Puntigrus tetrazona (Sumatra barb): 122360121
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Entry
122360121 CDS
T08985
Symbol
prdm13
Name
(RefSeq) PR domain zinc finger protein 13
KO
K24645
PR domain zinc finger protein 13 [EC:2.1.1.-]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptet03000
]
122360121 (prdm13)
Transcription factors [BR:
ptet03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
122360121 (prdm13)
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Ortholog
Paralog
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GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_7th_ZNF462
zf-BED
zf-C2H2_15
GPS2_interact
Zf-C2H2_ZNF451
C2CH-3rd_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
122360121
NCBI-ProteinID:
XP_043116404
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Position
16:23623739..23628860
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AA seq
611 aa
AA seq
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MQAPRTPTISVFADCSIPAGLRIGPVPGIFKLGKYVSDRKEAGVKKKVRLVRGEFVDESG
SAVPDWIGLIRAARNSQEQNLEAVSDLPGGQIFYRVLREIQAGEELSVWYSSALAQWFDI
PTTATPTHDEKGEERYICWYCWRIFKYPNTLKAHVHFHCALSNGRSLVSNEQARGTDNFN
RSPKSGDIPNASSSPRNGHSTFMPDAVKRVVSTPPFANKVGLTKKPSAEEQDRALDMSVT
SARSTGHILGLGGTSSVLNSMGFHPGVRSAFKPMGLSKISPADVARDEANGKPNSMGFGK
LLGNIKSPLPSVHPSKCAHPMESSPPVIPCANNIRGFPLLPHFEETSAFKHVDSRMHPAL
SPSRYSQLPAGFHFERFSLPQFDGGKSYNGDCNIPLMPFTVYNGELLYSSPYYPLKFHFG
NLLKYPDYFGAPALNPDLNAITNIDREIAMHTQQLSEIAVEKNRSRLESLPASNPNSGKP
KKGHLCLYCGKLYSRKYGLKIHMRTHTGYKPLKCKVCFRPFGDPSNLNKHIRLHAEGNTP
YRCEFCGKVLVRRRDLERHVKSRHPGQSIKKSDDKIEGIFEDGEQKSDNDSDVDVCFTDD
QSDQESSKHND
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcgcctcggacacccactatcagcgtgttcgccgactgcagcatcccagccggg
cttcggataggaccggtcccgggcatcttcaaactggggaagtatgtttcggaccgcaag
gaagctggagtgaaaaagaaggttcgtttggtgaggggagaattcgtggatgaatccggc
agcgcggttccggattggatcggtttaatacgcgcggccaggaacagtcaagaacagaac
ctcgaggccgtctcggatttacctggaggacagattttctaccgcgtgctgagagaaata
caggctggagaagagctgagtgtgtggtattccagcgcgctggcgcagtggttcgacatt
cccacgacggctactccgacacacgacgaaaaaggagaggagcgctacatttgctggtac
tgctggagaatattcaaatacccgaacaccctgaaagctcacgtgcatttccactgtgcg
ttgagcaacggcagaagtttggtgagcaacgagcaagctagaggcacggacaactttaac
agatctccgaaatcaggggacatcccaaacgcgtcctcctctccgcggaacggccacagc
acctttatgccggacgcggtgaaacgggtcgtgtccaccccacctttcgccaataaagtg
ggactaacgaaaaaaccgagcgcggaggagcaggacagagcccttgacatgagcgtgacc
tccgccagaagcaccggacacatactgggcctcggcgggacatcctctgtgctcaacagc
atgggtttccacccaggcgtgcgctctgctttcaaaccaatgggactttcgaagatctcc
ccggccgatgtcgcgagagacgaggctaacgggaaaccaaacagtatggggttcggcaag
ctactggggaacatcaagtcacctctacctagcgtgcatccctcaaaatgcgcgcacccc
atggagagctcgcctcccgtgatcccctgcgcgaacaacatccgcggctttcctctgctg
ccccatttcgaggagacgtccgctttcaagcacgtggacagccgcatgcaccccgccctg
tccccctcgcgctactcccagcttccggccggctttcacttcgagaggttctccttgcca
cagttcgacggggggaaatcctacaacggggactgcaacatacccctcatgccgttcacc
gtttacaacggagagctcctttatagctccccgtactaccctcttaaatttcacttcggc
aacctgcttaaatacccagactacttcggcgcaccggctctgaatccagatctaaacgcc
ataacgaacatcgacagggagatagcgatgcacacgcaacagctgtccgaaatcgccgta
gagaagaaccgttcacgactggagtctctgcccgcgtccaaccccaactcgggcaagcca
aaaaagggacatctgtgcctatactgcggcaaactgtactctcgaaaatacggtctgaag
attcacatgaggactcacacgggctacaaaccgctcaaatgtaaagtgtgcttcaggccc
ttcggcgaccccagcaatctcaacaaacacatcagactgcacgcggagggaaacacgccc
tacaggtgcgagttctgcgggaaggtgctcgtgcgcaggcgggatttggagaggcacgtc
aaatcgaggcatccgggtcagagcatcaaaaagtccgacgacaaaatcgagggcatcttc
gaggacggcgaacaaaaaagcgacaacgacagcgacgtcgacgtctgcttcacggacgac
cagagcgaccaggaatcgagcaaacacaatgattaa
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