Puntigrus tetrazona (Sumatra barb): 122360075
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Entry
122360075 CDS
T08985
Symbol
nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04621
NOD-like receptor signaling pathway
ptet05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122360075 (nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122360075 (nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ptet04054
]
122360075 (nod1)
Pattern recognition receptors [BR:
ptet04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
122360075 (nod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
CARD
NOD2_WH
LRR_6
LRR_4
AAA_16
AAA_22
NTPase_1
AAA_18
SLFN-g3_helicase
AAA_30
Motif
Other DBs
NCBI-GeneID:
122360075
NCBI-ProteinID:
XP_043116333
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All DBs
Position
16:27579339..27587334
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AA seq
937 aa
AA seq
DB search
MGSRGRAGSHLRLLTSHRELLVEQVKNTQCILDNLQLNGFICTEDVEIIQRGGTKTEQVR
KILELVQSKGEECSAYFIHILHEAYDAYIDLRPWFEEIQYIPLDTISVIPVVNTDPISKY
CEKLRYELGRDTRFITSYSKSEETLLEDLYTDTQMELLNDRGESLGYLQSLDELLGEQGV
FNPQAETIFITGDAGVGKSIVLQKLQNLWSRRDLKTRAKFFFKFRCRMFSAFKETDEISL
KDLIFKHNCYPDGDLDNEVFTYILRFPETVLFTFDGYDEIQADFDLDNVPETVSPEEKTR
PLLLLMNLLCGKLLKGSRKILTARSGTEVQSRVILKKVYLKGFSPEHLKRYTALHFPEKE
HKTMVTDQLDANPHLCGLCSIPLFSWIILKSFKHLHSVYENFELPDSCITLTNVFLLLSE
VFLGHSIARPGLLKRSTRCPAETFKAGERKLSAFSRLALHGLERGGLVFSMEEVISCGLE
DEDLQFGFLRPASHYDGCGSSATFEFLHETLQAFLAAFSLVLDSKTTPESILRFFSKCEY
KRSSRLSCLPCLGKPRPRDKDPFQTNFQFTNLFLCGLLSKPNSALLEHLVPPVLLKQKRK
MLKSYLSNSVKTHLKGLPRYPSTDIKGDKVHAMPNFLWMLRCIFETNSEDVAKMTANGIS
AEYIKIAFCNIYSADCSALNFVLHHRRKQLGVDMDNNNINDYGVKQLRPSFSKMTVVRLC
VNQLTDSSIEVLAEELIRHKIIKVLGLYKNYITDVGAKQVAKIIEECPHLKVVKLGCNNI
TGVGGKHLADAIHKSKSIFDVGMWGNTIGDEGADAFAEALKNHPSLTNLSLSANGITAHG
GRSLAKALKENTSLHIFWLIQNKISDDAASDFAEAFRSNSTLTHLMLIENEFTINGAKQM
SEGLTTNTTLKEVNIKGSSVSEEEERLYEGDKRLRFH
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgggctcgcgcgggcgcgcggggtctcacctgaggctgctgacgtcacaccgcgagctg
ctggtggagcaggtgaagaacacgcagtgcattctggacaatctccagctgaacggcttc
atctgtaccgaagacgtcgagatcatccagcgcggcggcaccaagaccgagcaggttcgc
aaaatcctggagctggttcagagtaaaggagaggagtgctcagcatatttcatacacatt
cttcatgaagcatatgacgcttacatcgatctgcggccatggttcgaagaaattcagtac
ataccactggacactatcagcgtcataccagtggttaacaccgaccccattagcaagtac
tgtgagaagctgagatacgagctgggaagagacactcgattcatcacatcgtactcgaag
agcgaggagacgctgctggaggatctttacacggacactcagatggagctcctgaacgac
agaggcgagagtctgggatacttacagagtctggatgagcttctgggagagcagggagtc
ttcaacccacaggccgagaccatcttcatcaccggagacgctggcgtgggcaaatccatc
gtccttcagaagctgcagaacctgtggtccagacgagatctaaaaacacgtgccaagttc
ttcttcaagttcagatgcaggatgttcagcgcctttaaggaaacggacgagatctcgcta
aaggatctgatctttaaacacaactgctacccagacggcgatctcgacaacgaggtcttc
acctacatcctgcgattcccagaaacggtgcttttcacttttgacgggtatgatgaaatc
caagcggattttgacttggataacgtgccggagaccgtttccccggaagaaaagacccgt
ccgcttttgcttctcatgaacttgctttgcgggaaactgctcaagggttcccggaagatt
ctgacggcgcgaagcggcaccgaagtccaaagcagagtgatcctgaagaaagtctacttg
aagggattctcacccgaacacctgaagagatacacggctttgcatttcccagagaaggaa
cacaagacgatggtcaccgatcagctggacgccaatcctcatctctgcggtctttgctcc
attccactgttcagctggatcatcctcaagagcttcaagcatcttcattcggtctatgaa
aactttgagttgccggattcttgcatcacgctcacaaacgtcttcttgcttctctctgag
gtctttctcggacactcgatcgcacgtcctggacttttaaaacgaagtacgaggtgtcca
gcggagacctttaaagctggtgagcgaaagctttcggctttttctcgactggccttgcat
ggtctagaacggggaggacttgtgttcagtatggaggaagtaatatcctgtgggttagaa
gacgaagaccttcagtttggcttcctgaggcctgcttcacattacgatggatgcggaagc
tctgcaaccttcgagttcctccacgagacgctccaggccttcttagctgcgttttcattg
gtgctggactccaaaaccactcctgaatctattctgaggttcttctccaaatgcgagtac
aagaggtcgtcgcgtctctcctgcttgccttgtctgggaaagccgagacctagagataaa
gaccctttccaaaccaacttccagttcaccaatttatttctatgcggcctgttgtccaaa
cccaactctgctcttctggagcatctcgttcctccggtgttgttgaagcaaaagcgcaag
atgctcaagtcttacctatccaacagcgtgaagacgcatcttaaaggtcttcctcggtat
ccatccacagacatcaagggcgacaaggtgcatgcgatgccaaacttcttgtggatgctg
cggtgcatattcgagacgaacagcgaggatgttgccaagatgacagccaatggcatttcg
gcggagtacattaagatcgccttctgtaacatttactcagccgattgcagcgccttgaac
tttgtcctccaccatcgtaggaagcagctaggagtcgatatggacaataacaacatcaat
gattatggcgtgaagcaactgaggccctctttcagcaaaatgacggtagtaagactttgc
gtgaatcagctgacggacagcagtattgaggttctggcagaggaactgatcagacacaaa
atcattaaagtcttgggtctttacaaaaactacatcacagacgttggagccaaacaagta
gcaaagattattgaagaatgtccacacttgaaggttgtcaagctcggctgcaacaacatc
acaggtgtgggtggaaaacacctggccgatgccatccacaagagcaaatctatcttcgat
gtgggaatgtggggaaacaccattggagacgagggagcagatgctttcgcggaggctctg
aagaatcacccaagcctgaccaacctcagtctctcggccaatggcattacggctcacggt
ggacgaagtctggcgaaagcactgaaggaaaacacaagccttcacatcttctggttgata
cagaacaaaatctctgatgatgcagcgtcagacttcgcggaggccttcagatctaactct
actctgacacatctgatgctgatagaaaatgagttcaccattaatggagccaaacagatg
tctgaaggcctgactaccaacactacgctgaaggaagtcaatattaaaggaagcagcgtc
tcagaagaagaagagcgactctacgagggcgacaagaggcttcgcttccactga
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