgtgggc
gcaatgcaactttactcggtggacagaaaggtgtcgcagccgatcgaaggccatgctgct
gggtttgctcagtttaaaatggagggaaacgctgaggaatccacacttttctgctttgct
gttcggggacaggctggaggaaagttgcacattattgaggttggaacacctccgtcaggt
aatcaaccctttccaaagaaagcagtcgacgtgtttttccctccagaggcccagaacgat
tttccggtcgcaatgcagataagctccaagcatgatgttgtctttctcatcaccaaatac
ggctacatccacttgtatgaccttgagatgggcacctgcatctacatgaaccggatcagt
ggagagaccatttttgtcaccgctcctcatgaagccacttctggcattattggtgtgaac
cggaagggacaggtgctgtctgtgtgcgtggaggaagaaaacatcatcccttacataact
aacgtgctgcagaaccctgatctggctctcaggatggccgttcgcaacaacttggcaggt
gccgaggagctcttcgcccgcaaattcaacaacctatttgctggtggcaactactctgaa
gctgccaaagtggctgccaatgcaccaaagggcatcctgcgcactccagacaccatccgt
cgtttccagagtgttcctgctcagcctggtcagacgtctcccctgctgcagtactttggg
attctgctggatcagggccagctgaacaagtttgagtcattggagctttgcaggcctgtc
ctgcagcaaggccgcaaacagctcctggagaaatggctgaaggaagacaagctggagtgc
tctgaagagttgggtgatctggtgaagtctgtggatccgactcttgcgcttagtgtttat
ctaagggccaatgttcccaacaaagtaatccagtgtttcgcggagaccggtcagttccag
aaaattgtactgtatgcaaaaaaggttggctacactccagactggatcttcctgttgagg
aacgtcatgcggatcagtccagaacaaggcctgcagttctcccaaatgctcgttcaggac
gaggaaccactggcagacatcactcagattgtggatgtgtttatggagtataacctgatc
cagcagtgcacttctttcctgttggatgccctgaagaacaaccgccccacagaaggtcct
ctgcagactcgtctgttggagatgaacttaatgcacgccccacaggtggcagatgccatc
ctgggaaaccagatgttcactcactacgaccgggctcatgtggctcagctgtgtgagaag
gcaggtcttctacagagagctctggagcactacactgacctgtatgacatcaaacgggcc
gtggtccacacccacctgctcaacccagagtggctggtgaacttcttcggctctctgtcg
gtggaggactctctggagtgtctgagagccatgctttctgctaacattagacagaacctc
cagatctgcgtacaggtggcctccaagtatcacgagcagctctccacccagtcactcaca
gagctctttgagtccttcaagagctttgagggtctgttctatttcctgggctccattgtg
aacttcagccaggatccagaggttcacttcaaatacatccaggctgcttgtaaaactggt
caaatcaaagaagtggagagaatctgcagagagagcaactgttacgatcctgagcgtgtg
aagaatttcctcaaggaagcaaaactgaccgaccagctgcccctcatcattgtgtgtgac
cgctttgactttgtccatgaccttgtgctctacttgtaccgcaacaacctgcagaagtac
atcgagatctatgttcagaaggtgaaccccagccgtttacctgtggtgattggagggttg
ctggacgtggattgctctgaggacgtcattaagaacctcattctggtggtcagaggccag
ttctccactgatgagcttgtggccgaggtggagaagagaaacagactgaagctgcttctg
ccgtggttggaggcccgtatccacgagggctgtgaggaacctgctacccataatgcactg
gctaaaatctacatcgacagcaacaacaaccctgagcgttttctcagagagaacccctac
tatgacagtcgcgtggtgggcaaatactgcgagaagagagacccccatctggcctgtgtg
gcttacgagagaggacagtgtgaccaagagctcatccatgtttgcaatgagaactcgctc
ttcaagagtttgtcccgataccttgtgcgtcgtaaggaccccgagctgtgggctagtgtg
cttctggagagcaacccttacaggagacccctaatcgaccaggttgttcagactgccctt
tctgagactcaggaccctgaggaagtgtctgttactgtcaaagctttcatgactgctgac
ctacccaatgaactcattgaacttttggagaagattgttctggacaactccgttttcagc
gaacacaggaacctgcagaacctcctgatcctgacggccatcaaagctgaccgcactcgt
gtcatggagtacatcaaccgcctcgacaactacgacgctccagacatcgctaacatcgcc
attagcaatgagctcttcgaggaagcttttgcgatcttcaggaagttcgatgtaaacaca
tcagcagtgcaggttcttattgagcacattgggaatctggaccgagcctatgagtttgct
gagcgctgtaatgagccggccgtgtggagtcagctggctaaagcacagctgcagaaggga
ctggtgaaagaggccattgactcttacatcaaagctgacgacccctcggcctacatggaa
gtgggacaggctgcagcccaaagtggaaactgggaggatctggtcaagtttctgcagatg
gctcgtaagaaggcccgtgaatcgtatgtagagacggagctgatctttgcactggccaag
accaaccgtctggctgaactggaggagtttatcaatgggccaaacaacgcacacattcag
caagttggtgaccgatgctatgatgagaagatgtacgaggcagctaaactactatataac
aatgtatccaactttggccgtctggcctcgactctggtgcatcttggcgagtatcaggct
gctgtcgatggggcccgcaaagccaacagcacaaggacctggaaagaggtttgctttgcc
tgtgttgatgggaaggagtttcgtctggctcagatgtgtggattgcatattgtcgttcat
gctgatgaactggaggagctcatcaactactaccaggaccgtggctatttcgaggagctg
atcaccatgttggaggcggcactagggctggagcgtgctcacatgggcatgttcacagaa
ctggccatcctatactccaaattcaaaccacagaagatgagggagcacctggagctgttc
tggtccagagtcaacattcccaaggttttgagggcagcagagcaggctcacctgtgggcg
gaactagtcttcctgtatgataagtatgaggagtatgacaacgccatcatcaccatgatg
aaccatccttcagatgcctggaaagagagccagttcaaggacatcataaccaaggttgct
aatgttgagctgtattacaaagccgtccaattctacctggagttcaaaccgctgttactg
aatgacctgttgatcgtattgtctccacgtcttgaccacactcgtgccgtcaacttcttc
agcaaggtcaagcaattgtcgttggtaaaaccatacctgaggtctgtacagaaccacaac
aacaaggctgtaaatgaggcacttaataatctcttcatcaccgaggaggattaccaggct
ctgcgcacatccatcgatgcctacgataacttcgacaacatatctctggctcagagcctg
gagaagcacgaactcatcgagttcaggcgaattgccgcctacctgttcaaaggcaacaat
cgctggaagcagagcgtggagctctgcaagaaagacaaactctacaaggacgcaatgcag
tatgcctcagagtcaaaggacacagagctggctgaggagctgctgcagtggttcttgcag
gaagacaagaaagagtgttttgccgcctgcctgttcacttgctacgacctgctgaggccc
gatgtggtgctggagaccgcgtggaggcacaacctcatggacttctccatgccctacttc
attcaggtcatgagggaataccttagcaaggttgatgcaattaaggaaaaggttgacaag
ttggatgcttcagagtctttgaggaaagaggaagagcagctcacagaggcacaacccatt
gtctatggcacaccccagctgatgctcaccgcaggccccaacgtcgcagttcccccacag
cagccttacggctacggctaccccacggcgactggctatggccaacccgcacagccaggc
ttcggctacggcatgtaa
DBGET
integrated database retrieval system
